RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 PLEKHO1Q53GL0 409 aaPredicted RBP19.98■□□□□ 0.79
GARNL3-204ENST00000429629 CCDC125Q86Z20 511 aa19.98■□□□□ 0.79
GARNL3-204ENST00000429629 MARCH10Q8NA82 808 aaPredicted RBP19.98■□□□□ 0.79
GARNL3-204ENST00000429629 MEGF6O75095 1541 aa19.97■□□□□ 0.79
GARNL3-204ENST00000429629 AEBP1Q8IUX7 1158 aa19.97■□□□□ 0.79
GARNL3-204ENST00000429629 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
GARNL3-204ENST00000429629 PARP4Q9UKK3 1724 aaKnown RBP19.96■□□□□ 0.79
GARNL3-204ENST00000429629 U2AF1L5P0DN76 240 aaPredicted RBP19.96■□□□□ 0.79
GARNL3-204ENST00000429629 U2AF1Q01081 240 aaKnown RBP eCLIP19.96■□□□□ 0.79
GARNL3-204ENST00000429629 NKX1-1Q15270 411 aaPredicted RBP19.96■□□□□ 0.79
GARNL3-204ENST00000429629 PCDH11XQ9BZA7 1347 aa19.96■□□□□ 0.79
GARNL3-204ENST00000429629 PCDH11YQ9BZA8 1340 aa19.96■□□□□ 0.79
GARNL3-204ENST00000429629 HMOX1P09601 288 aa19.94■□□□□ 0.78
GARNL3-204ENST00000429629 RSPH6AQ9H0K4 717 aa19.94■□□□□ 0.78
GARNL3-204ENST00000429629 RGPD1P0DJD0 1748 aa19.93■□□□□ 0.78
GARNL3-204ENST00000429629 IFNL2Q8IZJ0 200 aa19.93■□□□□ 0.78
GARNL3-204ENST00000429629 DDX54Q8TDD1 881 aaKnown RBP19.93■□□□□ 0.78
GARNL3-204ENST00000429629 CYP27B1O15528 508 aa19.92■□□□□ 0.78
GARNL3-204ENST00000429629 HSP90AB1P08238 724 aaKnown RBP19.92■□□□□ 0.78
GARNL3-204ENST00000429629 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
GARNL3-204ENST00000429629 SOCS7O14512 581 aa19.9■□□□□ 0.78
GARNL3-204ENST00000429629 PHKG2P15735 406 aa19.9■□□□□ 0.78
GARNL3-204ENST00000429629 LRRC37A3O60309 1634 aa19.89■□□□□ 0.77
GARNL3-204ENST00000429629 PRKAR2BP31323 418 aa19.89■□□□□ 0.77
GARNL3-204ENST00000429629 WDR43Q15061 677 aaKnown RBP eCLIP19.89■□□□□ 0.77
GARNL3-204ENST00000429629 GAS2L2Q8NHY3 880 aa19.89■□□□□ 0.77
GARNL3-204ENST00000429629 UPF1Q92900 1129 aaKnown RBP eCLIP19.89■□□□□ 0.77
GARNL3-204ENST00000429629 AKAP4Q5JQC9 854 aa19.88■□□□□ 0.77
GARNL3-204ENST00000429629 PLEKHF1Q96S99 279 aa19.88■□□□□ 0.77
GARNL3-204ENST00000429629 BCL11BQ9C0K0 894 aaPredicted RBP19.88■□□□□ 0.77
GARNL3-204ENST00000429629 CCER2I3L3R5 266 aa19.87■□□□□ 0.77
GARNL3-204ENST00000429629 NEFMP07197 916 aa19.87■□□□□ 0.77
GARNL3-204ENST00000429629 FAM182BQ5T319 152 aa19.87■□□□□ 0.77
GARNL3-204ENST00000429629 PNISRQ8TF01 805 aaKnown RBP19.87■□□□□ 0.77
GARNL3-204ENST00000429629 RGPD2P0DJD1 1756 aa19.87■□□□□ 0.77
GARNL3-204ENST00000429629 MTHFSDQ2M296 383 aaKnown RBP19.86■□□□□ 0.77
GARNL3-204ENST00000429629 C1orf141Q5JVX7 400 aa19.86■□□□□ 0.77
GARNL3-204ENST00000429629 ZNF530Q6P9A1 599 aaPredicted RBP19.86■□□□□ 0.77
GARNL3-204ENST00000429629 DCAF5Q96JK2 942 aa19.86■□□□□ 0.77
GARNL3-204ENST00000429629 MRS2Q9HD23 443 aa19.86■□□□□ 0.77
GARNL3-204ENST00000429629 ADAMTS8Q9UP79 889 aa19.86■□□□□ 0.77
GARNL3-204ENST00000429629 WNK3Q9BYP7 1800 aa19.86■□□□□ 0.77
GARNL3-204ENST00000429629 PHACTR3Q96KR7 559 aa19.85■□□□□ 0.77
GARNL3-204ENST00000429629 ERVV-2B6SEH9 535 aa19.84■□□□□ 0.77
GARNL3-204ENST00000429629 HTATSF1O43719 755 aaKnown RBP19.84■□□□□ 0.77
GARNL3-204ENST00000429629 CCDC184Q52MB2 194 aa19.84■□□□□ 0.77
GARNL3-204ENST00000429629 BRWD3Q6RI45 1802 aa19.83■□□□□ 0.76
GARNL3-204ENST00000429629 TRIM37O94972 964 aa19.82■□□□□ 0.76
GARNL3-204ENST00000429629 SF3B2Q13435 895 aaKnown RBP19.82■□□□□ 0.76
GARNL3-204ENST00000429629 PKD1L3Q7Z443 1732 aa19.82■□□□□ 0.76
GARNL3-204ENST00000429629 GNAT3A8MTJ3 354 aa19.81■□□□□ 0.76
GARNL3-204ENST00000429629 PLSCR1O15162 318 aa19.81■□□□□ 0.76
GARNL3-204ENST00000429629 RUNDC1Q96C34 613 aa19.81■□□□□ 0.76
GARNL3-204ENST00000429629 EP400Q96L91 3159 aa19.81■□□□□ 0.76
GARNL3-204ENST00000429629 PRIM1P49642 420 aaKnown RBP19.8■□□□□ 0.76
GARNL3-204ENST00000429629 MAPK8IP3Q9UPT6 1336 aa19.79■□□□□ 0.76
GARNL3-204ENST00000429629 NCBP3Q53F19 620 aaKnown RBP19.79■□□□□ 0.76
GARNL3-204ENST00000429629 KCNQ2O43526 872 aa19.78■□□□□ 0.76
GARNL3-204ENST00000429629 NFE2L2Q16236 605 aa19.78■□□□□ 0.76
GARNL3-204ENST00000429629 RNMTO43148 476 aaKnown RBP19.77■□□□□ 0.76
GARNL3-204ENST00000429629 BAG6P46379 1132 aa19.77■□□□□ 0.76
GARNL3-204ENST00000429629 ACSBG1Q96GR2 724 aa19.77■□□□□ 0.76
GARNL3-204ENST00000429629 MAP3K5Q99683 1374 aa19.77■□□□□ 0.76
GARNL3-204ENST00000429629 APBA3O96018 575 aa19.76■□□□□ 0.75
GARNL3-204ENST00000429629 HMGB2P26583 209 aaKnown RBP19.76■□□□□ 0.75
GARNL3-204ENST00000429629 MPRIPQ6WCQ1 1025 aa19.76■□□□□ 0.75
GARNL3-204ENST00000429629 IL17REQ8NFR9 667 aa19.75■□□□□ 0.75
GARNL3-204ENST00000429629 SHANK3Q9BYB0 1731 aa19.74■□□□□ 0.75
GARNL3-204ENST00000429629 CEMIPQ8WUJ3 1361 aa19.74■□□□□ 0.75
GARNL3-204ENST00000429629 TMPOP42166 694 aaKnown RBP19.74■□□□□ 0.75
GARNL3-204ENST00000429629 CABP4P57796 275 aa19.74■□□□□ 0.75
GARNL3-204ENST00000429629 PIGBQ92521 554 aa19.74■□□□□ 0.75
GARNL3-204ENST00000429629 RTF1Q92541 710 aaKnown RBP19.74■□□□□ 0.75
GARNL3-204ENST00000429629 LGR6Q9HBX8 967 aa19.74■□□□□ 0.75
GARNL3-204ENST00000429629 TMOD3Q9NYL9 352 aa19.74■□□□□ 0.75
GARNL3-204ENST00000429629 KDM6AO15550 1401 aaPredicted RBP19.74■□□□□ 0.75
GARNL3-204ENST00000429629 LMOD3Q0VAK6 560 aa19.73■□□□□ 0.75
GARNL3-204ENST00000429629 PTF1AQ7RTS3 328 aa19.73■□□□□ 0.75
GARNL3-204ENST00000429629 MIER1Q8N108 512 aa19.73■□□□□ 0.75
GARNL3-204ENST00000429629 SMARCC1Q92922 1105 aaPredicted RBP19.73■□□□□ 0.75
GARNL3-204ENST00000429629 SYTL4Q96C24 671 aaPredicted RBP19.73■□□□□ 0.75
GARNL3-204ENST00000429629 CAMKK2Q96RR4 588 aa19.73■□□□□ 0.75
GARNL3-204ENST00000429629 SLC52A2Q9HAB3 445 aa19.73■□□□□ 0.75
GARNL3-204ENST00000429629 NGEFQ8N5V2 710 aa19.72■□□□□ 0.75
GARNL3-204ENST00000429629 RIPK4P57078 832 aa19.71■□□□□ 0.75
GARNL3-204ENST00000429629 NFATC2IPQ8NCF5 419 aa19.71■□□□□ 0.75
GARNL3-204ENST00000429629 CCDC146Q8IYE0 955 aa19.7■□□□□ 0.74
GARNL3-204ENST00000429629 SLC27A3Q5K4L6 730 aa19.69■□□□□ 0.74
GARNL3-204ENST00000429629 APAF1O14727 1248 aa19.68■□□□□ 0.74
GARNL3-204ENST00000429629 EN1Q05925 392 aaPredicted RBP19.68■□□□□ 0.74
GARNL3-204ENST00000429629 TEFQ10587 303 aa19.68■□□□□ 0.74
GARNL3-204ENST00000429629 DEFB132Q7Z7B7 95 aa19.68■□□□□ 0.74
GARNL3-204ENST00000429629 NHSQ6T4R5 1651 aa19.68■□□□□ 0.74
GARNL3-204ENST00000429629 CCDC27Q2M243 656 aa19.67■□□□□ 0.74
GARNL3-204ENST00000429629 PROM2Q8N271 834 aa19.67■□□□□ 0.74
GARNL3-204ENST00000429629 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
GARNL3-204ENST00000429629 BABAM1Q9NWV8 329 aa19.67■□□□□ 0.74
GARNL3-204ENST00000429629 TAF7Q15545 349 aaPredicted RBP19.66■□□□□ 0.74
GARNL3-204ENST00000429629 TXNRD1Q16881 649 aa19.66■□□□□ 0.74
GARNL3-204ENST00000429629 FAM9BQ8IZU0 186 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms