RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PSME1Q06323 249 aa16.54■□□□□ 0.24
MCF2L-213ENST00000421756 PHAXQ9H814 394 aaKnown RBP16.54■□□□□ 0.24
MCF2L-213ENST00000421756 CHL1O00533 1208 aa16.53■□□□□ 0.24
MCF2L-213ENST00000421756 LARP6Q9BRS8 491 aaKnown RBP16.53■□□□□ 0.24
MCF2L-213ENST00000421756 BMP2KLQ5H9B9 411 aa16.53■□□□□ 0.24
MCF2L-213ENST00000421756 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
MCF2L-213ENST00000421756 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.24
MCF2L-213ENST00000421756 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.24
MCF2L-213ENST00000421756 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.24
MCF2L-213ENST00000421756 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
MCF2L-213ENST00000421756 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.24
MCF2L-213ENST00000421756 KCNQ3O43525 872 aa16.52■□□□□ 0.23
MCF2L-213ENST00000421756 CDC45O75419 566 aa16.52■□□□□ 0.23
MCF2L-213ENST00000421756 SDSP20132 328 aa16.52■□□□□ 0.23
MCF2L-213ENST00000421756 GAS2L2Q8NHY3 880 aa16.52■□□□□ 0.23
MCF2L-213ENST00000421756 ABCC4O15439 1325 aa16.51■□□□□ 0.23
MCF2L-213ENST00000421756 SSFA2P28290 1259 aa16.51■□□□□ 0.23
MCF2L-213ENST00000421756 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
MCF2L-213ENST00000421756 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
MCF2L-213ENST00000421756 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
MCF2L-213ENST00000421756 TNPO1Q92973 898 aaKnown RBP16.51■□□□□ 0.23
MCF2L-213ENST00000421756 LGR6Q9HBX8 967 aa16.51■□□□□ 0.23
MCF2L-213ENST00000421756 CHMP4BQ9H444 224 aaKnown RBP16.5■□□□□ 0.23
MCF2L-213ENST00000421756 PNMA6EA0A0J9YXQ4 647 aa16.5■□□□□ 0.23
MCF2L-213ENST00000421756 LRRFIP2Q9Y608 721 aaKnown RBP16.5■□□□□ 0.23
MCF2L-213ENST00000421756 CCDC9Q9Y3X0 531 aaKnown RBP16.49■□□□□ 0.23
MCF2L-213ENST00000421756 FLIIQ13045 1269 aa16.49■□□□□ 0.23
MCF2L-213ENST00000421756 HDGFL1Q5TGJ6 251 aa16.49■□□□□ 0.23
MCF2L-213ENST00000421756 ARHGAP45Q92619 1136 aa16.49■□□□□ 0.23
MCF2L-213ENST00000421756 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
MCF2L-213ENST00000421756 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-213ENST00000421756 ZC3H6P61129 1189 aaKnown RBP16.49■□□□□ 0.23
MCF2L-213ENST00000421756 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-213ENST00000421756 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
MCF2L-213ENST00000421756 DCTPP1Q9H773 170 aa16.48■□□□□ 0.23
MCF2L-213ENST00000421756 ATP7BP35670 1465 aa16.48■□□□□ 0.23
MCF2L-213ENST00000421756 OS9Q13438 667 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-213ENST00000421756 PKP1Q13835 747 aa16.48■□□□□ 0.23
MCF2L-213ENST00000421756 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
MCF2L-213ENST00000421756 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
MCF2L-213ENST00000421756 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
MCF2L-213ENST00000421756 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
MCF2L-213ENST00000421756 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
MCF2L-213ENST00000421756 ORAI2Q96SN7 254 aa16.47■□□□□ 0.23
MCF2L-213ENST00000421756 ANO2Q9NQ90 1003 aa16.47■□□□□ 0.23
MCF2L-213ENST00000421756 JARID2Q92833 1246 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-213ENST00000421756 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
MCF2L-213ENST00000421756 TTC22Q5TAA0 569 aa16.47■□□□□ 0.23
MCF2L-213ENST00000421756 PLEKHG3A1L390 1219 aa16.46■□□□□ 0.23
MCF2L-213ENST00000421756 HOXC9P31274 260 aa16.46■□□□□ 0.23
MCF2L-213ENST00000421756 UPF3BQ9BZI7 483 aaKnown RBP16.46■□□□□ 0.23
MCF2L-213ENST00000421756 KIF2CQ99661 725 aa16.46■□□□□ 0.23
MCF2L-213ENST00000421756 PTPRUQ92729 1446 aa16.46■□□□□ 0.22
MCF2L-213ENST00000421756 ZGPATQ8N5A5 531 aaKnown RBP16.46■□□□□ 0.22
MCF2L-213ENST00000421756 SURF6O75683 361 aaKnown RBP16.45■□□□□ 0.22
MCF2L-213ENST00000421756 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
MCF2L-213ENST00000421756 K7ELQ4 463 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-213ENST00000421756 GNAI2P04899 355 aa16.44■□□□□ 0.22
MCF2L-213ENST00000421756 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
MCF2L-213ENST00000421756 INTS3Q68E01 1043 aaKnown RBP16.44■□□□□ 0.22
MCF2L-213ENST00000421756 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
MCF2L-213ENST00000421756 USP6P35125 1406 aa16.44■□□□□ 0.22
MCF2L-213ENST00000421756 PRAMEF22A3QJZ6 481 aa16.44■□□□□ 0.22
MCF2L-213ENST00000421756 HMMRO75330 724 aa16.44■□□□□ 0.22
MCF2L-213ENST00000421756 TEFQ10587 303 aa16.44■□□□□ 0.22
MCF2L-213ENST00000421756 ADAMTS13Q76LX8 1427 aa16.44■□□□□ 0.22
MCF2L-213ENST00000421756 CASC1Q6TDU7 716 aa16.44■□□□□ 0.22
MCF2L-213ENST00000421756 NEK4P51957 841 aa16.43■□□□□ 0.22
MCF2L-213ENST00000421756 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
MCF2L-213ENST00000421756 XRCC6P12956 609 aaKnown RBP eCLIP16.43■□□□□ 0.22
MCF2L-213ENST00000421756 AATKQ6ZMQ8 1374 aa16.43■□□□□ 0.22
MCF2L-213ENST00000421756 MED14O60244 1454 aa16.43■□□□□ 0.22
MCF2L-213ENST00000421756 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
MCF2L-213ENST00000421756 USP32Q8NFA0 1604 aa16.43■□□□□ 0.22
MCF2L-213ENST00000421756 UBTFL1P0CB47 393 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-213ENST00000421756 CCDC30Q5VVM6 783 aa16.42■□□□□ 0.22
MCF2L-213ENST00000421756 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-213ENST00000421756 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-213ENST00000421756 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-213ENST00000421756 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
MCF2L-213ENST00000421756 CHPF2Q9P2E5 772 aa16.42■□□□□ 0.22
MCF2L-213ENST00000421756 CDK12Q9NYV4 1490 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-213ENST00000421756 RBM25P49756 843 aaKnown RBP16.42■□□□□ 0.22
MCF2L-213ENST00000421756 DDX49Q9Y6V7 483 aaKnown RBP16.42■□□□□ 0.22
MCF2L-213ENST00000421756 UNC5CLQ8IV45 518 aa16.41■□□□□ 0.22
MCF2L-213ENST00000421756 CABLES1Q8TDN4 633 aa16.41■□□□□ 0.22
MCF2L-213ENST00000421756 PI4KAP2A4QPH2 592 aa16.41■□□□□ 0.22
MCF2L-213ENST00000421756 PI4KAP1Q8N8J0 262 aa16.41■□□□□ 0.22
MCF2L-213ENST00000421756 FLT4P35916 1363 aa16.4■□□□□ 0.22
MCF2L-213ENST00000421756 PIK3R4Q99570 1358 aa16.4■□□□□ 0.22
MCF2L-213ENST00000421756 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
MCF2L-213ENST00000421756 HAP1P54257 671 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-213ENST00000421756 PDE1AP54750 535 aa16.4■□□□□ 0.22
MCF2L-213ENST00000421756 SLC39A6Q13433 755 aa16.4■□□□□ 0.22
MCF2L-213ENST00000421756 NBPF7P0C2Y1 421 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-213ENST00000421756 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-213ENST00000421756 LRRCC1Q9C099 1032 aa16.39■□□□□ 0.21
MCF2L-213ENST00000421756 SIL1Q9H173 461 aa16.39■□□□□ 0.21
MCF2L-213ENST00000421756 MYL6BP14649 208 aa16.39■□□□□ 0.21
MCF2L-213ENST00000421756 GBP4Q96PP9 640 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms