RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 RGPD5Q99666 1765 aa16.88■□□□□ 0.29
HNF4A-204ENST00000415691 BLMP54132 1417 aaPredicted RBP16.88■□□□□ 0.29
HNF4A-204ENST00000415691 ERBB3P21860 1342 aa16.88■□□□□ 0.29
HNF4A-204ENST00000415691 STRN4Q9NRL3 753 aa16.87■□□□□ 0.29
HNF4A-204ENST00000415691 RRP9O43818 475 aaKnown RBP16.87■□□□□ 0.29
HNF4A-204ENST00000415691 RRAGDQ9NQL2 400 aaPredicted RBP16.87■□□□□ 0.29
HNF4A-204ENST00000415691 SPATA31A6Q5VVP1 1343 aa16.87■□□□□ 0.29
HNF4A-204ENST00000415691 CSB-PGBD3P0DP91 1061 aa16.86■□□□□ 0.29
HNF4A-204ENST00000415691 EVA1CP58658 441 aa16.86■□□□□ 0.29
HNF4A-204ENST00000415691 PLEKHF1Q96S99 279 aa16.86■□□□□ 0.29
HNF4A-204ENST00000415691 IGSF1Q8N6C5 1336 aa16.85■□□□□ 0.29
HNF4A-204ENST00000415691 LRP6O75581 1613 aa16.85■□□□□ 0.29
HNF4A-204ENST00000415691 C8orf37Q96NL8 207 aa16.85■□□□□ 0.29
HNF4A-204ENST00000415691 NLRP2Q9NX02 1062 aa16.85■□□□□ 0.29
HNF4A-204ENST00000415691 FCHSD2O94868 740 aa16.85■□□□□ 0.29
HNF4A-204ENST00000415691 PRKAR2BP31323 418 aa16.85■□□□□ 0.29
HNF4A-204ENST00000415691 LARP1Q6PKG0 1096 aaKnown RBP16.85■□□□□ 0.29
HNF4A-204ENST00000415691 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
HNF4A-204ENST00000415691 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
HNF4A-204ENST00000415691 LMO7Q8WWI1 1683 aa16.83■□□□□ 0.29
HNF4A-204ENST00000415691 APAF1O14727 1248 aa16.83■□□□□ 0.28
HNF4A-204ENST00000415691 RUNDC1Q96C34 613 aa16.83■□□□□ 0.28
HNF4A-204ENST00000415691 COL5A2P05997 1499 aaPredicted RBP16.82■□□□□ 0.28
HNF4A-204ENST00000415691 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
HNF4A-204ENST00000415691 CLCN1P35523 988 aa16.81■□□□□ 0.28
HNF4A-204ENST00000415691 RRP7AQ9Y3A4 280 aaKnown RBP16.81■□□□□ 0.28
HNF4A-204ENST00000415691 RGPD1P0DJD0 1748 aa16.81■□□□□ 0.28
HNF4A-204ENST00000415691 WDR17Q8IZU2 1322 aa16.81■□□□□ 0.28
HNF4A-204ENST00000415691 RGPD2P0DJD1 1756 aa16.81■□□□□ 0.28
HNF4A-204ENST00000415691 MEX3CQ5U5Q3 659 aaKnown RBP16.81■□□□□ 0.28
HNF4A-204ENST00000415691 ZMYND15Q9H091 742 aa16.81■□□□□ 0.28
HNF4A-204ENST00000415691 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
HNF4A-204ENST00000415691 CDCA7LQ96GN5 454 aa16.8■□□□□ 0.28
HNF4A-204ENST00000415691 COL14A1Q05707 1796 aaKnown RBP16.8■□□□□ 0.28
HNF4A-204ENST00000415691 ABCC6O95255 1503 aa16.8■□□□□ 0.28
HNF4A-204ENST00000415691 PLIN1O60240 522 aa16.8■□□□□ 0.28
HNF4A-204ENST00000415691 NEUROD2Q15784 382 aa16.8■□□□□ 0.28
HNF4A-204ENST00000415691 SKAP1Q86WV1 359 aa16.79■□□□□ 0.28
HNF4A-204ENST00000415691 KDRP35968 1356 aa16.79■□□□□ 0.28
HNF4A-204ENST00000415691 VIRMAQ69YN4 1812 aaKnown RBP16.79■□□□□ 0.28
HNF4A-204ENST00000415691 PNNQ9H307 717 aaKnown RBP16.78■□□□□ 0.28
HNF4A-204ENST00000415691 HSP90AA2PQ14568 343 aaPredicted RBP16.78■□□□□ 0.28
HNF4A-204ENST00000415691 FNBP4Q8N3X1 1017 aaPredicted RBP16.78■□□□□ 0.28
HNF4A-204ENST00000415691 SLIT2O94813 1529 aa16.77■□□□□ 0.28
HNF4A-204ENST00000415691 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.28
HNF4A-204ENST00000415691 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
HNF4A-204ENST00000415691 CARD10Q9BWT7 1032 aa16.77■□□□□ 0.28
HNF4A-204ENST00000415691 HSP90AA1P07900 732 aaKnown RBP16.76■□□□□ 0.27
HNF4A-204ENST00000415691 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
HNF4A-204ENST00000415691 BECN1Q14457 450 aa16.76■□□□□ 0.27
HNF4A-204ENST00000415691 UNC5CLQ8IV45 518 aa16.76■□□□□ 0.27
HNF4A-204ENST00000415691 MTHFSDQ2M296 383 aaKnown RBP16.75■□□□□ 0.27
HNF4A-204ENST00000415691 USP21Q9UK80 565 aa16.75■□□□□ 0.27
HNF4A-204ENST00000415691 BCL9LQ86UU0 1499 aa16.75■□□□□ 0.27
HNF4A-204ENST00000415691 PLCH1Q4KWH8 1693 aa16.75■□□□□ 0.27
HNF4A-204ENST00000415691 NCAPD2Q15021 1401 aa16.75■□□□□ 0.27
HNF4A-204ENST00000415691 FSD2A1L4K1 749 aa16.74■□□□□ 0.27
HNF4A-204ENST00000415691 CRB1P82279 1406 aa16.74■□□□□ 0.27
HNF4A-204ENST00000415691 RIPK4P57078 832 aa16.74■□□□□ 0.27
HNF4A-204ENST00000415691 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
HNF4A-204ENST00000415691 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
HNF4A-204ENST00000415691 AFF2P51816 1311 aa16.73■□□□□ 0.27
HNF4A-204ENST00000415691 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
HNF4A-204ENST00000415691 NFE2L2Q16236 605 aa16.73■□□□□ 0.27
HNF4A-204ENST00000415691 C20orf194Q5TEA3 1177 aa16.73■□□□□ 0.27
HNF4A-204ENST00000415691 FAM208AQ9UK61 1670 aaKnown RBP16.72■□□□□ 0.27
HNF4A-204ENST00000415691 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.27
HNF4A-204ENST00000415691 NAP1L5Q96NT1 182 aaPredicted RBP16.71■□□□□ 0.27
HNF4A-204ENST00000415691 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
HNF4A-204ENST00000415691 SPATA31A1Q5TZJ5 1347 aa16.71■□□□□ 0.27
HNF4A-204ENST00000415691 MEGF6O75095 1541 aa16.71■□□□□ 0.27
HNF4A-204ENST00000415691 NRAPQ86VF7 1730 aa16.7■□□□□ 0.26
HNF4A-204ENST00000415691 SPATA31A5Q5VU36 1347 aa16.7■□□□□ 0.26
HNF4A-204ENST00000415691 SPATA31A7Q8IWB4 1347 aa16.7■□□□□ 0.26
HNF4A-204ENST00000415691 VPS72Q15906 364 aa16.7■□□□□ 0.26
HNF4A-204ENST00000415691 ANTXR1Q9H6X2 564 aa16.7■□□□□ 0.26
HNF4A-204ENST00000415691 GOLGA6L3A6NEY3 463 aa16.69■□□□□ 0.26
HNF4A-204ENST00000415691 IL2RBP14784 551 aa16.69■□□□□ 0.26
HNF4A-204ENST00000415691 DCTN1Q14203 1278 aa16.69■□□□□ 0.26
HNF4A-204ENST00000415691 PLEKHO1Q53GL0 409 aaPredicted RBP16.69■□□□□ 0.26
HNF4A-204ENST00000415691 WWC1Q8IX03 1113 aa16.69■□□□□ 0.26
HNF4A-204ENST00000415691 XRCC6P12956 609 aaKnown RBP eCLIP16.69■□□□□ 0.262e-10■■■■□ 23.7
HNF4A-204ENST00000415691 NWD2Q9ULI1 1742 aa16.68■□□□□ 0.26
HNF4A-204ENST00000415691 ILDR1Q86SU0 546 aaPredicted RBP16.68■□□□□ 0.26
HNF4A-204ENST00000415691 THUMPD2Q9BTF0 503 aaKnown RBP16.68■□□□□ 0.26
HNF4A-204ENST00000415691 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
HNF4A-204ENST00000415691 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
HNF4A-204ENST00000415691 PHF23Q9BUL5 403 aaPredicted RBP16.67■□□□□ 0.26
HNF4A-204ENST00000415691 ISY1Q9ULR0 285 aaKnown RBP16.67■□□□□ 0.26
HNF4A-204ENST00000415691 AMOTQ4VCS5 1084 aa16.67■□□□□ 0.26
HNF4A-204ENST00000415691 MCM10Q7L590 875 aa16.67■□□□□ 0.26
HNF4A-204ENST00000415691 QTRT2Q9H974 415 aaKnown RBP16.67■□□□□ 0.26
HNF4A-204ENST00000415691 ZNF521Q96K83 1311 aa16.66■□□□□ 0.26
HNF4A-204ENST00000415691 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
HNF4A-204ENST00000415691 FAM98CQ17RN3 349 aaKnown RBP16.65■□□□□ 0.26
HNF4A-204ENST00000415691 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
HNF4A-204ENST00000415691 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
HNF4A-204ENST00000415691 ZCRB1Q8TBF4 217 aaKnown RBP16.65■□□□□ 0.26
HNF4A-204ENST00000415691 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
HNF4A-204ENST00000415691 CYP27B1O15528 508 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms