RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 TRIM44Q96DX7 344 aaPredicted RBP17.19■□□□□ 0.34
COPS7B-210ENST00000413197 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
COPS7B-210ENST00000413197 A0A1W2PP64 1363 aa17.19■□□□□ 0.34
COPS7B-210ENST00000413197 K7ELQ4 463 aaPredicted RBP17.18■□□□□ 0.34
COPS7B-210ENST00000413197 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
COPS7B-210ENST00000413197 RIPK4P57078 832 aa17.17■□□□□ 0.34
COPS7B-210ENST00000413197 CABP1Q9NZU7 370 aa17.17■□□□□ 0.34
COPS7B-210ENST00000413197 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
COPS7B-210ENST00000413197 ZNF428Q96B54 188 aa17.17■□□□□ 0.34
COPS7B-210ENST00000413197 GCC1Q96CN9 775 aa17.17■□□□□ 0.34
COPS7B-210ENST00000413197 PPIP5K1Q6PFW1 1433 aa17.17■□□□□ 0.34
COPS7B-210ENST00000413197 NALCNQ8IZF0 1738 aa17.17■□□□□ 0.34
COPS7B-210ENST00000413197 PPP1R9BQ96SB3 815 aa17.16■□□□□ 0.34
COPS7B-210ENST00000413197 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
COPS7B-210ENST00000413197 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
COPS7B-210ENST00000413197 ZBTB7BO15156 539 aaPredicted RBP17.15■□□□□ 0.34
COPS7B-210ENST00000413197 CCDC173Q0VFZ6 552 aa17.15■□□□□ 0.34
COPS7B-210ENST00000413197 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
COPS7B-210ENST00000413197 NUDT16Q96DE0 195 aaKnown RBP17.15■□□□□ 0.34
COPS7B-210ENST00000413197 NWD1Q149M9 1564 aa17.14■□□□□ 0.34
COPS7B-210ENST00000413197 PROSER2Q86WR7 435 aaPredicted RBP17.14■□□□□ 0.33
COPS7B-210ENST00000413197 ATP7BP35670 1465 aa17.14■□□□□ 0.33
COPS7B-210ENST00000413197 CD163L1Q9NR16 1453 aa17.14■□□□□ 0.33
COPS7B-210ENST00000413197 GGNBP2Q9H3C7 697 aa17.13■□□□□ 0.33
COPS7B-210ENST00000413197 CDC42BPGQ6DT37 1551 aa17.13■□□□□ 0.33
COPS7B-210ENST00000413197 TPM2P07951 284 aa17.13■□□□□ 0.33
COPS7B-210ENST00000413197 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
COPS7B-210ENST00000413197 RGPD8O14715 1765 aaPredicted RBP17.13■□□□□ 0.33
COPS7B-210ENST00000413197 KLHL40Q2TBA0 621 aa17.12■□□□□ 0.33
COPS7B-210ENST00000413197 ANKRD45Q5TZF3 282 aa17.12■□□□□ 0.33
COPS7B-210ENST00000413197 ARHGAP45Q92619 1136 aa17.12■□□□□ 0.33
COPS7B-210ENST00000413197 FYB1O15117 783 aa17.12■□□□□ 0.33
COPS7B-210ENST00000413197 GAS2L2Q8NHY3 880 aa17.12■□□□□ 0.33
COPS7B-210ENST00000413197 TMEM94Q12767 1356 aa17.12■□□□□ 0.33
COPS7B-210ENST00000413197 SSFA2P28290 1259 aa17.11■□□□□ 0.33
COPS7B-210ENST00000413197 TICAM2Q86XR7 235 aa17.11■□□□□ 0.33
COPS7B-210ENST00000413197 DIAPH1O60610 1272 aaKnown RBP17.11■□□□□ 0.33
COPS7B-210ENST00000413197 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
COPS7B-210ENST00000413197 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
COPS7B-210ENST00000413197 GOLGA6L22H0YM25 854 aa17.1■□□□□ 0.33
COPS7B-210ENST00000413197 NASPP49321 788 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-210ENST00000413197 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
COPS7B-210ENST00000413197 FCHSD2O94868 740 aa17.09■□□□□ 0.33
COPS7B-210ENST00000413197 BAG4O95429 457 aaKnown RBP17.09■□□□□ 0.33
COPS7B-210ENST00000413197 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
COPS7B-210ENST00000413197 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.09■□□□□ 0.33
COPS7B-210ENST00000413197 LRRC7Q96NW7 1537 aa17.09■□□□□ 0.33
COPS7B-210ENST00000413197 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
COPS7B-210ENST00000413197 MRPL50Q8N5N7 158 aaKnown RBP17.09■□□□□ 0.33
COPS7B-210ENST00000413197 ZSCAN30Q86W11 494 aa17.08■□□□□ 0.33
COPS7B-210ENST00000413197 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.32
COPS7B-210ENST00000413197 VAMP4O75379 141 aa17.08■□□□□ 0.32
COPS7B-210ENST00000413197 CDC45O75419 566 aa17.08■□□□□ 0.32
COPS7B-210ENST00000413197 CCDC61Q9Y6R9 512 aa17.08■□□□□ 0.32
COPS7B-210ENST00000413197 ZNF445P59923 1031 aa17.07■□□□□ 0.32
COPS7B-210ENST00000413197 ABCC4O15439 1325 aa17.07■□□□□ 0.32
COPS7B-210ENST00000413197 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
COPS7B-210ENST00000413197 DDX49Q9Y6V7 483 aaKnown RBP17.07■□□□□ 0.32
COPS7B-210ENST00000413197 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
COPS7B-210ENST00000413197 C1orf115Q9H7X2 142 aa17.06■□□□□ 0.32
COPS7B-210ENST00000413197 CYP2E1P05181 493 aaPredicted RBP17.05■□□□□ 0.32
COPS7B-210ENST00000413197 RABEP1Q15276 862 aa17.05■□□□□ 0.32
COPS7B-210ENST00000413197 OFD1O75665 1012 aa17.05■□□□□ 0.32
COPS7B-210ENST00000413197 GSPT1P15170 499 aaKnown RBP17.05■□□□□ 0.32
COPS7B-210ENST00000413197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.05■□□□□ 0.32
COPS7B-210ENST00000413197 ORAI2Q96SN7 254 aa17.05■□□□□ 0.32
COPS7B-210ENST00000413197 KIAA1211Q6ZU35 1233 aa17.04■□□□□ 0.32
COPS7B-210ENST00000413197 ANP32BQ92688 251 aaKnown RBP17.04■□□□□ 0.32
COPS7B-210ENST00000413197 FMN2Q9NZ56 1722 aa17.04■□□□□ 0.32
COPS7B-210ENST00000413197 HS1BP3Q53T59 392 aa17.04■□□□□ 0.32
COPS7B-210ENST00000413197 ZRANB1Q9UGI0 708 aa17.04■□□□□ 0.32
COPS7B-210ENST00000413197 ACEP12821 1306 aa17.03■□□□□ 0.32
COPS7B-210ENST00000413197 TOPAZ1Q8N9V7 1692 aa17.03■□□□□ 0.32
COPS7B-210ENST00000413197 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
COPS7B-210ENST00000413197 TERF1P54274 439 aa17.03■□□□□ 0.32
COPS7B-210ENST00000413197 NUCB2P80303 420 aa17.03■□□□□ 0.32
COPS7B-210ENST00000413197 FBLN1P23142 703 aa17.02■□□□□ 0.32
COPS7B-210ENST00000413197 PLEKHM2Q8IWE5 1019 aa17.02■□□□□ 0.32
COPS7B-210ENST00000413197 TSPYL6Q8N831 410 aa17.02■□□□□ 0.32
COPS7B-210ENST00000413197 ZFP91Q96JP5 570 aaPredicted RBP17.02■□□□□ 0.32
COPS7B-210ENST00000413197 PDCL3Q9H2J4 239 aa17.02■□□□□ 0.32
COPS7B-210ENST00000413197 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.31
COPS7B-210ENST00000413197 ZNF853P0CG23 659 aa17.01■□□□□ 0.31
COPS7B-210ENST00000413197 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
COPS7B-210ENST00000413197 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
COPS7B-210ENST00000413197 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
COPS7B-210ENST00000413197 IFT57Q9NWB7 429 aa17.01■□□□□ 0.31
COPS7B-210ENST00000413197 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
COPS7B-210ENST00000413197 DDX17Q92841 729 aaKnown RBP17.01■□□□□ 0.31
COPS7B-210ENST00000413197 C19orf44Q9H6X5 657 aa17.01■□□□□ 0.31
COPS7B-210ENST00000413197 XPCQ01831 940 aaPredicted RBP17■□□□□ 0.31
COPS7B-210ENST00000413197 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
COPS7B-210ENST00000413197 NCLP19338 710 aaKnown RBP17■□□□□ 0.31
COPS7B-210ENST00000413197 GNAI1P63096 354 aa17■□□□□ 0.31
COPS7B-210ENST00000413197 ZSCAN23Q3MJ62 389 aa17■□□□□ 0.31
COPS7B-210ENST00000413197 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
COPS7B-210ENST00000413197 PDZRN4Q6ZMN7 1036 aaPredicted RBP17■□□□□ 0.31
COPS7B-210ENST00000413197 ZNF592Q92610 1267 aa17■□□□□ 0.31
COPS7B-210ENST00000413197 PDLIM2Q96JY6 352 aa17■□□□□ 0.31
COPS7B-210ENST00000413197 USP26Q9BXU7 913 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms