RNA–Protein interactions for RNA: ENST00000409911.5

LRRTM4-205, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LRRTM4, Length 2,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-205ENST00000409911 SLC26A8Q96RN1 970 aa8.27□□□□□ -1.09
LRRTM4-205ENST00000409911 CABP2Q9NPB3 220 aa8.27□□□□□ -1.09
LRRTM4-205ENST00000409911 ALKQ9UM73 1620 aa8.27□□□□□ -1.09
LRRTM4-205ENST00000409911 SMG6Q86US8 1419 aaKnown RBP8.27□□□□□ -1.09
LRRTM4-205ENST00000409911 DHX16O60231 1041 aaKnown RBP8.27□□□□□ -1.09
LRRTM4-205ENST00000409911 KDM4AO75164 1064 aa8.27□□□□□ -1.09
LRRTM4-205ENST00000409911 PPP1R9BQ96SB3 815 aa8.27□□□□□ -1.09
LRRTM4-205ENST00000409911 GUCY2CP25092 1073 aa8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 ZNF710Q8N1W2 664 aa8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 MNS1Q8NEH6 495 aa8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 TNNT1P13805 278 aa8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 CALRP27797 417 aaKnown RBP8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 DNAJC21Q5F1R6 531 aaKnown RBP8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 EXOC6Q8TAG9 804 aa8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 UPF2Q9HAU5 1272 aaKnown RBP8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 ADAMTS8Q9UP79 889 aa8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 SETD1AO15047 1707 aaKnown RBP8.26□□□□□ -1.09
LRRTM4-205ENST00000409911 MTA1Q13330 715 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 STAG3Q9UJ98 1225 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 NRXN3Q9Y4C0 1643 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 IPO8O15397 1037 aaKnown RBP8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 CT47B1P0C2W7 299 aaPredicted RBP8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 XPCQ01831 940 aaPredicted RBP8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 DNAJC14Q6Y2X3 702 aaPredicted RBP8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 MYRIPQ8NFW9 859 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 CDCA7LQ96GN5 454 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 YTHDC2Q9H6S0 1430 aaKnown RBP8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 PLEKHH1Q9ULM0 1364 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 SLFN14P0C7P3 912 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 HS1BP3Q53T59 392 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 WAPLQ7Z5K2 1190 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 FAM177A1Q8N128 213 aaPredicted RBP8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 PRAM1Q96QH2 718 aa8.25□□□□□ -1.09
LRRTM4-205ENST00000409911 NSD3Q9BZ95 1437 aa8.24□□□□□ -1.09
LRRTM4-205ENST00000409911 RIMS2Q9UQ26 1411 aa8.24□□□□□ -1.09
LRRTM4-205ENST00000409911 LRCH2Q5VUJ6 765 aa8.24□□□□□ -1.09
LRRTM4-205ENST00000409911 ANKRD23Q86SG2 305 aa8.24□□□□□ -1.09
LRRTM4-205ENST00000409911 FEZ1Q99689 392 aa8.24□□□□□ -1.09
LRRTM4-205ENST00000409911 MED4Q9NPJ6 270 aa8.24□□□□□ -1.09
LRRTM4-205ENST00000409911 BIRC2Q13490 618 aa8.24□□□□□ -1.09
LRRTM4-205ENST00000409911 CCDC189A1A4V9 331 aa8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 TRAK2O60296 914 aa8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 FOXD4L6Q3SYB3 417 aaPredicted RBP8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 FOXD4L3Q6VB84 417 aaPredicted RBP8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 PDCL2Q8N4E4 241 aa8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 ZNF428Q96B54 188 aa8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 SUFUQ9UMX1 484 aa8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 BLMP54132 1417 aaPredicted RBP8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 POLD1P28340 1107 aa8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 SKAP1Q86WV1 359 aa8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 SPINK5Q9NQ38 1064 aaPredicted RBP8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 OGFRQ9NZT2 677 aa8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 METP08581 1390 aa8.23□□□□□ -1.09
LRRTM4-205ENST00000409911 PPP1R12AO14974 1030 aaPredicted RBP8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 MCM4P33991 863 aa8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 ZC3H12AQ5D1E8 599 aaKnown RBP8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 NECTIN2Q92692 538 aa8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 TRERF1Q96PN7 1200 aa8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 TMX1Q9H3N1 280 aa8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 NOL7Q9UMY1 257 aaKnown RBP8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 PIK3R5Q8WYR1 880 aa8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 PAIP2Q9BPZ3 127 aaKnown RBP8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 NOL10Q9BSC4 688 aaKnown RBP8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 RASSF4Q9H2L5 321 aa8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 FAM210AQ96ND0 272 aa8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 NBPF3Q9H094 633 aa8.22□□□□□ -1.09
LRRTM4-205ENST00000409911 CCDC146Q8IYE0 955 aa8.21□□□□□ -1.09
LRRTM4-205ENST00000409911 CXorf56Q9H5V9 222 aa8.21□□□□□ -1.09
LRRTM4-205ENST00000409911 TOMM22Q9NS69 142 aa8.21□□□□□ -1.09
LRRTM4-205ENST00000409911 EVC2Q86UK5 1308 aa8.21□□□□□ -1.1
LRRTM4-205ENST00000409911 UBR1Q8IWV7 1749 aa8.21□□□□□ -1.1
LRRTM4-205ENST00000409911 TNRQ92752 1358 aa8.21□□□□□ -1.1
LRRTM4-205ENST00000409911 CD163L1Q9NR16 1453 aa8.21□□□□□ -1.1
LRRTM4-205ENST00000409911 KLHL33A6NCF5 533 aa8.21□□□□□ -1.1
LRRTM4-205ENST00000409911 NRDCO43847 1150 aa8.21□□□□□ -1.1
LRRTM4-205ENST00000409911 LTKP29376 864 aa8.21□□□□□ -1.1
LRRTM4-205ENST00000409911 HDAC1Q13547 482 aaPredicted RBP8.21□□□□□ -1.1
LRRTM4-205ENST00000409911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.21□□□□□ -1.12e-7■■■■□ 25.5
LRRTM4-205ENST00000409911 ESF1Q9H501 851 aaKnown RBP8.21□□□□□ -1.1
LRRTM4-205ENST00000409911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.21□□□□□ -1.12e-6■■■■■ 96.1
LRRTM4-205ENST00000409911 GTF2F1P35269 517 aaKnown RBP eCLIP8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 RRP1P56182 461 aaKnown RBP8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 HMGN5P82970 282 aaKnown RBP8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 NCKAP5LQ9HCH0 1330 aa8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 KIF3CO14782 793 aa8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 MCM5P33992 734 aa8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 SRPK2P78362 688 aaKnown RBP8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 EXOC8Q8IYI6 725 aa8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 PRIMPOLQ96LW4 560 aa8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 SLKQ9H2G2 1235 aaPredicted RBP8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 A0A1W2PP64 1363 aa8.2□□□□□ -1.1
LRRTM4-205ENST00000409911 U2AF2P26368 475 aaKnown RBP eCLIP8.19□□□□□ -1.1
LRRTM4-205ENST00000409911 TERF2Q15554 542 aa8.19□□□□□ -1.1
LRRTM4-205ENST00000409911 JMYQ8N9B5 988 aa8.19□□□□□ -1.1
LRRTM4-205ENST00000409911 TNPO1Q92973 898 aaKnown RBP8.19□□□□□ -1.1
LRRTM4-205ENST00000409911 TSPAN18Q96SJ8 248 aa8.19□□□□□ -1.1
LRRTM4-205ENST00000409911 C3P01024 1663 aa8.19□□□□□ -1.1
LRRTM4-205ENST00000409911 TXNDC2Q86VQ3 553 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms