RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 BCL11BQ9C0K0 894 aaPredicted RBP4.28□□□□□ -1.72
RGPD3-202ENST00000409886 DCHS1Q96JQ0 3298 aa4.28□□□□□ -1.72
RGPD3-202ENST00000409886 L3MBTL2Q969R5 705 aa4.28□□□□□ -1.72
RGPD3-202ENST00000409886 SLIT3O75094 1523 aa4.27□□□□□ -1.73
RGPD3-202ENST00000409886 CSMD1Q96PZ7 3565 aa4.27□□□□□ -1.73
RGPD3-202ENST00000409886 PRDM4Q9UKN5 801 aa4.27□□□□□ -1.73
RGPD3-202ENST00000409886 ZC3H4Q9UPT8 1303 aaKnown RBP4.27□□□□□ -1.73
RGPD3-202ENST00000409886 DAPK1P53355 1430 aa4.27□□□□□ -1.73
RGPD3-202ENST00000409886 NFKBIBQ15653 356 aa4.27□□□□□ -1.73
RGPD3-202ENST00000409886 CPDO75976 1380 aa4.27□□□□□ -1.73
RGPD3-202ENST00000409886 SLC15A2Q16348 729 aa4.27□□□□□ -1.73
RGPD3-202ENST00000409886 HSPA1AP0DMV8 641 aaKnown RBP4.27□□□□□ -1.73
RGPD3-202ENST00000409886 HSPA1BP0DMV9 641 aaKnown RBP4.27□□□□□ -1.73
RGPD3-202ENST00000409886 IPO9Q96P70 1041 aaKnown RBP4.27□□□□□ -1.73
RGPD3-202ENST00000409886 BACH2Q9BYV9 841 aa4.27□□□□□ -1.73
RGPD3-202ENST00000409886 ANKRD30AQ9BXX3 1397 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 CD2APQ9Y5K6 639 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 ZNF644Q9H582 1327 aaPredicted RBP4.26□□□□□ -1.73
RGPD3-202ENST00000409886 C5P01031 1676 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 TRIM37O94972 964 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 POLD1P28340 1107 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 CDCA7Q9BWT1 371 aaPredicted RBP4.26□□□□□ -1.73
RGPD3-202ENST00000409886 ROBO2Q9HCK4 1378 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 GAS2L3Q86XJ1 694 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 PNISRQ8TF01 805 aaKnown RBP4.26□□□□□ -1.73
RGPD3-202ENST00000409886 CHIC2Q9UKJ5 165 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 KIF7Q2M1P5 1343 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 TIAM2Q8IVF5 1701 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 RBBP6Q7Z6E9 1792 aaKnown RBP4.26□□□□□ -1.73
RGPD3-202ENST00000409886 DTNBO60941 627 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 NEFMP07197 916 aa4.26□□□□□ -1.73
RGPD3-202ENST00000409886 TCHHQ07283 1943 aa4.25□□□□□ -1.73
RGPD3-202ENST00000409886 KIAA0232Q92628 1395 aa4.25□□□□□ -1.73
RGPD3-202ENST00000409886 RPGRIP1LQ68CZ1 1315 aa4.25□□□□□ -1.73
RGPD3-202ENST00000409886 FAM98CQ17RN3 349 aaKnown RBP4.25□□□□□ -1.73
RGPD3-202ENST00000409886 CTCFP49711 727 aaPredicted RBP4.25□□□□□ -1.73
RGPD3-202ENST00000409886 ZNF831Q5JPB2 1677 aa4.25□□□□□ -1.73
RGPD3-202ENST00000409886 FAM161AQ3B820 660 aa4.25□□□□□ -1.73
RGPD3-202ENST00000409886 PRPF38BQ5VTL8 546 aaKnown RBP4.25□□□□□ -1.73
RGPD3-202ENST00000409886 DLEC1Q9Y238 1755 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 PDE4AP27815 886 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 DDX17Q92841 729 aaKnown RBP4.24□□□□□ -1.73
RGPD3-202ENST00000409886 NBEAQ8NFP9 2946 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 C8orf34Q49A92 452 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 SMC1BQ8NDV3 1235 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 TSC1Q92574 1164 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 ORAI2Q96SN7 254 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 RRP7BPQ9NSQ0 103 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 PPP4R2Q9NY27 417 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 LTBP1Q14766 1721 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 TAF1LQ8IZX4 1826 aa4.24□□□□□ -1.73
RGPD3-202ENST00000409886 YTHDC2Q9H6S0 1430 aaKnown RBP4.23□□□□□ -1.73
RGPD3-202ENST00000409886 FAM50AQ14320 339 aaKnown RBP4.23□□□□□ -1.73
RGPD3-202ENST00000409886 AKAP9Q99996 3911 aa4.23□□□□□ -1.73
RGPD3-202ENST00000409886 NSD3Q9BZ95 1437 aa4.23□□□□□ -1.73
RGPD3-202ENST00000409886 MRS2Q9HD23 443 aa4.23□□□□□ -1.73
RGPD3-202ENST00000409886 CRB1P82279 1406 aa4.23□□□□□ -1.73
RGPD3-202ENST00000409886 ABHD8Q96I13 439 aa4.23□□□□□ -1.73
RGPD3-202ENST00000409886 ABCC11Q96J66 1382 aa4.23□□□□□ -1.73
RGPD3-202ENST00000409886 LAMA5O15230 3695 aa4.23□□□□□ -1.73
RGPD3-202ENST00000409886 N4BP2Q86UW6 1770 aaPredicted RBP4.23□□□□□ -1.73
RGPD3-202ENST00000409886 CCER2I3L3R5 266 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 YBX3P16989 372 aaKnown RBP eCLIP4.22□□□□□ -1.73
RGPD3-202ENST00000409886 KRT28Q7Z3Y7 464 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 CCDC9Q9Y3X0 531 aaKnown RBP4.22□□□□□ -1.73
RGPD3-202ENST00000409886 PKNOX2Q96KN3 472 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 CLSPNQ9HAW4 1339 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 ITGB4P16144 1822 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 NBPF19A0A087WUL8 3843 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 PDE3BQ13370 1112 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 DICER1Q9UPY3 1922 aaKnown RBP4.22□□□□□ -1.73
RGPD3-202ENST00000409886 ZBTB22O15209 634 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 ANTXR1Q9H6X2 564 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 COL5A2P05997 1499 aaPredicted RBP4.22□□□□□ -1.73
RGPD3-202ENST00000409886 ATMQ13315 3056 aa4.22□□□□□ -1.73
RGPD3-202ENST00000409886 SLC27A3Q5K4L6 730 aa4.21□□□□□ -1.73
RGPD3-202ENST00000409886 VSIG10Q8N0Z9 540 aa4.21□□□□□ -1.73
RGPD3-202ENST00000409886 ADAMTSL1Q8N6G6 1762 aa4.21□□□□□ -1.73
RGPD3-202ENST00000409886 KDM6AO15550 1401 aaPredicted RBP4.21□□□□□ -1.73
RGPD3-202ENST00000409886 SBF1O95248 1867 aa4.21□□□□□ -1.74
RGPD3-202ENST00000409886 TCP11L2Q8N4U5 519 aa4.21□□□□□ -1.74
RGPD3-202ENST00000409886 CD2BP2O95400 341 aaKnown RBP4.21□□□□□ -1.74
RGPD3-202ENST00000409886 XRCC6P12956 609 aaKnown RBP eCLIP4.21□□□□□ -1.74
RGPD3-202ENST00000409886 PER1O15534 1290 aaPredicted RBP4.21□□□□□ -1.74
RGPD3-202ENST00000409886 ZBTB7AO95365 584 aa4.21□□□□□ -1.74
RGPD3-202ENST00000409886 RGS3P49796 1198 aa4.21□□□□□ -1.74
RGPD3-202ENST00000409886 AKT1S1Q96B36 256 aa4.21□□□□□ -1.74
RGPD3-202ENST00000409886 BTG4Q9NY30 223 aa4.21□□□□□ -1.74
RGPD3-202ENST00000409886 ATP1B4Q9UN42 357 aaPredicted RBP4.21□□□□□ -1.74
RGPD3-202ENST00000409886 IGHDP01880 384 aa4.21□□□□□ -1.74
RGPD3-202ENST00000409886 PRRC2CQ9Y520 2896 aaKnown RBP4.21□□□□□ -1.74
RGPD3-202ENST00000409886 AIDAQ96BJ3 306 aa4.2□□□□□ -1.74
RGPD3-202ENST00000409886 TOGARAM1Q9Y4F4 1720 aa4.2□□□□□ -1.74
RGPD3-202ENST00000409886 MYH15Q9Y2K3 1946 aa4.2□□□□□ -1.74
RGPD3-202ENST00000409886 CNTNAP1P78357 1384 aa4.2□□□□□ -1.74
RGPD3-202ENST00000409886 ROCK1Q13464 1354 aa4.2□□□□□ -1.74
RGPD3-202ENST00000409886 A0A0U1RQG5 324 aaPredicted RBP4.2□□□□□ -1.74
RGPD3-202ENST00000409886 ANP32CO43423 234 aa4.2□□□□□ -1.74
RGPD3-202ENST00000409886 ESCO1Q5FWF5 840 aa4.2□□□□□ -1.74
RGPD3-202ENST00000409886 ZBED9Q6R2W3 1325 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms