RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 PHRF1Q9P1Y6 1649 aaKnown RBP24.61■■□□□ 1.53
LIMS2-204ENST00000409286 SLIT3O75094 1523 aa24.61■■□□□ 1.53
LIMS2-204ENST00000409286 ZBTB40Q9NUA8 1239 aa24.61■■□□□ 1.53
LIMS2-204ENST00000409286 LTN1O94822 1766 aa24.6■■□□□ 1.53
LIMS2-204ENST00000409286 GCP02774 474 aa24.6■■□□□ 1.53
LIMS2-204ENST00000409286 HDAC1Q13547 482 aaPredicted RBP24.6■■□□□ 1.53
LIMS2-204ENST00000409286 API5Q9BZZ5 524 aaKnown RBP24.6■■□□□ 1.53
LIMS2-204ENST00000409286 USP19O94966 1318 aa24.6■■□□□ 1.53
LIMS2-204ENST00000409286 MSH5O43196 834 aa24.59■■□□□ 1.53
LIMS2-204ENST00000409286 RGS3P49796 1198 aa24.59■■□□□ 1.53
LIMS2-204ENST00000409286 FAM161AQ3B820 660 aa24.59■■□□□ 1.53
LIMS2-204ENST00000409286 GNAT3A8MTJ3 354 aa24.59■■□□□ 1.53
LIMS2-204ENST00000409286 ARHGEF25Q86VW2 580 aa24.59■■□□□ 1.53
LIMS2-204ENST00000409286 TRPM3Q9HCF6 1732 aaPredicted RBP24.58■■□□□ 1.52
LIMS2-204ENST00000409286 ABCC4O15439 1325 aa24.57■■□□□ 1.52
LIMS2-204ENST00000409286 XPCQ01831 940 aaPredicted RBP24.57■■□□□ 1.52
LIMS2-204ENST00000409286 LMTK3Q96Q04 1460 aa24.57■■□□□ 1.52
LIMS2-204ENST00000409286 STRCP1A6NGW2 1772 aa24.57■■□□□ 1.52
LIMS2-204ENST00000409286 KDM4FA0A1W2PPD8 638 aa24.56■■□□□ 1.52
LIMS2-204ENST00000409286 BABAM1Q9NWV8 329 aa24.56■■□□□ 1.52
LIMS2-204ENST00000409286 MAP3K5Q99683 1374 aa24.55■■□□□ 1.52
LIMS2-204ENST00000409286 TSPYL4Q9UJ04 414 aa24.55■■□□□ 1.52
LIMS2-204ENST00000409286 NBPF6Q5VWK0 638 aa24.54■■□□□ 1.52
LIMS2-204ENST00000409286 CADPS2Q86UW7 1296 aa24.54■■□□□ 1.52
LIMS2-204ENST00000409286 NBPF4Q96M43 638 aa24.54■■□□□ 1.52
LIMS2-204ENST00000409286 ZBTB7BO15156 539 aaPredicted RBP24.53■■□□□ 1.52
LIMS2-204ENST00000409286 HSPA2P54652 639 aa24.53■■□□□ 1.52
LIMS2-204ENST00000409286 PDZRN3Q9UPQ7 1066 aa24.53■■□□□ 1.52
LIMS2-204ENST00000409286 LMOD2Q6P5Q4 547 aa24.53■■□□□ 1.52
LIMS2-204ENST00000409286 MSH6P52701 1360 aa24.52■■□□□ 1.52
LIMS2-204ENST00000409286 C8orf34Q49A92 452 aa24.52■■□□□ 1.52
LIMS2-204ENST00000409286 IPO9Q96P70 1041 aaKnown RBP24.52■■□□□ 1.52
LIMS2-204ENST00000409286 LRRC37A3O60309 1634 aa24.51■■□□□ 1.51
LIMS2-204ENST00000409286 KRT24Q2M2I5 525 aa24.51■■□□□ 1.51
LIMS2-204ENST00000409286 USHBP1Q8N6Y0 703 aa24.51■■□□□ 1.51
LIMS2-204ENST00000409286 ZBTB7CA1YPR0 619 aa24.5■■□□□ 1.51
LIMS2-204ENST00000409286 IL17REQ8NFR9 667 aa24.5■■□□□ 1.51
LIMS2-204ENST00000409286 MIS18AQ9NYP9 233 aa24.5■■□□□ 1.51
LIMS2-204ENST00000409286 PTPRCP08575 1304 aa24.49■■□□□ 1.51
LIMS2-204ENST00000409286 SOS1Q07889 1333 aaPredicted RBP24.49■■□□□ 1.51
LIMS2-204ENST00000409286 STRCQ7RTU9 1775 aa24.49■■□□□ 1.51
LIMS2-204ENST00000409286 TAF7Q15545 349 aaPredicted RBP24.48■■□□□ 1.51
LIMS2-204ENST00000409286 SMC5Q8IY18 1101 aa24.48■■□□□ 1.51
LIMS2-204ENST00000409286 NCAPD2Q15021 1401 aa24.48■■□□□ 1.51
LIMS2-204ENST00000409286 ALS2Q96Q42 1657 aa24.47■■□□□ 1.51
LIMS2-204ENST00000409286 INTS3Q68E01 1043 aaKnown RBP24.46■■□□□ 1.51
LIMS2-204ENST00000409286 NPHP3Q7Z494 1330 aa24.46■■□□□ 1.51
LIMS2-204ENST00000409286 AMOTQ4VCS5 1084 aa24.46■■□□□ 1.51
LIMS2-204ENST00000409286 PLEKHO1Q53GL0 409 aaPredicted RBP24.46■■□□□ 1.51
LIMS2-204ENST00000409286 ANKRD24Q8TF21 1146 aa24.46■■□□□ 1.51
LIMS2-204ENST00000409286 LRRC59Q96AG4 307 aaKnown RBP24.44■■□□□ 1.5
LIMS2-204ENST00000409286 CEMIPQ8WUJ3 1361 aa24.44■■□□□ 1.5
LIMS2-204ENST00000409286 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
LIMS2-204ENST00000409286 SLC4A2P04920 1241 aa24.43■■□□□ 1.5
LIMS2-204ENST00000409286 AKAP4Q5JQC9 854 aa24.42■■□□□ 1.5
LIMS2-204ENST00000409286 ERICH6Q7L0X2 663 aa24.42■■□□□ 1.5
LIMS2-204ENST00000409286 RGS12O14924 1447 aa24.42■■□□□ 1.5
LIMS2-204ENST00000409286 ANP32EQ9BTT0 268 aa24.41■■□□□ 1.5
LIMS2-204ENST00000409286 MED1Q15648 1581 aaPredicted RBP24.41■■□□□ 1.5
LIMS2-204ENST00000409286 AXIN2Q9Y2T1 843 aa24.4■■□□□ 1.5
LIMS2-204ENST00000409286 NOP58Q9Y2X3 529 aaKnown RBP24.4■■□□□ 1.5
LIMS2-204ENST00000409286 XIRP1Q702N8 1843 aaKnown RBP24.39■■□□□ 1.5
LIMS2-204ENST00000409286 CCDC30Q5VVM6 783 aa24.39■■□□□ 1.49
LIMS2-204ENST00000409286 GCC1Q96CN9 775 aa24.39■■□□□ 1.49
LIMS2-204ENST00000409286 CAMTA1Q9Y6Y1 1673 aa24.39■■□□□ 1.49
LIMS2-204ENST00000409286 TNS3Q68CZ2 1445 aa24.38■■□□□ 1.49
LIMS2-204ENST00000409286 PLEKHG5O94827 1062 aa24.38■■□□□ 1.49
LIMS2-204ENST00000409286 NUCB1Q02818 461 aa24.38■■□□□ 1.49
LIMS2-204ENST00000409286 ZNF530Q6P9A1 599 aaPredicted RBP24.38■■□□□ 1.49
LIMS2-204ENST00000409286 STK31Q9BXU1 1019 aa24.38■■□□□ 1.49
LIMS2-204ENST00000409286 ZBTB47Q9UFB7 747 aaPredicted RBP24.38■■□□□ 1.49
LIMS2-204ENST00000409286 RGPD2P0DJD1 1756 aa24.38■■□□□ 1.49
LIMS2-204ENST00000409286 ZC3H6P61129 1189 aaKnown RBP24.37■■□□□ 1.49
LIMS2-204ENST00000409286 DDX17Q92841 729 aaKnown RBP24.37■■□□□ 1.49
LIMS2-204ENST00000409286 PXDNQ92626 1479 aa24.36■■□□□ 1.49
LIMS2-204ENST00000409286 DDRGK1Q96HY6 314 aa24.36■■□□□ 1.49
LIMS2-204ENST00000409286 ERBB3P21860 1342 aa24.35■■□□□ 1.49
LIMS2-204ENST00000409286 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
LIMS2-204ENST00000409286 CHMP4AQ9BY43 222 aa24.35■■□□□ 1.49
LIMS2-204ENST00000409286 LGR6Q9HBX8 967 aa24.35■■□□□ 1.49
LIMS2-204ENST00000409286 LMO7Q8WWI1 1683 aa24.35■■□□□ 1.49
LIMS2-204ENST00000409286 OVOS2A0A0G2JMS6 1433 aa24.34■■□□□ 1.49
LIMS2-204ENST00000409286 C1orf141Q5JVX7 400 aa24.34■■□□□ 1.49
LIMS2-204ENST00000409286 C1orf115Q9H7X2 142 aa24.34■■□□□ 1.49
LIMS2-204ENST00000409286 CCT4P50991 539 aaKnown RBP24.33■■□□□ 1.49
LIMS2-204ENST00000409286 G2E3Q7L622 706 aa24.33■■□□□ 1.49
LIMS2-204ENST00000409286 SIRT2Q8IXJ6 389 aa24.33■■□□□ 1.49
LIMS2-204ENST00000409286 ABCC6O95255 1503 aa24.32■■□□□ 1.48
LIMS2-204ENST00000409286 HOXB7P09629 217 aa24.32■■□□□ 1.48
LIMS2-204ENST00000409286 RNMTO43148 476 aaKnown RBP24.31■■□□□ 1.48
LIMS2-204ENST00000409286 TEFQ10587 303 aa24.31■■□□□ 1.48
LIMS2-204ENST00000409286 BRINP3Q76B58 766 aa24.31■■□□□ 1.48
LIMS2-204ENST00000409286 CHD1LQ86WJ1 897 aa24.31■■□□□ 1.48
LIMS2-204ENST00000409286 VIRMAQ69YN4 1812 aaKnown RBP24.31■■□□□ 1.48
LIMS2-204ENST00000409286 RPAP2Q8IXW5 612 aaPredicted RBP24.3■■□□□ 1.48
LIMS2-204ENST00000409286 EIF4A1P60842 406 aaKnown RBP24.3■■□□□ 1.48
LIMS2-204ENST00000409286 PLEKHG2Q9H7P9 1386 aa24.29■■□□□ 1.48
LIMS2-204ENST00000409286 FLIIQ13045 1269 aa24.29■■□□□ 1.48
LIMS2-204ENST00000409286 ANKRD44Q8N8A2 993 aa24.29■■□□□ 1.48
LIMS2-204ENST00000409286 CPDO75976 1380 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms