RNA–Protein interactions for RNA: ENST00000406397.1

VSNL1-203, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VSNL1, Length 2,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-203ENST00000406397 PIK3R4Q99570 1358 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 CAPN2P17655 700 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 CDK19Q9BWU1 502 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.79□□□□□ -1.32
VSNL1-203ENST00000406397 TRIM6-TRIM34B2RNG4 842 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.79□□□□□ -1.32
VSNL1-203ENST00000406397 WWC1Q8IX03 1113 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 TRIM34Q9BYJ4 488 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 KNDC1Q76NI1 1749 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 DLC1Q96QB1 1528 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 TULP4Q9NRJ4 1543 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 FAM135BQ49AJ0 1406 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 TMEM94Q12767 1356 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 EVC2Q86UK5 1308 aa6.79□□□□□ -1.32
VSNL1-203ENST00000406397 U2AF2P26368 475 aaKnown RBP eCLIP6.78□□□□□ -1.32
VSNL1-203ENST00000406397 NKX1-1Q15270 411 aaPredicted RBP6.78□□□□□ -1.32
VSNL1-203ENST00000406397 PTCH1Q13635 1447 aa6.78□□□□□ -1.32
VSNL1-203ENST00000406397 WASLO00401 505 aaPredicted RBP6.78□□□□□ -1.32
VSNL1-203ENST00000406397 TNPO1Q92973 898 aaKnown RBP6.78□□□□□ -1.32
VSNL1-203ENST00000406397 IGHDP01880 384 aa6.78□□□□□ -1.32
VSNL1-203ENST00000406397 PDLIM2Q96JY6 352 aa6.78□□□□□ -1.32
VSNL1-203ENST00000406397 SLC12A5Q9H2X9 1139 aa6.78□□□□□ -1.32
VSNL1-203ENST00000406397 UPF2Q9HAU5 1272 aaKnown RBP6.78□□□□□ -1.32
VSNL1-203ENST00000406397 APPP05067 770 aa6.77□□□□□ -1.33
VSNL1-203ENST00000406397 SIRT1Q96EB6 747 aa6.77□□□□□ -1.33
VSNL1-203ENST00000406397 NWD1Q149M9 1564 aa6.77□□□□□ -1.33
VSNL1-203ENST00000406397 PRR29P0C7W0 189 aa6.77□□□□□ -1.33
VSNL1-203ENST00000406397 SKOR2Q2VWA4 1001 aaPredicted RBP6.77□□□□□ -1.33
VSNL1-203ENST00000406397 NALCNQ8IZF0 1738 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 SBNO2Q9Y2G9 1366 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 PRR36Q9H6K5 1346 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 PDCL2Q8N4E4 241 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 TIGD1Q96MW7 591 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 CABP1Q9NZU7 370 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 TULP2O00295 520 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 CLGNO14967 610 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 MCM5P33992 734 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 GTF2F1P35269 517 aaKnown RBP eCLIP6.76□□□□□ -1.33
VSNL1-203ENST00000406397 PMFBP1Q8TBY8 1022 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 NUDT16Q96DE0 195 aaKnown RBP6.76□□□□□ -1.33
VSNL1-203ENST00000406397 BCL2L12Q9HB09 334 aa6.76□□□□□ -1.33
VSNL1-203ENST00000406397 BRD4O60885 1362 aaPredicted RBP6.76□□□□□ -1.33
VSNL1-203ENST00000406397 NKTRP30414 1462 aaKnown RBP6.75□□□□□ -1.33
VSNL1-203ENST00000406397 LRRC7Q96NW7 1537 aa6.75□□□□□ -1.33
VSNL1-203ENST00000406397 SLFN14P0C7P3 912 aa6.75□□□□□ -1.33
VSNL1-203ENST00000406397 DDIT3P35638 169 aa6.75□□□□□ -1.33
VSNL1-203ENST00000406397 CDCA8Q53HL2 280 aa6.75□□□□□ -1.33
VSNL1-203ENST00000406397 RBSNQ9H1K0 784 aa6.75□□□□□ -1.33
VSNL1-203ENST00000406397 ADGRL3Q9HAR2 1447 aa6.75□□□□□ -1.33
VSNL1-203ENST00000406397 GBP4Q96PP9 640 aa6.75□□□□□ -1.33
VSNL1-203ENST00000406397 C19orf44Q9H6X5 657 aa6.75□□□□□ -1.33
VSNL1-203ENST00000406397 LOC102724159A0A0B4J2E5 919 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 ATF3P18847 181 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 PWP2Q15269 919 aaKnown RBP6.74□□□□□ -1.33
VSNL1-203ENST00000406397 TRERF1Q96PN7 1200 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 KIF3AQ9Y496 699 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 RGPD8O14715 1765 aaPredicted RBP6.74□□□□□ -1.33
VSNL1-203ENST00000406397 MYBBP1AQ9BQG0 1328 aaKnown RBP6.74□□□□□ -1.33
VSNL1-203ENST00000406397 CCDC66A2RUB6 948 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 HMGN5P82970 282 aaKnown RBP6.74□□□□□ -1.33
VSNL1-203ENST00000406397 ESCO1Q5FWF5 840 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 EP400NLQ6ZTU2 488 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 PRIMPOLQ96LW4 560 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 ORAI2Q96SN7 254 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 GEMIN8Q9NWZ8 242 aaKnown RBP6.74□□□□□ -1.33
VSNL1-203ENST00000406397 XIRP1Q702N8 1843 aaKnown RBP6.74□□□□□ -1.33
VSNL1-203ENST00000406397 MAPK8IP3Q9UPT6 1336 aa6.74□□□□□ -1.33
VSNL1-203ENST00000406397 MSH6P52701 1360 aa6.73□□□□□ -1.33
VSNL1-203ENST00000406397 FAM193AP78312 1265 aa6.73□□□□□ -1.33
VSNL1-203ENST00000406397 DDX17Q92841 729 aaKnown RBP6.73□□□□□ -1.33
VSNL1-203ENST00000406397 CCDC61Q9Y6R9 512 aa6.73□□□□□ -1.33
VSNL1-203ENST00000406397 PPIP5K1Q6PFW1 1433 aa6.73□□□□□ -1.33
VSNL1-203ENST00000406397 ATP7BP35670 1465 aa6.73□□□□□ -1.33
VSNL1-203ENST00000406397 IBTKQ9P2D0 1353 aaPredicted RBP6.73□□□□□ -1.33
VSNL1-203ENST00000406397 RBM25P49756 843 aaKnown RBP6.73□□□□□ -1.33
VSNL1-203ENST00000406397 GABPB1Q06547 395 aaPredicted RBP6.73□□□□□ -1.33
VSNL1-203ENST00000406397 RAB3GAP1Q15042 981 aa6.73□□□□□ -1.33
VSNL1-203ENST00000406397 RBM42Q9BTD8 480 aaKnown RBP6.73□□□□□ -1.33
VSNL1-203ENST00000406397 YY1AP1Q9H869 796 aa6.73□□□□□ -1.33
VSNL1-203ENST00000406397 CCDC39Q9UFE4 941 aa6.73□□□□□ -1.33
VSNL1-203ENST00000406397 DDX49Q9Y6V7 483 aaKnown RBP6.73□□□□□ -1.33
VSNL1-203ENST00000406397 MYOM1P52179 1685 aa6.73□□□□□ -1.33
VSNL1-203ENST00000406397 ATAD2Q6PL18 1390 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 PATL2C9JE40 543 aaKnown RBP6.72□□□□□ -1.33
VSNL1-203ENST00000406397 HSP90AB1P08238 724 aaKnown RBP6.72□□□□□ -1.33
VSNL1-203ENST00000406397 KIAA2012Q0VF49 1180 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 ADGRB2O60241 1585 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 LTBP4Q8N2S1 1624 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 USP32Q8NFA0 1604 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 NCOA3Q9Y6Q9 1424 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 ERICH4A6NGS2 130 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 PRIM1P49642 420 aaKnown RBP6.72□□□□□ -1.33
VSNL1-203ENST00000406397 ZNF445P59923 1031 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 CC2D1BQ5T0F9 858 aaKnown RBP6.72□□□□□ -1.33
VSNL1-203ENST00000406397 HSCBQ8IWL3 235 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.72□□□□□ -1.331e-6■■□□□ 12.6
VSNL1-203ENST00000406397 NGDNQ8NEJ9 315 aaKnown RBP6.72□□□□□ -1.33
VSNL1-203ENST00000406397 CARD14Q9BXL6 1004 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 C22orf23Q9BZE7 217 aa6.72□□□□□ -1.33
VSNL1-203ENST00000406397 OGFRQ9NZT2 677 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms