RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CLEC17AQ6ZS10 378 aa13.3□□□□□ -0.28
CLIP4-204ENST00000404424 CEP85Q6P2H3 762 aa13.29□□□□□ -0.28
CLIP4-204ENST00000404424 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
CLIP4-204ENST00000404424 GRPEL1Q9HAV7 217 aa13.29□□□□□ -0.28
CLIP4-204ENST00000404424 TMEM2Q9UHN6 1383 aa13.28□□□□□ -0.28
CLIP4-204ENST00000404424 CASC1Q6TDU7 716 aa13.28□□□□□ -0.28
CLIP4-204ENST00000404424 RTL1A6NKG5 1358 aa13.28□□□□□ -0.28
CLIP4-204ENST00000404424 USP31Q70CQ4 1352 aa13.28□□□□□ -0.28
CLIP4-204ENST00000404424 ROBO2Q9HCK4 1378 aa13.28□□□□□ -0.28
CLIP4-204ENST00000404424 GOLGA6L22H0YM25 854 aa13.28□□□□□ -0.28
CLIP4-204ENST00000404424 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
CLIP4-204ENST00000404424 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
CLIP4-204ENST00000404424 ACEP12821 1306 aa13.28□□□□□ -0.28
CLIP4-204ENST00000404424 TNRQ92752 1358 aa13.27□□□□□ -0.28
CLIP4-204ENST00000404424 USP26Q9BXU7 913 aa13.27□□□□□ -0.29
CLIP4-204ENST00000404424 TOPAZ1Q8N9V7 1692 aa13.27□□□□□ -0.29
CLIP4-204ENST00000404424 RGPD1P0DJD0 1748 aa13.27□□□□□ -0.29
CLIP4-204ENST00000404424 NALCNQ8IZF0 1738 aa13.27□□□□□ -0.29
CLIP4-204ENST00000404424 USP6P35125 1406 aa13.27□□□□□ -0.29
CLIP4-204ENST00000404424 ARXQ96QS3 562 aa13.27□□□□□ -0.29
CLIP4-204ENST00000404424 PANK2Q9BZ23 570 aa13.27□□□□□ -0.29
CLIP4-204ENST00000404424 CRB1P82279 1406 aa13.26□□□□□ -0.29
CLIP4-204ENST00000404424 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
CLIP4-204ENST00000404424 HMMRO75330 724 aa13.26□□□□□ -0.29
CLIP4-204ENST00000404424 MCM10Q7L590 875 aa13.26□□□□□ -0.29
CLIP4-204ENST00000404424 GAS2L2Q8NHY3 880 aa13.26□□□□□ -0.29
CLIP4-204ENST00000404424 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.26□□□□□ -0.29
CLIP4-204ENST00000404424 ADAMTS13Q76LX8 1427 aa13.26□□□□□ -0.29
CLIP4-204ENST00000404424 MSH6P52701 1360 aa13.26□□□□□ -0.29
CLIP4-204ENST00000404424 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
CLIP4-204ENST00000404424 NUCB2P80303 420 aa13.24□□□□□ -0.29
CLIP4-204ENST00000404424 HSP90AB2PQ58FF8 381 aa13.24□□□□□ -0.29
CLIP4-204ENST00000404424 C16orf71Q8IYS4 520 aaPredicted RBP13.24□□□□□ -0.29
CLIP4-204ENST00000404424 UBR1Q8IWV7 1749 aa13.24□□□□□ -0.29
CLIP4-204ENST00000404424 TTC21AQ8NDW8 1320 aa13.24□□□□□ -0.29
CLIP4-204ENST00000404424 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
CLIP4-204ENST00000404424 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
CLIP4-204ENST00000404424 PLEKHG1Q9ULL1 1385 aa13.24□□□□□ -0.29
CLIP4-204ENST00000404424 REC8O95072 547 aa13.23□□□□□ -0.29
CLIP4-204ENST00000404424 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
CLIP4-204ENST00000404424 SDSP20132 328 aa13.23□□□□□ -0.29
CLIP4-204ENST00000404424 CLCN1P35523 988 aa13.23□□□□□ -0.29
CLIP4-204ENST00000404424 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
CLIP4-204ENST00000404424 MEIS3Q99687 375 aa13.23□□□□□ -0.29
CLIP4-204ENST00000404424 OSBPL3Q9H4L5 887 aa13.23□□□□□ -0.29
CLIP4-204ENST00000404424 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
CLIP4-204ENST00000404424 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
CLIP4-204ENST00000404424 PEAK1Q9H792 1746 aa13.23□□□□□ -0.29
CLIP4-204ENST00000404424 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
CLIP4-204ENST00000404424 IBTKQ9P2D0 1353 aaPredicted RBP13.23□□□□□ -0.29
CLIP4-204ENST00000404424 ST18O60284 1047 aa13.22□□□□□ -0.29
CLIP4-204ENST00000404424 SSFA2P28290 1259 aa13.22□□□□□ -0.29
CLIP4-204ENST00000404424 KLHL40Q2TBA0 621 aa13.22□□□□□ -0.29
CLIP4-204ENST00000404424 BAG4O95429 457 aaKnown RBP13.21□□□□□ -0.29
CLIP4-204ENST00000404424 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.29
CLIP4-204ENST00000404424 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.29
CLIP4-204ENST00000404424 FLT4P35916 1363 aa13.21□□□□□ -0.29
CLIP4-204ENST00000404424 KDRP35968 1356 aa13.21□□□□□ -0.29
CLIP4-204ENST00000404424 HTATSF1O43719 755 aaKnown RBP13.21□□□□□ -0.29
CLIP4-204ENST00000404424 SBNO1A3KN83 1393 aa13.21□□□□□ -0.3
CLIP4-204ENST00000404424 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.3
CLIP4-204ENST00000404424 ERC2O15083 957 aa13.2□□□□□ -0.3
CLIP4-204ENST00000404424 SMARCA5O60264 1052 aaPredicted RBP13.2□□□□□ -0.3
CLIP4-204ENST00000404424 CYP2E1P05181 493 aaPredicted RBP13.2□□□□□ -0.3
CLIP4-204ENST00000404424 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
CLIP4-204ENST00000404424 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
CLIP4-204ENST00000404424 GNAI2P04899 355 aa13.19□□□□□ -0.3
CLIP4-204ENST00000404424 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
CLIP4-204ENST00000404424 SOS1Q07889 1333 aaPredicted RBP13.19□□□□□ -0.3
CLIP4-204ENST00000404424 PDE1AP54750 535 aa13.18□□□□□ -0.3
CLIP4-204ENST00000404424 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
CLIP4-204ENST00000404424 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
CLIP4-204ENST00000404424 FMN2Q9NZ56 1722 aa13.18□□□□□ -0.3
CLIP4-204ENST00000404424 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
CLIP4-204ENST00000404424 PTPRUQ92729 1446 aa13.17□□□□□ -0.3
CLIP4-204ENST00000404424 APBB1O00213 710 aa13.17□□□□□ -0.3
CLIP4-204ENST00000404424 GNAI3P08754 354 aa13.17□□□□□ -0.3
CLIP4-204ENST00000404424 LTKP29376 864 aa13.17□□□□□ -0.3
CLIP4-204ENST00000404424 SLC4A10Q6U841 1118 aa13.17□□□□□ -0.3
CLIP4-204ENST00000404424 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
CLIP4-204ENST00000404424 G2E3Q7L622 706 aa13.17□□□□□ -0.3
CLIP4-204ENST00000404424 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
CLIP4-204ENST00000404424 ESPNB1AK53 854 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 FOXO3O43524 673 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 F6X3S4 739 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 AMPHP49418 695 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 MCM2P49736 904 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 CCDC173Q0VFZ6 552 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 EYA1Q99502 592 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 BABAM1Q9NWV8 329 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
CLIP4-204ENST00000404424 ZNF445P59923 1031 aa13.15□□□□□ -0.3
CLIP4-204ENST00000404424 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.3
CLIP4-204ENST00000404424 SALL3Q9BXA9 1300 aa13.15□□□□□ -0.3
CLIP4-204ENST00000404424 SOX12O15370 315 aa13.15□□□□□ -0.3
CLIP4-204ENST00000404424 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
CLIP4-204ENST00000404424 ANP32BQ92688 251 aaKnown RBP13.15□□□□□ -0.3
CLIP4-204ENST00000404424 LMBRD1Q9NUN5 540 aa13.15□□□□□ -0.3
CLIP4-204ENST00000404424 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms