RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 GDPD2Q9HCC8 539 aa22.1■■□□□ 1.13
KDM1A-202ENST00000400181 ZNF853P0CG23 659 aa22.1■■□□□ 1.13
KDM1A-202ENST00000400181 STAG3Q9UJ98 1225 aa22.1■■□□□ 1.13
KDM1A-202ENST00000400181 ZKSCAN5Q9Y2L8 839 aa22.1■■□□□ 1.13
KDM1A-202ENST00000400181 LMTK2Q8IWU2 1503 aa22.1■■□□□ 1.13
KDM1A-202ENST00000400181 CEP85Q6P2H3 762 aa22.1■■□□□ 1.13
KDM1A-202ENST00000400181 ANKRD44Q8N8A2 993 aa22.1■■□□□ 1.13
KDM1A-202ENST00000400181 REC8O95072 547 aa22.09■■□□□ 1.13
KDM1A-202ENST00000400181 LRSAM1Q6UWE0 723 aa22.09■■□□□ 1.13
KDM1A-202ENST00000400181 PDLIM2Q96JY6 352 aa22.09■■□□□ 1.13
KDM1A-202ENST00000400181 ASXL2Q76L83 1435 aa22.08■■□□□ 1.13
KDM1A-202ENST00000400181 IL13P35225 146 aa22.08■■□□□ 1.12
KDM1A-202ENST00000400181 ERC2O15083 957 aa22.07■■□□□ 1.12
KDM1A-202ENST00000400181 TMX3Q96JJ7 454 aa22.07■■□□□ 1.12
KDM1A-202ENST00000400181 YTHDC2Q9H6S0 1430 aaKnown RBP22.07■■□□□ 1.12
KDM1A-202ENST00000400181 DNTTIP2Q5QJE6 756 aaKnown RBP22.07■■□□□ 1.12
KDM1A-202ENST00000400181 ZNF500O60304 480 aaPredicted RBP22.06■■□□□ 1.12
KDM1A-202ENST00000400181 MCM10Q7L590 875 aa22.06■■□□□ 1.12
KDM1A-202ENST00000400181 MIS18AQ9NYP9 233 aa22.06■■□□□ 1.12
KDM1A-202ENST00000400181 AEBP1Q8IUX7 1158 aa22.05■■□□□ 1.12
KDM1A-202ENST00000400181 NCKAP5LQ9HCH0 1330 aa22.05■■□□□ 1.12
KDM1A-202ENST00000400181 HS1BP3Q53T59 392 aa22.05■■□□□ 1.12
KDM1A-202ENST00000400181 EXOC6BQ9Y2D4 811 aa22.05■■□□□ 1.12
KDM1A-202ENST00000400181 MSH6P52701 1360 aa22.05■■□□□ 1.12
KDM1A-202ENST00000400181 NEXMIFQ5QGS0 1516 aa22.04■■□□□ 1.12
KDM1A-202ENST00000400181 F6X3S4 739 aa22.04■■□□□ 1.12
KDM1A-202ENST00000400181 JARID2Q92833 1246 aaPredicted RBP22.04■■□□□ 1.12
KDM1A-202ENST00000400181 SOX12O15370 315 aa22.04■■□□□ 1.12
KDM1A-202ENST00000400181 LMOD3Q0VAK6 560 aa22.04■■□□□ 1.12
KDM1A-202ENST00000400181 RPAP2Q8IXW5 612 aaPredicted RBP22.04■■□□□ 1.12
KDM1A-202ENST00000400181 ZNF830Q96NB3 372 aaPredicted RBP22.04■■□□□ 1.12
KDM1A-202ENST00000400181 UPF3BQ9BZI7 483 aaKnown RBP22.03■■□□□ 1.12
KDM1A-202ENST00000400181 ZFYVE9O95405 1425 aa22.03■■□□□ 1.12
KDM1A-202ENST00000400181 FBXO31Q5XUX0 539 aaPredicted RBP22.03■■□□□ 1.12
KDM1A-202ENST00000400181 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.03■■□□□ 1.12
KDM1A-202ENST00000400181 RILPL2Q969X0 211 aa22.03■■□□□ 1.12
KDM1A-202ENST00000400181 CCDC39Q9UFE4 941 aa22.03■■□□□ 1.12
KDM1A-202ENST00000400181 ABCC3O15438 1527 aa22.02■■□□□ 1.12
KDM1A-202ENST00000400181 NPM1P06748 294 aaKnown RBP eCLIP22.02■■□□□ 1.12
KDM1A-202ENST00000400181 ANO2Q9NQ90 1003 aa22.02■■□□□ 1.12
KDM1A-202ENST00000400181 PALD1Q9ULE6 856 aa22.02■■□□□ 1.12
KDM1A-202ENST00000400181 RIMS2Q9UQ26 1411 aa22.01■■□□□ 1.11
KDM1A-202ENST00000400181 PTPRMP28827 1452 aa22.01■■□□□ 1.11
KDM1A-202ENST00000400181 TRIM6-TRIM34B2RNG4 842 aa22.01■■□□□ 1.11
KDM1A-202ENST00000400181 TSC1Q92574 1164 aa22.01■■□□□ 1.11
KDM1A-202ENST00000400181 KNDC1Q76NI1 1749 aa22.01■■□□□ 1.11
KDM1A-202ENST00000400181 SLC4A2P04920 1241 aa22.01■■□□□ 1.11
KDM1A-202ENST00000400181 PRDM10Q9NQV6 1147 aa22■■□□□ 1.11
KDM1A-202ENST00000400181 SULT6B1Q6IMI4 303 aa22■■□□□ 1.11
KDM1A-202ENST00000400181 ATP10DQ9P241 1426 aa22■■□□□ 1.11
KDM1A-202ENST00000400181 GADD45BO75293 160 aaPredicted RBP22■■□□□ 1.11
KDM1A-202ENST00000400181 TSPY26PQ9H489 355 aa22■■□□□ 1.11
KDM1A-202ENST00000400181 RTL1A6NKG5 1358 aa21.99■■□□□ 1.11
KDM1A-202ENST00000400181 PDE1AP54750 535 aa21.99■■□□□ 1.11
KDM1A-202ENST00000400181 PLCB2Q00722 1185 aa21.99■■□□□ 1.11
KDM1A-202ENST00000400181 POGZQ7Z3K3 1410 aa21.99■■□□□ 1.11
KDM1A-202ENST00000400181 CSPP1Q1MSJ5 1256 aa21.99■■□□□ 1.11
KDM1A-202ENST00000400181 FRMPD1Q5SYB0 1578 aa21.99■■□□□ 1.11
KDM1A-202ENST00000400181 DTNBO60941 627 aa21.98■■□□□ 1.11
KDM1A-202ENST00000400181 MBD3O95983 291 aa21.98■■□□□ 1.11
KDM1A-202ENST00000400181 TERF1P54274 439 aa21.98■■□□□ 1.11
KDM1A-202ENST00000400181 COG3Q96JB2 828 aa21.98■■□□□ 1.11
KDM1A-202ENST00000400181 SIGLEC1Q9BZZ2 1709 aa21.98■■□□□ 1.11
KDM1A-202ENST00000400181 C17orf53Q8N3J3 647 aaPredicted RBP21.98■■□□□ 1.11
KDM1A-202ENST00000400181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.98■■□□□ 1.11
KDM1A-202ENST00000400181 SLC52A1Q9NWF4 448 aa21.97■■□□□ 1.11
KDM1A-202ENST00000400181 G2E3Q7L622 706 aa21.97■■□□□ 1.11
KDM1A-202ENST00000400181 LARP6Q9BRS8 491 aaKnown RBP21.97■■□□□ 1.11
KDM1A-202ENST00000400181 FAM177BA6PVY3 158 aa21.96■■□□□ 1.11
KDM1A-202ENST00000400181 NECTIN2Q92692 538 aa21.96■■□□□ 1.11
KDM1A-202ENST00000400181 MAP2P11137 1827 aaKnown RBP21.95■■□□□ 1.1
KDM1A-202ENST00000400181 HMMRO75330 724 aa21.95■■□□□ 1.1
KDM1A-202ENST00000400181 BRD1O95696 1058 aa21.95■■□□□ 1.1
KDM1A-202ENST00000400181 SASS6Q6UVJ0 657 aa21.95■■□□□ 1.1
KDM1A-202ENST00000400181 USP25Q9UHP3 1055 aa21.95■■□□□ 1.1
KDM1A-202ENST00000400181 ARHGAP31Q2M1Z3 1444 aa21.94■■□□□ 1.1
KDM1A-202ENST00000400181 KIAA2012Q0VF49 1180 aa21.94■■□□□ 1.1
KDM1A-202ENST00000400181 HECW2Q9P2P5 1572 aa21.94■■□□□ 1.1
KDM1A-202ENST00000400181 NUTM2FA1L443 756 aa21.93■■□□□ 1.1
KDM1A-202ENST00000400181 MAP7D2Q96T17 732 aa21.93■■□□□ 1.1
KDM1A-202ENST00000400181 ESYT1Q9BSJ8 1104 aa21.93■■□□□ 1.1
KDM1A-202ENST00000400181 MCCP23508 829 aa21.93■■□□□ 1.1
KDM1A-202ENST00000400181 TTC12Q9H892 705 aaPredicted RBP21.93■■□□□ 1.1
KDM1A-202ENST00000400181 DYNC1I1O14576 645 aa21.92■■□□□ 1.1
KDM1A-202ENST00000400181 USP48Q86UV5 1035 aa21.92■■□□□ 1.1
KDM1A-202ENST00000400181 MAP4K4O95819 1239 aaPredicted RBP21.92■■□□□ 1.1
KDM1A-202ENST00000400181 MCM5P33992 734 aa21.91■■□□□ 1.1
KDM1A-202ENST00000400181 SYAP1Q96A49 352 aaPredicted RBP21.91■■□□□ 1.1
KDM1A-202ENST00000400181 ANKRD26Q9UPS8 1709 aa21.91■■□□□ 1.1
KDM1A-202ENST00000400181 RGS12O14924 1447 aa21.9■■□□□ 1.1
KDM1A-202ENST00000400181 ARHGEF40Q8TER5 1519 aa21.9■■□□□ 1.1
KDM1A-202ENST00000400181 PIK3C2BO00750 1634 aa21.9■■□□□ 1.1
KDM1A-202ENST00000400181 TXNDC2Q86VQ3 553 aa21.89■■□□□ 1.1
KDM1A-202ENST00000400181 UNC5CLQ8IV45 518 aa21.89■■□□□ 1.1
KDM1A-202ENST00000400181 FOXO3O43524 673 aa21.89■■□□□ 1.09
KDM1A-202ENST00000400181 REREQ9P2R6 1566 aa21.88■■□□□ 1.09
KDM1A-202ENST00000400181 KIF24Q5T7B8 1368 aa21.88■■□□□ 1.09
KDM1A-202ENST00000400181 CHL1O00533 1208 aa21.88■■□□□ 1.09
KDM1A-202ENST00000400181 HCLS1P14317 486 aaPredicted RBP21.88■■□□□ 1.09
KDM1A-202ENST00000400181 MX1P20591 662 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms