RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 NWD1Q149M9 1564 aa12.66□□□□□ -0.38
PFDN6-205ENST00000395134 CD46P15529 392 aa12.66□□□□□ -0.38
PFDN6-205ENST00000395134 UCN2Q96RP3 112 aa12.66□□□□□ -0.38
PFDN6-205ENST00000395134 PCDHB15Q9Y5E8 787 aa12.66□□□□□ -0.38
PFDN6-205ENST00000395134 TMEM94Q12767 1356 aa12.66□□□□□ -0.38
PFDN6-205ENST00000395134 NUTM2BA6NNL0 878 aaPredicted RBP12.65□□□□□ -0.38
PFDN6-205ENST00000395134 NUTM2EB1AL46 878 aaPredicted RBP12.65□□□□□ -0.38
PFDN6-205ENST00000395134 NUTM2DQ5VT03 806 aaPredicted RBP12.65□□□□□ -0.38
PFDN6-205ENST00000395134 NUTM2AQ8IVF1 878 aaPredicted RBP12.65□□□□□ -0.38
PFDN6-205ENST00000395134 TTC13Q8NBP0 860 aa12.65□□□□□ -0.38
PFDN6-205ENST00000395134 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
PFDN6-205ENST00000395134 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.38
PFDN6-205ENST00000395134 SPHKAPQ2M3C7 1700 aa12.64□□□□□ -0.39
PFDN6-205ENST00000395134 RIMS2Q9UQ26 1411 aa12.63□□□□□ -0.39
PFDN6-205ENST00000395134 GPR37L1O60883 481 aa12.63□□□□□ -0.39
PFDN6-205ENST00000395134 NDUFV2P19404 249 aa12.63□□□□□ -0.39
PFDN6-205ENST00000395134 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
PFDN6-205ENST00000395134 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
PFDN6-205ENST00000395134 NKTRP30414 1462 aaKnown RBP12.62□□□□□ -0.39
PFDN6-205ENST00000395134 PRPF38BQ5VTL8 546 aaKnown RBP12.62□□□□□ -0.39
PFDN6-205ENST00000395134 DNAJC14Q6Y2X3 702 aaPredicted RBP12.62□□□□□ -0.39
PFDN6-205ENST00000395134 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
PFDN6-205ENST00000395134 OCEL1Q9H607 264 aa12.62□□□□□ -0.39
PFDN6-205ENST00000395134 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
PFDN6-205ENST00000395134 MAFBQ9Y5Q3 323 aaPredicted RBP12.62□□□□□ -0.39
PFDN6-205ENST00000395134 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
PFDN6-205ENST00000395134 SOX11P35716 441 aa12.61□□□□□ -0.39
PFDN6-205ENST00000395134 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
PFDN6-205ENST00000395134 SLC52A1Q9NWF4 448 aa12.61□□□□□ -0.39
PFDN6-205ENST00000395134 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.6□□□□□ -0.39
PFDN6-205ENST00000395134 KCNA6P17658 529 aa12.6□□□□□ -0.39
PFDN6-205ENST00000395134 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
PFDN6-205ENST00000395134 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
PFDN6-205ENST00000395134 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
PFDN6-205ENST00000395134 PRR7Q8TB68 274 aa12.59□□□□□ -0.39
PFDN6-205ENST00000395134 NUP155O75694 1391 aa12.58□□□□□ -0.4
PFDN6-205ENST00000395134 ROCK1Q13464 1354 aa12.58□□□□□ -0.4
PFDN6-205ENST00000395134 PLEKHG1Q9ULL1 1385 aa12.58□□□□□ -0.4
PFDN6-205ENST00000395134 ZNF16P17020 682 aaPredicted RBP12.58□□□□□ -0.4
PFDN6-205ENST00000395134 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
PFDN6-205ENST00000395134 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
PFDN6-205ENST00000395134 EIF5BO60841 1220 aaKnown RBP12.57□□□□□ -0.4
PFDN6-205ENST00000395134 ELOAQ14241 798 aaKnown RBP12.57□□□□□ -0.4
PFDN6-205ENST00000395134 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
PFDN6-205ENST00000395134 HMX1Q9NP08 348 aaPredicted RBP12.57□□□□□ -0.4
PFDN6-205ENST00000395134 MSH6P52701 1360 aa12.56□□□□□ -0.4
PFDN6-205ENST00000395134 KIF1BO60333 1816 aa12.56□□□□□ -0.4
PFDN6-205ENST00000395134 SLC34A2O95436 690 aa12.56□□□□□ -0.4
PFDN6-205ENST00000395134 NRXN3Q9Y4C0 1643 aa12.55□□□□□ -0.4
PFDN6-205ENST00000395134 FAM135BQ49AJ0 1406 aa12.55□□□□□ -0.4
PFDN6-205ENST00000395134 ZBTB3Q9H5J0 574 aa12.55□□□□□ -0.4
PFDN6-205ENST00000395134 DIP2AQ14689 1571 aa12.55□□□□□ -0.4
PFDN6-205ENST00000395134 CLTCL1P53675 1640 aa12.55□□□□□ -0.4
PFDN6-205ENST00000395134 ADAMTS13Q76LX8 1427 aa12.54□□□□□ -0.4
PFDN6-205ENST00000395134 TCF3P15923 654 aa12.54□□□□□ -0.4
PFDN6-205ENST00000395134 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
PFDN6-205ENST00000395134 TBC1D9Q6ZT07 1266 aa12.54□□□□□ -0.4
PFDN6-205ENST00000395134 TRPM2O94759 1503 aa12.53□□□□□ -0.4
PFDN6-205ENST00000395134 COL16A1Q07092 1604 aaPredicted RBP12.53□□□□□ -0.4
PFDN6-205ENST00000395134 RCCD1A6NED2 376 aa12.53□□□□□ -0.4
PFDN6-205ENST00000395134 CANXP27824 592 aaKnown RBP12.53□□□□□ -0.4
PFDN6-205ENST00000395134 ARID4AP29374 1257 aaPredicted RBP12.53□□□□□ -0.4
PFDN6-205ENST00000395134 CTDSPL2Q05D32 466 aa12.53□□□□□ -0.4
PFDN6-205ENST00000395134 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
PFDN6-205ENST00000395134 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
PFDN6-205ENST00000395134 DRC1Q96MC2 740 aa12.53□□□□□ -0.4
PFDN6-205ENST00000395134 BCL2L13Q9BXK5 485 aa12.53□□□□□ -0.4
PFDN6-205ENST00000395134 XRN1Q8IZH2 1706 aaKnown RBP12.52□□□□□ -0.41
PFDN6-205ENST00000395134 PHLDB3Q6NSJ2 640 aa12.52□□□□□ -0.41
PFDN6-205ENST00000395134 RGS17Q9UGC6 210 aaPredicted RBP12.52□□□□□ -0.41
PFDN6-205ENST00000395134 ATP9BO43861 1147 aa12.51□□□□□ -0.41
PFDN6-205ENST00000395134 NOM1Q5C9Z4 860 aaKnown RBP12.51□□□□□ -0.41
PFDN6-205ENST00000395134 TMEM164Q5U3C3 297 aa12.51□□□□□ -0.41
PFDN6-205ENST00000395134 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
PFDN6-205ENST00000395134 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
PFDN6-205ENST00000395134 HDGFP51858 240 aaKnown RBP12.5□□□□□ -0.41
PFDN6-205ENST00000395134 PRSS12P56730 875 aa12.5□□□□□ -0.41
PFDN6-205ENST00000395134 ZNF326Q5BKZ1 582 aaKnown RBP12.5□□□□□ -0.41
PFDN6-205ENST00000395134 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.5□□□□□ -0.41
PFDN6-205ENST00000395134 SLAIN2Q9P270 581 aa12.5□□□□□ -0.41
PFDN6-205ENST00000395134 PTPRUQ92729 1446 aa12.5□□□□□ -0.41
PFDN6-205ENST00000395134 NALCNQ8IZF0 1738 aa12.49□□□□□ -0.41
PFDN6-205ENST00000395134 ZMIZ1Q9ULJ6 1067 aa12.49□□□□□ -0.41
PFDN6-205ENST00000395134 SETBP1Q9Y6X0 1596 aa12.48□□□□□ -0.41
PFDN6-205ENST00000395134 CHMP4AQ9BY43 222 aa12.48□□□□□ -0.41
PFDN6-205ENST00000395134 TBX22Q9Y458 520 aa12.48□□□□□ -0.41
PFDN6-205ENST00000395134 NEXMIFQ5QGS0 1516 aa12.47□□□□□ -0.41
PFDN6-205ENST00000395134 IER5LQ5T953 404 aa12.47□□□□□ -0.41
PFDN6-205ENST00000395134 POTEAQ6S8J7 498 aa12.47□□□□□ -0.41
PFDN6-205ENST00000395134 GIPC2Q8TF65 315 aa12.47□□□□□ -0.41
PFDN6-205ENST00000395134 STK32AQ8WU08 396 aa12.47□□□□□ -0.41
PFDN6-205ENST00000395134 SREK1Q8WXA9 508 aaKnown RBP12.47□□□□□ -0.41
PFDN6-205ENST00000395134 SHPRHQ149N8 1683 aa12.47□□□□□ -0.41
PFDN6-205ENST00000395134 RRBP1Q9P2E9 1410 aaKnown RBP12.46□□□□□ -0.41
PFDN6-205ENST00000395134 SOWAHDA6NJG2 315 aa12.46□□□□□ -0.41
PFDN6-205ENST00000395134 SSFA2P28290 1259 aa12.46□□□□□ -0.41
PFDN6-205ENST00000395134 CDCA7LQ96GN5 454 aa12.46□□□□□ -0.41
PFDN6-205ENST00000395134 EYA1Q99502 592 aa12.46□□□□□ -0.41
PFDN6-205ENST00000395134 LRP6O75581 1613 aa12.46□□□□□ -0.41
PFDN6-205ENST00000395134 NAIPQ13075 1403 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms