RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.91■□□□□ 0.78
SCN3B-202ENST00000392770 PES1O00541 588 aaKnown RBP19.9■□□□□ 0.78
SCN3B-202ENST00000392770 ATP10AO60312 1499 aa19.9■□□□□ 0.78
SCN3B-202ENST00000392770 KDM4AO75164 1064 aa19.9■□□□□ 0.78
SCN3B-202ENST00000392770 SAFBQ15424 915 aaKnown RBP eCLIP19.9■□□□□ 0.78
SCN3B-202ENST00000392770 MYD88Q99836 296 aa19.9■□□□□ 0.78
SCN3B-202ENST00000392770 STARD3NLO95772 234 aa19.9■□□□□ 0.78
SCN3B-202ENST00000392770 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.78
SCN3B-202ENST00000392770 PTPRCP08575 1304 aa19.89■□□□□ 0.78
SCN3B-202ENST00000392770 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.77
SCN3B-202ENST00000392770 ANKRD24Q8TF21 1146 aa19.89■□□□□ 0.77
SCN3B-202ENST00000392770 GNL3LQ9NVN8 582 aaKnown RBP19.89■□□□□ 0.77
SCN3B-202ENST00000392770 ZRANB1Q9UGI0 708 aa19.88■□□□□ 0.77
SCN3B-202ENST00000392770 CFAP74Q9C0B2 1584 aa19.88■□□□□ 0.77
SCN3B-202ENST00000392770 K7ELQ4 463 aaPredicted RBP19.88■□□□□ 0.77
SCN3B-202ENST00000392770 CYP46A1Q9Y6A2 500 aa19.88■□□□□ 0.77
SCN3B-202ENST00000392770 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
SCN3B-202ENST00000392770 HSP90AB2PQ58FF8 381 aa19.88■□□□□ 0.77
SCN3B-202ENST00000392770 LARP1Q6PKG0 1096 aaKnown RBP19.88■□□□□ 0.77
SCN3B-202ENST00000392770 CWC27Q6UX04 472 aaKnown RBP19.88■□□□□ 0.77
SCN3B-202ENST00000392770 KLHL34Q8N239 644 aa19.87■□□□□ 0.77
SCN3B-202ENST00000392770 MPHOSPH8Q99549 860 aa19.87■□□□□ 0.77
SCN3B-202ENST00000392770 CARD14Q9BXL6 1004 aa19.87■□□□□ 0.77
SCN3B-202ENST00000392770 A0A1W2PP64 1363 aa19.87■□□□□ 0.77
SCN3B-202ENST00000392770 PUS7Q96PZ0 661 aaKnown RBP19.87■□□□□ 0.77
SCN3B-202ENST00000392770 RAB11FIP3O75154 756 aa19.86■□□□□ 0.77
SCN3B-202ENST00000392770 SART3Q15020 963 aaKnown RBP19.86■□□□□ 0.77
SCN3B-202ENST00000392770 FKBP4Q02790 459 aaKnown RBP eCLIP19.86■□□□□ 0.77
SCN3B-202ENST00000392770 CTDP1Q9Y5B0 961 aaPredicted RBP19.86■□□□□ 0.77
SCN3B-202ENST00000392770 CHD1O14646 1710 aa19.86■□□□□ 0.77
SCN3B-202ENST00000392770 CCDC73Q6ZRK6 1079 aa19.86■□□□□ 0.77
SCN3B-202ENST00000392770 CCDC85AQ96PX6 553 aaPredicted RBP19.86■□□□□ 0.77
SCN3B-202ENST00000392770 HOOK1Q9UJC3 728 aaKnown RBP19.86■□□□□ 0.77
SCN3B-202ENST00000392770 MX1P20591 662 aa19.86■□□□□ 0.77
SCN3B-202ENST00000392770 SASS6Q6UVJ0 657 aa19.86■□□□□ 0.77
SCN3B-202ENST00000392770 DNAAF4Q8WXU2 420 aa19.86■□□□□ 0.77
SCN3B-202ENST00000392770 KIF1BPQ96EK5 621 aa19.85■□□□□ 0.77
SCN3B-202ENST00000392770 RRP12Q5JTH9 1297 aaKnown RBP19.85■□□□□ 0.77
SCN3B-202ENST00000392770 FLIIQ13045 1269 aa19.85■□□□□ 0.77
SCN3B-202ENST00000392770 SAMD9LQ8IVG5 1584 aa19.85■□□□□ 0.77
SCN3B-202ENST00000392770 LRRFIP2Q9Y608 721 aaKnown RBP19.85■□□□□ 0.77
SCN3B-202ENST00000392770 MTMR7Q9Y216 660 aa19.84■□□□□ 0.77
SCN3B-202ENST00000392770 HYPKQ9NX55 129 aa19.84■□□□□ 0.77
SCN3B-202ENST00000392770 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
SCN3B-202ENST00000392770 NPATQ14207 1427 aa19.84■□□□□ 0.77
SCN3B-202ENST00000392770 CEP126Q9P2H0 1117 aa19.84■□□□□ 0.77
SCN3B-202ENST00000392770 TRAK2O60296 914 aa19.84■□□□□ 0.77
SCN3B-202ENST00000392770 ADAMTS2O95450 1211 aa19.84■□□□□ 0.77
SCN3B-202ENST00000392770 DBF4Q9UBU7 674 aaPredicted RBP19.83■□□□□ 0.77
SCN3B-202ENST00000392770 TPM2P07951 284 aa19.83■□□□□ 0.77
SCN3B-202ENST00000392770 STK3Q13188 491 aa19.83■□□□□ 0.77
SCN3B-202ENST00000392770 POLKQ9UBT6 870 aa19.83■□□□□ 0.77
SCN3B-202ENST00000392770 BICDL1Q6ZP65 573 aa19.83■□□□□ 0.76
SCN3B-202ENST00000392770 BRMS1Q9HCU9 246 aa19.83■□□□□ 0.76
SCN3B-202ENST00000392770 MSH6P52701 1360 aa19.83■□□□□ 0.76
SCN3B-202ENST00000392770 CADPS2Q86UW7 1296 aa19.82■□□□□ 0.76
SCN3B-202ENST00000392770 EIF4A2Q14240 407 aaKnown RBP19.82■□□□□ 0.76
SCN3B-202ENST00000392770 CWC22Q9HCG8 908 aaKnown RBP19.82■□□□□ 0.76
SCN3B-202ENST00000392770 ZSCAN25Q6NSZ9 544 aa19.82■□□□□ 0.76
SCN3B-202ENST00000392770 FMNL2Q96PY5 1086 aa19.82■□□□□ 0.76
SCN3B-202ENST00000392770 SPINK5Q9NQ38 1064 aaPredicted RBP19.82■□□□□ 0.76
SCN3B-202ENST00000392770 KDM6BO15054 1643 aa19.82■□□□□ 0.76
SCN3B-202ENST00000392770 XBP1P17861 261 aa19.81■□□□□ 0.76
SCN3B-202ENST00000392770 ARID3AQ99856 593 aa19.81■□□□□ 0.76
SCN3B-202ENST00000392770 SLC3A2P08195 630 aaKnown RBP19.81■□□□□ 0.76
SCN3B-202ENST00000392770 ANKRD1Q15327 319 aa19.81■□□□□ 0.76
SCN3B-202ENST00000392770 CHRNA2Q15822 529 aa19.81■□□□□ 0.76
SCN3B-202ENST00000392770 IFNL2Q8IZJ0 200 aa19.81■□□□□ 0.76
SCN3B-202ENST00000392770 PRPF40AO75400 957 aaKnown RBP19.81■□□□□ 0.76
SCN3B-202ENST00000392770 ZFYVE9O95405 1425 aa19.81■□□□□ 0.76
SCN3B-202ENST00000392770 AEBP1Q8IUX7 1158 aa19.81■□□□□ 0.76
SCN3B-202ENST00000392770 MAP3K2Q9Y2U5 619 aa19.8■□□□□ 0.76
SCN3B-202ENST00000392770 STK11IPQ8N1F8 1099 aa19.8■□□□□ 0.76
SCN3B-202ENST00000392770 CCDC47Q96A33 483 aaKnown RBP19.8■□□□□ 0.76
SCN3B-202ENST00000392770 TTC37Q6PGP7 1564 aa19.8■□□□□ 0.76
SCN3B-202ENST00000392770 TPM3P06753 285 aa19.8■□□□□ 0.76
SCN3B-202ENST00000392770 NEO1Q92859 1461 aa19.8■□□□□ 0.76
SCN3B-202ENST00000392770 PDRG1Q9NUG6 133 aa19.8■□□□□ 0.76
SCN3B-202ENST00000392770 TCEAL9Q9UHQ7 104 aa19.8■□□□□ 0.76
SCN3B-202ENST00000392770 ZFYVE16Q7Z3T8 1539 aa19.79■□□□□ 0.76
SCN3B-202ENST00000392770 IGHDP01880 384 aa19.79■□□□□ 0.76
SCN3B-202ENST00000392770 PDCP20941 246 aa19.79■□□□□ 0.76
SCN3B-202ENST00000392770 CAVIN1Q6NZI2 390 aaKnown RBP19.79■□□□□ 0.76
SCN3B-202ENST00000392770 JAKMIP1Q96N16 626 aaKnown RBP19.79■□□□□ 0.76
SCN3B-202ENST00000392770 PIK3R4Q99570 1358 aa19.79■□□□□ 0.76
SCN3B-202ENST00000392770 TSR1Q2NL82 804 aaKnown RBP19.79■□□□□ 0.76
SCN3B-202ENST00000392770 TRPM2O94759 1503 aa19.78■□□□□ 0.76
SCN3B-202ENST00000392770 NCKAP5LQ9HCH0 1330 aa19.78■□□□□ 0.76
SCN3B-202ENST00000392770 TPM1P09493 284 aa19.78■□□□□ 0.76
SCN3B-202ENST00000392770 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
SCN3B-202ENST00000392770 NACAP1Q9BZK3 213 aa19.78■□□□□ 0.76
SCN3B-202ENST00000392770 ZCCHC11Q5TAX3 1644 aaKnown RBP19.78■□□□□ 0.76
SCN3B-202ENST00000392770 IGHMBP2P38935 993 aaKnown RBP19.78■□□□□ 0.76
SCN3B-202ENST00000392770 PER1O15534 1290 aaPredicted RBP19.77■□□□□ 0.76
SCN3B-202ENST00000392770 SAMD1Q6SPF0 538 aaPredicted RBP19.77■□□□□ 0.76
SCN3B-202ENST00000392770 MBD5Q9P267 1494 aa19.77■□□□□ 0.76
SCN3B-202ENST00000392770 GLRX3O76003 335 aaKnown RBP19.76■□□□□ 0.75
SCN3B-202ENST00000392770 METTL24Q5JXM2 366 aa19.76■□□□□ 0.75
SCN3B-202ENST00000392770 PREX2Q70Z35 1606 aa19.76■□□□□ 0.75
SCN3B-202ENST00000392770 BLOC1S2Q6QNY1 142 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms