RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 AXIN2Q9Y2T1 843 aa24.21■■□□□ 1.47
CCDC50-202ENST00000392456 SPATA31A3Q5VYP0 1347 aa24.21■■□□□ 1.47
CCDC50-202ENST00000392456 ARHGEF10O15013 1369 aa24.2■■□□□ 1.46
CCDC50-202ENST00000392456 DCTN1Q14203 1278 aa24.19■■□□□ 1.46
CCDC50-202ENST00000392456 RGS3P49796 1198 aa24.19■■□□□ 1.46
CCDC50-202ENST00000392456 RTL1A6NKG5 1358 aa24.18■■□□□ 1.46
CCDC50-202ENST00000392456 KDRP35968 1356 aa24.18■■□□□ 1.46
CCDC50-202ENST00000392456 TNS3Q68CZ2 1445 aa24.18■■□□□ 1.46
CCDC50-202ENST00000392456 NBPF6Q5VWK0 638 aa24.17■■□□□ 1.46
CCDC50-202ENST00000392456 LRRC59Q96AG4 307 aaKnown RBP24.17■■□□□ 1.46
CCDC50-202ENST00000392456 NBPF4Q96M43 638 aa24.17■■□□□ 1.46
CCDC50-202ENST00000392456 BCAR3O75815 825 aa24.17■■□□□ 1.46
CCDC50-202ENST00000392456 SOS2Q07890 1332 aaPredicted RBP24.16■■□□□ 1.46
CCDC50-202ENST00000392456 MTHFSDQ2M296 383 aaKnown RBP24.15■■□□□ 1.46
CCDC50-202ENST00000392456 MYH16Q9H6N6 1097 aa24.14■■□□□ 1.45
CCDC50-202ENST00000392456 C20orf194Q5TEA3 1177 aa24.13■■□□□ 1.45
CCDC50-202ENST00000392456 DLG5Q8TDM6 1919 aa24.13■■□□□ 1.45
CCDC50-202ENST00000392456 CLCN1P35523 988 aa24.12■■□□□ 1.45
CCDC50-202ENST00000392456 LTBP4Q8N2S1 1624 aa24.12■■□□□ 1.45
CCDC50-202ENST00000392456 CHRNA2Q15822 529 aa24.11■■□□□ 1.45
CCDC50-202ENST00000392456 MCM10Q7L590 875 aa24.11■■□□□ 1.45
CCDC50-202ENST00000392456 PDCL3Q9H2J4 239 aa24.11■■□□□ 1.45
CCDC50-202ENST00000392456 IL16Q14005 1332 aa24.11■■□□□ 1.45
CCDC50-202ENST00000392456 EXOSC9Q06265 439 aaKnown RBP24.11■■□□□ 1.45
CCDC50-202ENST00000392456 KLHL34Q8N239 644 aa24.11■■□□□ 1.45
CCDC50-202ENST00000392456 ANKRD24Q8TF21 1146 aa24.1■■□□□ 1.45
CCDC50-202ENST00000392456 PHRF1Q9P1Y6 1649 aaKnown RBP24.09■■□□□ 1.45
CCDC50-202ENST00000392456 EXOC6Q8TAG9 804 aa24.08■■□□□ 1.45
CCDC50-202ENST00000392456 RGPD2P0DJD1 1756 aa24.08■■□□□ 1.45
CCDC50-202ENST00000392456 DDRGK1Q96HY6 314 aa24.08■■□□□ 1.45
CCDC50-202ENST00000392456 BCL2L13Q9BXK5 485 aa24.08■■□□□ 1.45
CCDC50-202ENST00000392456 NAP1L2Q9ULW6 460 aaPredicted RBP24.08■■□□□ 1.45
CCDC50-202ENST00000392456 RARSP54136 660 aaKnown RBP24.07■■□□□ 1.44
CCDC50-202ENST00000392456 KIAA0232Q92628 1395 aa24.06■■□□□ 1.44
CCDC50-202ENST00000392456 PDE4AP27815 886 aa24.06■■□□□ 1.44
CCDC50-202ENST00000392456 RGPD5Q99666 1765 aa24.05■■□□□ 1.44
CCDC50-202ENST00000392456 ZNF853P0CG23 659 aa24.05■■□□□ 1.44
CCDC50-202ENST00000392456 BBXQ8WY36 941 aaPredicted RBP24.05■■□□□ 1.44
CCDC50-202ENST00000392456 LMOD3Q0VAK6 560 aa24.04■■□□□ 1.44
CCDC50-202ENST00000392456 BACH2Q9BYV9 841 aa24.04■■□□□ 1.44
CCDC50-202ENST00000392456 MBIPQ9NS73 344 aa24.04■■□□□ 1.44
CCDC50-202ENST00000392456 ERBB3P21860 1342 aa24.04■■□□□ 1.44
CCDC50-202ENST00000392456 TCERG1O14776 1098 aaKnown RBP24.03■■□□□ 1.44
CCDC50-202ENST00000392456 GTF2E1P29083 439 aaPredicted RBP24.03■■□□□ 1.44
CCDC50-202ENST00000392456 CRYBG1Q9Y4K1 1723 aa24.03■■□□□ 1.44
CCDC50-202ENST00000392456 CRBNQ96SW2 442 aa24.02■■□□□ 1.44
CCDC50-202ENST00000392456 IFT57Q9NWB7 429 aa24.02■■□□□ 1.44
CCDC50-202ENST00000392456 CFAP44Q96MT7 982 aa24.01■■□□□ 1.43
CCDC50-202ENST00000392456 TSPYL6Q8N831 410 aa24.01■■□□□ 1.43
CCDC50-202ENST00000392456 GNAI1P63096 354 aa24■■□□□ 1.43
CCDC50-202ENST00000392456 GAS2L2Q8NHY3 880 aa24■■□□□ 1.43
CCDC50-202ENST00000392456 ELL2O00472 640 aaPredicted RBP24■■□□□ 1.43
CCDC50-202ENST00000392456 MIS18AQ9NYP9 233 aa24■■□□□ 1.43
CCDC50-202ENST00000392456 COL18A1P39060 1754 aa23.99■■□□□ 1.43
CCDC50-202ENST00000392456 NHSL1Q5SYE7 1610 aa23.99■■□□□ 1.43
CCDC50-202ENST00000392456 TNNQ9UQP3 1299 aa23.99■■□□□ 1.43
CCDC50-202ENST00000392456 NLRP2Q9NX02 1062 aa23.98■■□□□ 1.43
CCDC50-202ENST00000392456 ROBO1Q9Y6N7 1651 aa23.97■■□□□ 1.43
CCDC50-202ENST00000392456 CPDO75976 1380 aa23.97■■□□□ 1.43
CCDC50-202ENST00000392456 IL17REQ8NFR9 667 aa23.97■■□□□ 1.43
CCDC50-202ENST00000392456 SSH1Q8WYL5 1049 aa23.97■■□□□ 1.43
CCDC50-202ENST00000392456 RTF1Q92541 710 aaKnown RBP23.97■■□□□ 1.43
CCDC50-202ENST00000392456 KRT24Q2M2I5 525 aa23.96■■□□□ 1.43
CCDC50-202ENST00000392456 CRB1P82279 1406 aa23.96■■□□□ 1.43
CCDC50-202ENST00000392456 FRAT2O75474 233 aaPredicted RBP23.96■■□□□ 1.43
CCDC50-202ENST00000392456 HAP1P54257 671 aaPredicted RBP23.96■■□□□ 1.43
CCDC50-202ENST00000392456 C8orf58Q8NAV2 365 aa23.96■■□□□ 1.43
CCDC50-202ENST00000392456 PRDM11Q9NQV5 511 aa23.96■■□□□ 1.43
CCDC50-202ENST00000392456 GNAT3A8MTJ3 354 aa23.95■■□□□ 1.43
CCDC50-202ENST00000392456 NCAPD2Q15021 1401 aa23.95■■□□□ 1.43
CCDC50-202ENST00000392456 CHL1O00533 1208 aa23.95■■□□□ 1.42
CCDC50-202ENST00000392456 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.94■■□□□ 1.42
CCDC50-202ENST00000392456 CSB-PGBD3P0DP91 1061 aa23.94■■□□□ 1.42
CCDC50-202ENST00000392456 VAMP4O75379 141 aa23.93■■□□□ 1.42
CCDC50-202ENST00000392456 L1TD1Q5T7N2 865 aaKnown RBP23.93■■□□□ 1.42
CCDC50-202ENST00000392456 CHMP4BQ9H444 224 aaKnown RBP23.93■■□□□ 1.42
CCDC50-202ENST00000392456 MS4A1P11836 297 aa23.93■■□□□ 1.42
CCDC50-202ENST00000392456 CT47B1P0C2W7 299 aaPredicted RBP23.92■■□□□ 1.42
CCDC50-202ENST00000392456 PIP4K2BP78356 416 aa23.92■■□□□ 1.42
CCDC50-202ENST00000392456 PANK1Q8TE04 598 aa23.92■■□□□ 1.42
CCDC50-202ENST00000392456 SMC4Q9NTJ3 1288 aa23.92■■□□□ 1.42
CCDC50-202ENST00000392456 MAP3K5Q99683 1374 aa23.92■■□□□ 1.42
CCDC50-202ENST00000392456 TPM2P07951 284 aa23.91■■□□□ 1.42
CCDC50-202ENST00000392456 LGR6Q9HBX8 967 aa23.91■■□□□ 1.42
CCDC50-202ENST00000392456 CAMTA1Q9Y6Y1 1673 aa23.9■■□□□ 1.42
CCDC50-202ENST00000392456 RLBP1P12271 317 aa23.9■■□□□ 1.42
CCDC50-202ENST00000392456 PAXIP1Q6ZW49 1069 aaPredicted RBP23.9■■□□□ 1.42
CCDC50-202ENST00000392456 CANXP27824 592 aaKnown RBP23.9■■□□□ 1.42
CCDC50-202ENST00000392456 IPO4Q8TEX9 1081 aaKnown RBP23.9■■□□□ 1.42
CCDC50-202ENST00000392456 ZNF530Q6P9A1 599 aaPredicted RBP23.89■■□□□ 1.42
CCDC50-202ENST00000392456 CLUAP1Q96AJ1 413 aa23.89■■□□□ 1.42
CCDC50-202ENST00000392456 HTATSF1O43719 755 aaKnown RBP23.89■■□□□ 1.41
CCDC50-202ENST00000392456 TWISTNBQ3B726 338 aaPredicted RBP23.89■■□□□ 1.41
CCDC50-202ENST00000392456 PLEKHO1Q53GL0 409 aaPredicted RBP23.88■■□□□ 1.41
CCDC50-202ENST00000392456 LMO7Q8WWI1 1683 aa23.88■■□□□ 1.41
CCDC50-202ENST00000392456 MPRIPQ6WCQ1 1025 aa23.87■■□□□ 1.41
CCDC50-202ENST00000392456 ABCA3Q99758 1704 aa23.87■■□□□ 1.41
CCDC50-202ENST00000392456 COG6Q9Y2V7 657 aa23.87■■□□□ 1.41
CCDC50-202ENST00000392456 TSPYL4Q9UJ04 414 aa23.86■■□□□ 1.41
CCDC50-202ENST00000392456 NOB1Q9ULX3 412 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms