RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 NME9Q86XW9 330 aa14.4□□□□□ -0.1
CCDC57-205ENST00000392346 TNPO1Q92973 898 aaKnown RBP14.4□□□□□ -0.1
CCDC57-205ENST00000392346 RIMS2Q9UQ26 1411 aa14.4□□□□□ -0.1
CCDC57-205ENST00000392346 COL3A1P02461 1466 aaPredicted RBP14.4□□□□□ -0.1
CCDC57-205ENST00000392346 HSP90AA1P07900 732 aaKnown RBP14.4□□□□□ -0.1
CCDC57-205ENST00000392346 NUCB1Q02818 461 aa14.39□□□□□ -0.11
CCDC57-205ENST00000392346 KIF2CQ99661 725 aa14.39□□□□□ -0.11
CCDC57-205ENST00000392346 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
CCDC57-205ENST00000392346 LRRC7Q96NW7 1537 aa14.39□□□□□ -0.11
CCDC57-205ENST00000392346 ERBB4Q15303 1308 aa14.38□□□□□ -0.11
CCDC57-205ENST00000392346 PPIP5K1Q6PFW1 1433 aa14.38□□□□□ -0.11
CCDC57-205ENST00000392346 C8orf58Q8NAV2 365 aa14.38□□□□□ -0.11
CCDC57-205ENST00000392346 PSMD1Q99460 953 aa14.38□□□□□ -0.11
CCDC57-205ENST00000392346 POLKQ9UBT6 870 aa14.38□□□□□ -0.11
CCDC57-205ENST00000392346 CD163L1Q9NR16 1453 aa14.38□□□□□ -0.11
CCDC57-205ENST00000392346 NEXMIFQ5QGS0 1516 aa14.38□□□□□ -0.11
CCDC57-205ENST00000392346 TBC1D9Q6ZT07 1266 aa14.38□□□□□ -0.11
CCDC57-205ENST00000392346 HMGB1P09429 215 aaKnown RBP14.37□□□□□ -0.11
CCDC57-205ENST00000392346 SSFA2P28290 1259 aa14.37□□□□□ -0.11
CCDC57-205ENST00000392346 MBIPQ9NS73 344 aa14.37□□□□□ -0.11
CCDC57-205ENST00000392346 PLEKHG1Q9ULL1 1385 aa14.37□□□□□ -0.11
CCDC57-205ENST00000392346 SMARCA5O60264 1052 aaPredicted RBP14.37□□□□□ -0.11
CCDC57-205ENST00000392346 GAS2L2Q8NHY3 880 aa14.36□□□□□ -0.11
CCDC57-205ENST00000392346 TERF2IPQ9NYB0 399 aa14.36□□□□□ -0.11
CCDC57-205ENST00000392346 TMEM131LA2VDJ0 1609 aa14.36□□□□□ -0.11
CCDC57-205ENST00000392346 PKP1Q13835 747 aa14.36□□□□□ -0.11
CCDC57-205ENST00000392346 FOXD4L5Q5VV16 416 aaPredicted RBP14.36□□□□□ -0.11
CCDC57-205ENST00000392346 AEBP1Q8IUX7 1158 aa14.36□□□□□ -0.11
CCDC57-205ENST00000392346 FOXD4L4Q8WXT5 416 aaPredicted RBP14.36□□□□□ -0.11
CCDC57-205ENST00000392346 FSD2A1L4K1 749 aa14.35□□□□□ -0.11
CCDC57-205ENST00000392346 PATL2C9JE40 543 aaKnown RBP14.35□□□□□ -0.11
CCDC57-205ENST00000392346 ZBTB7BO15156 539 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-205ENST00000392346 HSPA1LP34931 641 aa14.35□□□□□ -0.11
CCDC57-205ENST00000392346 TBX22Q9Y458 520 aa14.35□□□□□ -0.11
CCDC57-205ENST00000392346 STRCP1A6NGW2 1772 aa14.35□□□□□ -0.11
CCDC57-205ENST00000392346 VAMP4O75379 141 aa14.35□□□□□ -0.11
CCDC57-205ENST00000392346 CHRM1P11229 460 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-205ENST00000392346 L1TD1Q5T7N2 865 aaKnown RBP14.35□□□□□ -0.11
CCDC57-205ENST00000392346 MIS18AQ9NYP9 233 aa14.35□□□□□ -0.11
CCDC57-205ENST00000392346 ZFYVE9O95405 1425 aa14.35□□□□□ -0.11
CCDC57-205ENST00000392346 TSHZ3Q63HK5 1081 aa14.34□□□□□ -0.11
CCDC57-205ENST00000392346 GSPT1P15170 499 aaKnown RBP14.34□□□□□ -0.11
CCDC57-205ENST00000392346 KIF16BQ96L93 1317 aa14.34□□□□□ -0.11
CCDC57-205ENST00000392346 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
CCDC57-205ENST00000392346 HDGFL2Q7Z4V5 671 aaPredicted RBP14.34□□□□□ -0.11
CCDC57-205ENST00000392346 PIAS4Q8N2W9 510 aaPredicted RBP14.33□□□□□ -0.12
CCDC57-205ENST00000392346 MRPL50Q8N5N7 158 aaKnown RBP14.33□□□□□ -0.12
CCDC57-205ENST00000392346 GRPEL1Q9HAV7 217 aa14.33□□□□□ -0.12
CCDC57-205ENST00000392346 RBM33Q96EV2 1170 aaKnown RBP14.32□□□□□ -0.12
CCDC57-205ENST00000392346 TWISTNBQ3B726 338 aaPredicted RBP14.32□□□□□ -0.12
CCDC57-205ENST00000392346 USP32Q8NFA0 1604 aa14.32□□□□□ -0.12
CCDC57-205ENST00000392346 YTHDC2Q9H6S0 1430 aaKnown RBP14.31□□□□□ -0.12
CCDC57-205ENST00000392346 IPO8O15397 1037 aaKnown RBP14.31□□□□□ -0.12
CCDC57-205ENST00000392346 NSD2O96028 1365 aa14.31□□□□□ -0.12
CCDC57-205ENST00000392346 RPGRIP1LQ68CZ1 1315 aa14.31□□□□□ -0.12
CCDC57-205ENST00000392346 MSH6P52701 1360 aa14.31□□□□□ -0.12
CCDC57-205ENST00000392346 DTNBO60941 627 aa14.31□□□□□ -0.12
CCDC57-205ENST00000392346 MCM10Q7L590 875 aa14.31□□□□□ -0.12
CCDC57-205ENST00000392346 CLSTN1O94985 981 aa14.3□□□□□ -0.12
CCDC57-205ENST00000392346 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
CCDC57-205ENST00000392346 ZBTB7CA1YPR0 619 aa14.3□□□□□ -0.12
CCDC57-205ENST00000392346 RBM25P49756 843 aaKnown RBP14.3□□□□□ -0.12
CCDC57-205ENST00000392346 OS9Q13438 667 aaPredicted RBP14.3□□□□□ -0.12
CCDC57-205ENST00000392346 DDIT3P35638 169 aa14.29□□□□□ -0.12
CCDC57-205ENST00000392346 NFE2L2Q16236 605 aa14.29□□□□□ -0.12
CCDC57-205ENST00000392346 PLCD4Q9BRC7 762 aa14.29□□□□□ -0.12
CCDC57-205ENST00000392346 MAP2P11137 1827 aaKnown RBP14.29□□□□□ -0.12
CCDC57-205ENST00000392346 FOXD4L6Q3SYB3 417 aaPredicted RBP14.28□□□□□ -0.12
CCDC57-205ENST00000392346 FOXD4L3Q6VB84 417 aaPredicted RBP14.28□□□□□ -0.12
CCDC57-205ENST00000392346 FCHSD2O94868 740 aa14.28□□□□□ -0.12
CCDC57-205ENST00000392346 BMP2KLQ5H9B9 411 aa14.28□□□□□ -0.12
CCDC57-205ENST00000392346 PIK3R4Q99570 1358 aa14.28□□□□□ -0.12
CCDC57-205ENST00000392346 PNNQ9H307 717 aaKnown RBP14.28□□□□□ -0.12
CCDC57-205ENST00000392346 FAM135BQ49AJ0 1406 aa14.27□□□□□ -0.12
CCDC57-205ENST00000392346 CT47B1P0C2W7 299 aaPredicted RBP14.27□□□□□ -0.12
CCDC57-205ENST00000392346 ZGPATQ8N5A5 531 aaKnown RBP14.27□□□□□ -0.12
CCDC57-205ENST00000392346 AMOTL2Q9Y2J4 779 aa14.27□□□□□ -0.12
CCDC57-205ENST00000392346 F6X3S4 739 aa14.27□□□□□ -0.13
CCDC57-205ENST00000392346 K7ELQ4 463 aaPredicted RBP14.26□□□□□ -0.13
CCDC57-205ENST00000392346 FOXO3O43524 673 aa14.26□□□□□ -0.13
CCDC57-205ENST00000392346 KDM4AO75164 1064 aa14.26□□□□□ -0.13
CCDC57-205ENST00000392346 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
CCDC57-205ENST00000392346 DDX11L8A8MPP1 907 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 IL13P35225 146 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 MCTP1Q6DN14 999 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 SLC4A10Q6U841 1118 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 PLEKHM2Q8IWE5 1019 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 MEIS3Q99687 375 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 RBM27Q9P2N5 1060 aaKnown RBP14.25□□□□□ -0.13
CCDC57-205ENST00000392346 ADAMTS13Q76LX8 1427 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
CCDC57-205ENST00000392346 KNDC1Q76NI1 1749 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 ATF3P18847 181 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 IL16Q14005 1332 aa14.25□□□□□ -0.13
CCDC57-205ENST00000392346 PNPLA6Q8IY17 1366 aa14.24□□□□□ -0.13
CCDC57-205ENST00000392346 MRE11P49959 708 aa14.24□□□□□ -0.13
CCDC57-205ENST00000392346 SULT6B1Q6IMI4 303 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms