RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 MAP2P11137 1827 aaKnown RBP17.17■□□□□ 0.34
CCDC57-203ENST00000392343 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
CCDC57-203ENST00000392343 ST18O60284 1047 aa17.17■□□□□ 0.34
CCDC57-203ENST00000392343 TMEM63CQ9P1W3 806 aa17.17■□□□□ 0.34
CCDC57-203ENST00000392343 CEP85Q6P2H3 762 aa17.16■□□□□ 0.34
CCDC57-203ENST00000392343 FAM13BQ9NYF5 915 aa17.16■□□□□ 0.34
CCDC57-203ENST00000392343 MYO5BQ9ULV0 1848 aa17.16■□□□□ 0.34
CCDC57-203ENST00000392343 MCM10Q7L590 875 aa17.16■□□□□ 0.34
CCDC57-203ENST00000392343 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
CCDC57-203ENST00000392343 ANKRD44Q8N8A2 993 aa17.16■□□□□ 0.34
CCDC57-203ENST00000392343 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.16■□□□□ 0.34
CCDC57-203ENST00000392343 ZFYVE9O95405 1425 aa17.16■□□□□ 0.34
CCDC57-203ENST00000392343 MPNDQ8N594 471 aa17.15■□□□□ 0.34
CCDC57-203ENST00000392343 MIS18AQ9NYP9 233 aa17.15■□□□□ 0.34
CCDC57-203ENST00000392343 PIK3C2BO00750 1634 aa17.15■□□□□ 0.34
CCDC57-203ENST00000392343 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
CCDC57-203ENST00000392343 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
CCDC57-203ENST00000392343 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.34
CCDC57-203ENST00000392343 NEK4P51957 841 aa17.14■□□□□ 0.33
CCDC57-203ENST00000392343 CASC1Q6TDU7 716 aa17.14■□□□□ 0.33
CCDC57-203ENST00000392343 SLC52A1Q9NWF4 448 aa17.14■□□□□ 0.33
CCDC57-203ENST00000392343 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
CCDC57-203ENST00000392343 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.13■□□□□ 0.33
CCDC57-203ENST00000392343 MSH6P52701 1360 aa17.13■□□□□ 0.33
CCDC57-203ENST00000392343 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
CCDC57-203ENST00000392343 PDCL3Q9H2J4 239 aa17.12■□□□□ 0.33
CCDC57-203ENST00000392343 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
CCDC57-203ENST00000392343 RIMS2Q9UQ26 1411 aa17.12■□□□□ 0.33
CCDC57-203ENST00000392343 F6X3S4 739 aa17.12■□□□□ 0.33
CCDC57-203ENST00000392343 SOX12O15370 315 aa17.12■□□□□ 0.33
CCDC57-203ENST00000392343 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
CCDC57-203ENST00000392343 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
CCDC57-203ENST00000392343 KIF20BQ96Q89 1820 aa17.11■□□□□ 0.33
CCDC57-203ENST00000392343 ARHGEF40Q8TER5 1519 aa17.11■□□□□ 0.33
CCDC57-203ENST00000392343 ATP10DQ9P241 1426 aa17.11■□□□□ 0.33
CCDC57-203ENST00000392343 LMOD3Q0VAK6 560 aa17.11■□□□□ 0.33
CCDC57-203ENST00000392343 RPAP2Q8IXW5 612 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-203ENST00000392343 GDPD2Q9HCC8 539 aa17.11■□□□□ 0.33
CCDC57-203ENST00000392343 EXOC6BQ9Y2D4 811 aa17.11■□□□□ 0.33
CCDC57-203ENST00000392343 ERC2O15083 957 aa17.1■□□□□ 0.33
CCDC57-203ENST00000392343 REC8O95072 547 aa17.1■□□□□ 0.33
CCDC57-203ENST00000392343 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
CCDC57-203ENST00000392343 TMX3Q96JJ7 454 aa17.1■□□□□ 0.33
CCDC57-203ENST00000392343 PDLIM2Q96JY6 352 aa17.1■□□□□ 0.33
CCDC57-203ENST00000392343 DLG5Q8TDM6 1919 aa17.1■□□□□ 0.33
CCDC57-203ENST00000392343 LRSAM1Q6UWE0 723 aa17.09■□□□□ 0.33
CCDC57-203ENST00000392343 COG3Q96JB2 828 aa17.09■□□□□ 0.33
CCDC57-203ENST00000392343 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
CCDC57-203ENST00000392343 G2E3Q7L622 706 aa17.08■□□□□ 0.33
CCDC57-203ENST00000392343 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.08■□□□□ 0.33
CCDC57-203ENST00000392343 PALD1Q9ULE6 856 aa17.08■□□□□ 0.33
CCDC57-203ENST00000392343 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.32
CCDC57-203ENST00000392343 UQCRHP07919 91 aa17.08■□□□□ 0.32
CCDC57-203ENST00000392343 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.32
CCDC57-203ENST00000392343 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
CCDC57-203ENST00000392343 ZKSCAN5Q9Y2L8 839 aa17.07■□□□□ 0.32
CCDC57-203ENST00000392343 NUTM2FA1L443 756 aa17.07■□□□□ 0.32
CCDC57-203ENST00000392343 PDE1AP54750 535 aa17.07■□□□□ 0.32
CCDC57-203ENST00000392343 TXNDC2Q86VQ3 553 aa17.07■□□□□ 0.32
CCDC57-203ENST00000392343 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
CCDC57-203ENST00000392343 RGS12O14924 1447 aa17.06■□□□□ 0.32
CCDC57-203ENST00000392343 ZNF500O60304 480 aaPredicted RBP17.05■□□□□ 0.32
CCDC57-203ENST00000392343 NECTIN2Q92692 538 aa17.05■□□□□ 0.32
CCDC57-203ENST00000392343 ANO2Q9NQ90 1003 aa17.05■□□□□ 0.32
CCDC57-203ENST00000392343 ALKQ9UM73 1620 aa17.05■□□□□ 0.32
CCDC57-203ENST00000392343 TRIM6-TRIM34B2RNG4 842 aa17.05■□□□□ 0.32
CCDC57-203ENST00000392343 DTNBO60941 627 aa17.05■□□□□ 0.32
CCDC57-203ENST00000392343 PTMAP06454 111 aaKnown RBP17.05■□□□□ 0.32
CCDC57-203ENST00000392343 GADD45BO75293 160 aaPredicted RBP17.04■□□□□ 0.32
CCDC57-203ENST00000392343 FOXO3O43524 673 aa17.04■□□□□ 0.32
CCDC57-203ENST00000392343 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
CCDC57-203ENST00000392343 HS1BP3Q53T59 392 aa17.04■□□□□ 0.32
CCDC57-203ENST00000392343 JARID2Q92833 1246 aaPredicted RBP17.04■□□□□ 0.32
CCDC57-203ENST00000392343 ZNF830Q96NB3 372 aaPredicted RBP17.04■□□□□ 0.32
CCDC57-203ENST00000392343 YEATS2Q9ULM3 1422 aa17.04■□□□□ 0.32
CCDC57-203ENST00000392343 EIF4A2Q14240 407 aaKnown RBP17.03■□□□□ 0.32
CCDC57-203ENST00000392343 NUDT16Q96DE0 195 aaKnown RBP17.03■□□□□ 0.32
CCDC57-203ENST00000392343 CLTCQ00610 1675 aaKnown RBP17.03■□□□□ 0.32
CCDC57-203ENST00000392343 CHL1O00533 1208 aa17.03■□□□□ 0.32
CCDC57-203ENST00000392343 WASLO00401 505 aaPredicted RBP17.03■□□□□ 0.32
CCDC57-203ENST00000392343 LARP6Q9BRS8 491 aaKnown RBP17.03■□□□□ 0.32
CCDC57-203ENST00000392343 TMEM131LA2VDJ0 1609 aa17.02■□□□□ 0.32
CCDC57-203ENST00000392343 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.31
CCDC57-203ENST00000392343 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
CCDC57-203ENST00000392343 BRD1O95696 1058 aa17.01■□□□□ 0.31
CCDC57-203ENST00000392343 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
CCDC57-203ENST00000392343 ESYT1Q9BSJ8 1104 aa17.01■□□□□ 0.31
CCDC57-203ENST00000392343 HMMRO75330 724 aa17.01■□□□□ 0.31
CCDC57-203ENST00000392343 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
CCDC57-203ENST00000392343 CCDC39Q9UFE4 941 aa17.01■□□□□ 0.31
CCDC57-203ENST00000392343 MAP4K4O95819 1239 aaPredicted RBP17■□□□□ 0.31
CCDC57-203ENST00000392343 CPS1P31327 1500 aa17■□□□□ 0.31
CCDC57-203ENST00000392343 TSPY26PQ9H489 355 aa17■□□□□ 0.31
CCDC57-203ENST00000392343 PNMA6EA0A0J9YXQ4 647 aa16.99■□□□□ 0.31
CCDC57-203ENST00000392343 TSC1Q92574 1164 aa16.99■□□□□ 0.31
CCDC57-203ENST00000392343 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
CCDC57-203ENST00000392343 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
CCDC57-203ENST00000392343 DNTTIP2Q5QJE6 756 aaKnown RBP16.99■□□□□ 0.31
CCDC57-203ENST00000392343 IL25Q9H293 177 aa16.99■□□□□ 0.31
CCDC57-203ENST00000392343 ATP7BP35670 1465 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms