RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 SURF6O75683 361 aaKnown RBP20.21■□□□□ 0.83
TRAF3IP1-202ENST00000391993 UBXN4Q92575 508 aa20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 IQGAP2Q13576 1575 aa20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 FAM83GA6ND36 823 aa20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 GSPT1P15170 499 aaKnown RBP20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 ZKSCAN1P17029 563 aaPredicted RBP20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 CASTP20810 708 aaKnown RBP20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 IBSPP21815 317 aaPredicted RBP20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 KRT85P78386 507 aa20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 AEBP2Q6ZN18 517 aaPredicted RBP20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 TCEANC2Q96MN5 208 aa20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 MAGI3Q5TCQ9 1506 aa20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 ZNF608Q9ULD9 1512 aaPredicted RBP20.2■□□□□ 0.82
TRAF3IP1-202ENST00000391993 HAP1P54257 671 aaPredicted RBP20.19■□□□□ 0.82
TRAF3IP1-202ENST00000391993 CTTNBP2Q8WZ74 1663 aa20.19■□□□□ 0.82
TRAF3IP1-202ENST00000391993 STX6O43752 255 aa20.19■□□□□ 0.82
TRAF3IP1-202ENST00000391993 IRX3P78415 501 aaPredicted RBP20.19■□□□□ 0.82
TRAF3IP1-202ENST00000391993 DNAJC2Q99543 621 aaKnown RBP20.19■□□□□ 0.82
TRAF3IP1-202ENST00000391993 SPG7Q9UQ90 795 aa20.19■□□□□ 0.82
TRAF3IP1-202ENST00000391993 EFCAB2Q5VUJ9 269 aa20.19■□□□□ 0.82
TRAF3IP1-202ENST00000391993 FEZ1Q99689 392 aa20.19■□□□□ 0.82
TRAF3IP1-202ENST00000391993 ZNF165P49910 485 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 UVSSAQ2YD98 709 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 RSPH4AQ5TD94 716 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 NECAB1Q8N987 351 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 KIF18AQ8NI77 898 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 JAKMIP1Q96N16 626 aaKnown RBP20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 ELF2Q15723 593 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 SPATA32Q96LK8 384 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 KIAA0586Q9BVV6 1533 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 DHX37Q8IY37 1157 aaKnown RBP20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 PDILTQ8N807 584 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 EIF2S2P20042 333 aaKnown RBP20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 ANO6Q4KMQ2 910 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 PDLIM2Q96JY6 352 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 ZSWIM4Q9H7M6 989 aa20.18■□□□□ 0.82
TRAF3IP1-202ENST00000391993 PLB1Q6P1J6 1458 aa20.17■□□□□ 0.82
TRAF3IP1-202ENST00000391993 UBE2HP62256 183 aa20.17■□□□□ 0.82
TRAF3IP1-202ENST00000391993 URI1O94763 535 aaPredicted RBP20.17■□□□□ 0.82
TRAF3IP1-202ENST00000391993 TMCO3Q6UWJ1 677 aa20.17■□□□□ 0.82
TRAF3IP1-202ENST00000391993 DDX11Q96FC9 970 aa20.17■□□□□ 0.82
TRAF3IP1-202ENST00000391993 KRT24Q2M2I5 525 aa20.17■□□□□ 0.82
TRAF3IP1-202ENST00000391993 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
TRAF3IP1-202ENST00000391993 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
TRAF3IP1-202ENST00000391993 CCDC73Q6ZRK6 1079 aa20.16■□□□□ 0.82
TRAF3IP1-202ENST00000391993 ZNF710Q8N1W2 664 aa20.16■□□□□ 0.82
TRAF3IP1-202ENST00000391993 MEIS3Q99687 375 aa20.16■□□□□ 0.82
TRAF3IP1-202ENST00000391993 DNAJC25Q9H1X3 360 aa20.16■□□□□ 0.82
TRAF3IP1-202ENST00000391993 TPM4P67936 248 aa20.16■□□□□ 0.82
TRAF3IP1-202ENST00000391993 ZBTB7BO15156 539 aaPredicted RBP20.15■□□□□ 0.82
TRAF3IP1-202ENST00000391993 KIF2CQ99661 725 aa20.15■□□□□ 0.82
TRAF3IP1-202ENST00000391993 TROQ12816 1431 aaPredicted RBP20.15■□□□□ 0.82
TRAF3IP1-202ENST00000391993 LMAN1P49257 510 aa20.15■□□□□ 0.82
TRAF3IP1-202ENST00000391993 LMOD3Q0VAK6 560 aa20.15■□□□□ 0.82
TRAF3IP1-202ENST00000391993 IPO4Q8TEX9 1081 aaKnown RBP20.15■□□□□ 0.82
TRAF3IP1-202ENST00000391993 SKILP12757 684 aa20.14■□□□□ 0.82
TRAF3IP1-202ENST00000391993 LRRCC1Q9C099 1032 aa20.14■□□□□ 0.82
TRAF3IP1-202ENST00000391993 NRBP1Q9UHY1 535 aa20.14■□□□□ 0.82
TRAF3IP1-202ENST00000391993 DACT1Q9NYF0 836 aa20.14■□□□□ 0.81
TRAF3IP1-202ENST00000391993 LAMC3Q9Y6N6 1575 aa20.14■□□□□ 0.81
TRAF3IP1-202ENST00000391993 STK11IPQ8N1F8 1099 aa20.14■□□□□ 0.81
TRAF3IP1-202ENST00000391993 LTV1Q96GA3 475 aaPredicted RBP20.14■□□□□ 0.81
TRAF3IP1-202ENST00000391993 COL17A1Q9UMD9 1497 aaPredicted RBP20.14■□□□□ 0.81
TRAF3IP1-202ENST00000391993 MAGI2Q86UL8 1455 aa20.13■□□□□ 0.81
TRAF3IP1-202ENST00000391993 GJB2P29033 226 aa20.13■□□□□ 0.81
TRAF3IP1-202ENST00000391993 CCDC34Q96HJ3 373 aa20.13■□□□□ 0.81
TRAF3IP1-202ENST00000391993 CWC15Q9P013 229 aaKnown RBP20.13■□□□□ 0.81
TRAF3IP1-202ENST00000391993 ASXL1Q8IXJ9 1541 aa20.12■□□□□ 0.81
TRAF3IP1-202ENST00000391993 ZSCAN22P10073 491 aaPredicted RBP20.12■□□□□ 0.81
TRAF3IP1-202ENST00000391993 LEKR1Q6ZMV7 388 aa20.12■□□□□ 0.81
TRAF3IP1-202ENST00000391993 ZNF215Q9UL58 517 aaPredicted RBP20.12■□□□□ 0.81
TRAF3IP1-202ENST00000391993 KDM5CP41229 1560 aa20.11■□□□□ 0.81
TRAF3IP1-202ENST00000391993 KINO60870 393 aaKnown RBP20.11■□□□□ 0.81
TRAF3IP1-202ENST00000391993 NEK11Q8NG66 645 aa20.11■□□□□ 0.81
TRAF3IP1-202ENST00000391993 SMTNL1A8MU46 457 aa20.11■□□□□ 0.81
TRAF3IP1-202ENST00000391993 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
TRAF3IP1-202ENST00000391993 PALD1Q9ULE6 856 aa20.11■□□□□ 0.81
TRAF3IP1-202ENST00000391993 ISM2Q6H9L7 571 aa20.11■□□□□ 0.81
TRAF3IP1-202ENST00000391993 PRPF40BQ6NWY9 871 aaKnown RBP20.11■□□□□ 0.81
TRAF3IP1-202ENST00000391993 FAM200AQ8TCP9 573 aa20.11■□□□□ 0.81
TRAF3IP1-202ENST00000391993 PDRG1Q9NUG6 133 aa20.1■□□□□ 0.81
TRAF3IP1-202ENST00000391993 ALDH1L2Q3SY69 923 aa20.1■□□□□ 0.81
TRAF3IP1-202ENST00000391993 RPAP2Q8IXW5 612 aaPredicted RBP20.1■□□□□ 0.81
TRAF3IP1-202ENST00000391993 TSPYL4Q9UJ04 414 aa20.1■□□□□ 0.81
TRAF3IP1-202ENST00000391993 TYRO3Q06418 890 aa20.1■□□□□ 0.81
TRAF3IP1-202ENST00000391993 BMS1Q14692 1282 aaKnown RBP20.1■□□□□ 0.81
TRAF3IP1-202ENST00000391993 MCM10Q7L590 875 aa20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 ZNF397Q8NF99 534 aaPredicted RBP20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 UHRF1BP1Q6BDS2 1440 aa20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 TCOF1Q13428 1488 aaKnown RBP20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 SYT1P21579 422 aa20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 ZDHHC9Q9Y397 364 aa20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 PAXBP1Q9Y5B6 917 aa20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 NOM1Q5C9Z4 860 aaKnown RBP20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 ST7Q9NRC1 585 aa20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 MBIPQ9NS73 344 aa20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 CYP46A1Q9Y6A2 500 aa20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 INSRP06213 1382 aa20.09■□□□□ 0.81
TRAF3IP1-202ENST00000391993 SCAPERQ9BY12 1400 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms