RNA–Protein interactions for RNA: ENST00000391249.2

U3.28-201, humanhuman

BASIC

Gene U3, Length 210 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.28-201ENST00000391249 NR1H3Q13133 447 aa8.71□□□□□ -1.02
U3.28-201ENST00000391249 IRF7Q92985 503 aa8.71□□□□□ -1.02
U3.28-201ENST00000391249 AGBL1Q96MI9 1066 aa8.71□□□□□ -1.02
U3.28-201ENST00000391249 ERBB4Q15303 1308 aa8.71□□□□□ -1.02
U3.28-201ENST00000391249 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
U3.28-201ENST00000391249 KDF1Q8NAX2 398 aaPredicted RBP8.7□□□□□ -1.02
U3.28-201ENST00000391249 PCDHB9Q9Y5E1 797 aa8.7□□□□□ -1.02
U3.28-201ENST00000391249 GMPRP36959 345 aa8.69□□□□□ -1.02
U3.28-201ENST00000391249 CEP162Q5TB80 1403 aa8.69□□□□□ -1.02
U3.28-201ENST00000391249 MCCD1P59942 119 aaPredicted RBP8.68□□□□□ -1.02
U3.28-201ENST00000391249 RELBQ01201 579 aa8.68□□□□□ -1.02
U3.28-201ENST00000391249 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.68□□□□□ -1.02
U3.28-201ENST00000391249 TNIKQ9UKE5 1360 aa8.68□□□□□ -1.02
U3.28-201ENST00000391249 FIGNL2A6NMB9 653 aa8.67□□□□□ -1.02
U3.28-201ENST00000391249 APBB1O00213 710 aa8.67□□□□□ -1.02
U3.28-201ENST00000391249 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
U3.28-201ENST00000391249 ADH1AP07327 375 aa8.67□□□□□ -1.02
U3.28-201ENST00000391249 VSIG8P0DPA2 414 aa8.67□□□□□ -1.02
U3.28-201ENST00000391249 CTSOP43234 321 aaPredicted RBP8.67□□□□□ -1.02
U3.28-201ENST00000391249 ZNF395Q9H8N7 513 aaPredicted RBP8.67□□□□□ -1.02
U3.28-201ENST00000391249 CUX1P39880 1505 aa8.66□□□□□ -1.02
U3.28-201ENST00000391249 CFTRP13569 1480 aa8.66□□□□□ -1.02
U3.28-201ENST00000391249 INSM1Q01101 510 aaPredicted RBP8.66□□□□□ -1.02
U3.28-201ENST00000391249 INSM2Q96T92 566 aaPredicted RBP8.66□□□□□ -1.02
U3.28-201ENST00000391249 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
U3.28-201ENST00000391249 PTGIRP43119 386 aa8.65□□□□□ -1.02
U3.28-201ENST00000391249 PTSQ03393 145 aa8.65□□□□□ -1.02
U3.28-201ENST00000391249 CCDC125Q86Z20 511 aa8.65□□□□□ -1.02
U3.28-201ENST00000391249 CYLDQ9NQC7 956 aa8.65□□□□□ -1.02
U3.28-201ENST00000391249 TBC1D2BQ9UPU7 963 aa8.65□□□□□ -1.02
U3.28-201ENST00000391249 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
U3.28-201ENST00000391249 ZNF330Q9Y3S2 320 aaPredicted RBP8.64□□□□□ -1.03
U3.28-201ENST00000391249 ERICH3Q5RHP9 1530 aa8.64□□□□□ -1.03
U3.28-201ENST00000391249 ERVK-9P63128 1117 aa8.63□□□□□ -1.03
U3.28-201ENST00000391249 RNF20Q5VTR2 975 aa8.63□□□□□ -1.03
U3.28-201ENST00000391249 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
U3.28-201ENST00000391249 ZNF592Q92610 1267 aa8.63□□□□□ -1.03
U3.28-201ENST00000391249 IRF5Q13568 498 aa8.62□□□□□ -1.03
U3.28-201ENST00000391249 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
U3.28-201ENST00000391249 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
U3.28-201ENST00000391249 POLMQ9NP87 494 aaPredicted RBP8.62□□□□□ -1.03
U3.28-201ENST00000391249 SLC35F4A4IF30 521 aa8.61□□□□□ -1.03
U3.28-201ENST00000391249 CC2D2BQ6DHV5 1058 aa8.61□□□□□ -1.03
U3.28-201ENST00000391249 CEP126Q9P2H0 1117 aa8.61□□□□□ -1.03
U3.28-201ENST00000391249 STK17AQ9UEE5 414 aa8.61□□□□□ -1.03
U3.28-201ENST00000391249 ATP5J2-PTCD1G3V325 749 aa8.6□□□□□ -1.03
U3.28-201ENST00000391249 SCTRP47872 440 aa8.6□□□□□ -1.03
U3.28-201ENST00000391249 CCDC155Q8N6L0 562 aa8.6□□□□□ -1.03
U3.28-201ENST00000391249 PRM3Q9NNZ6 103 aa8.59□□□□□ -1.03
U3.28-201ENST00000391249 LAMC3Q9Y6N6 1575 aa8.59□□□□□ -1.03
U3.28-201ENST00000391249 CTTNBP2Q8WZ74 1663 aa8.59□□□□□ -1.03
U3.28-201ENST00000391249 RAPGEF2Q9Y4G8 1499 aa8.58□□□□□ -1.04
U3.28-201ENST00000391249 KIF27Q86VH2 1401 aa8.58□□□□□ -1.04
U3.28-201ENST00000391249 SENP3-EIF4A1A0A087X0R7 540 aa8.58□□□□□ -1.04
U3.28-201ENST00000391249 ZEB1P37275 1124 aaPredicted RBP8.58□□□□□ -1.04
U3.28-201ENST00000391249 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
U3.28-201ENST00000391249 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
U3.28-201ENST00000391249 NANOS1Q8WY41 292 aaKnown RBP8.58□□□□□ -1.04
U3.28-201ENST00000391249 PCDHB11Q9Y5F2 797 aa8.58□□□□□ -1.04
U3.28-201ENST00000391249 KIF21AQ7Z4S6 1674 aa8.58□□□□□ -1.04
U3.28-201ENST00000391249 CADPSQ9ULU8 1353 aa8.58□□□□□ -1.04
U3.28-201ENST00000391249 DNMBPQ6XZF7 1577 aa8.57□□□□□ -1.04
U3.28-201ENST00000391249 CLIP1P30622 1438 aa8.57□□□□□ -1.04
U3.28-201ENST00000391249 A0A1W2PRU2 124 aa8.57□□□□□ -1.04
U3.28-201ENST00000391249 TRAK2O60296 914 aa8.57□□□□□ -1.04
U3.28-201ENST00000391249 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
U3.28-201ENST00000391249 GDPD2Q9HCC8 539 aa8.57□□□□□ -1.04
U3.28-201ENST00000391249 WDR97A6NE52 1622 aa8.56□□□□□ -1.04
U3.28-201ENST00000391249 MCM6Q14566 821 aa8.56□□□□□ -1.04
U3.28-201ENST00000391249 PPARGC1BQ86YN6 1023 aaKnown RBP8.56□□□□□ -1.04
U3.28-201ENST00000391249 PHTF2Q8N3S3 785 aa8.56□□□□□ -1.04
U3.28-201ENST00000391249 ZSCAN1Q8NBB4 408 aa8.56□□□□□ -1.04
U3.28-201ENST00000391249 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
U3.28-201ENST00000391249 GPC1P35052 558 aa8.55□□□□□ -1.04
U3.28-201ENST00000391249 EIF4G2P78344 907 aaKnown RBP eCLIP8.55□□□□□ -1.04
U3.28-201ENST00000391249 LYSMD3Q7Z3D4 306 aa8.55□□□□□ -1.04
U3.28-201ENST00000391249 CDCA7Q9BWT1 371 aaPredicted RBP8.55□□□□□ -1.04
U3.28-201ENST00000391249 FANCD2Q9BXW9 1451 aa8.55□□□□□ -1.04
U3.28-201ENST00000391249 CUL7Q14999 1698 aa8.54□□□□□ -1.04
U3.28-201ENST00000391249 FGD5Q6ZNL6 1462 aa8.54□□□□□ -1.04
U3.28-201ENST00000391249 ITGA6P23229 1130 aa8.54□□□□□ -1.04
U3.28-201ENST00000391249 TSGA10IPQ3SY00 556 aa8.54□□□□□ -1.04
U3.28-201ENST00000391249 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
U3.28-201ENST00000391249 PRXQ9BXM0 1461 aa8.53□□□□□ -1.04
U3.28-201ENST00000391249 MEN1O00255 615 aa8.53□□□□□ -1.04
U3.28-201ENST00000391249 KRT76Q01546 638 aa8.53□□□□□ -1.04
U3.28-201ENST00000391249 VAC14Q08AM6 782 aa8.53□□□□□ -1.04
U3.28-201ENST00000391249 PRICKLE2Q7Z3G6 844 aa8.53□□□□□ -1.04
U3.28-201ENST00000391249 VPS8Q8N3P4 1428 aa8.53□□□□□ -1.04
U3.28-201ENST00000391249 CUX2O14529 1486 aa8.52□□□□□ -1.05
U3.28-201ENST00000391249 ABL2P42684 1182 aa8.52□□□□□ -1.05
U3.28-201ENST00000391249 CLN3Q13286 438 aa8.52□□□□□ -1.05
U3.28-201ENST00000391249 GRIP2Q9C0E4 1043 aa8.52□□□□□ -1.05
U3.28-201ENST00000391249 CHIC2Q9UKJ5 165 aa8.52□□□□□ -1.05
U3.28-201ENST00000391249 VWA5B2Q8N398 1253 aa8.51□□□□□ -1.05
U3.28-201ENST00000391249 GNRH1P01148 92 aa8.5□□□□□ -1.05
U3.28-201ENST00000391249 WASHC4Q2M389 1173 aa8.5□□□□□ -1.05
U3.28-201ENST00000391249 ARHGEF10LQ9HCE6 1279 aa8.5□□□□□ -1.05
U3.28-201ENST00000391249 COG6Q9Y2V7 657 aa8.5□□□□□ -1.05
U3.28-201ENST00000391249 PBRM1Q86U86 1689 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms