RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
PPFIA1-202ENST00000389547 CAVIN1Q6NZI2 390 aaKnown RBP23.03■■□□□ 1.28
PPFIA1-202ENST00000389547 NPHP1O15259 732 aa23.02■■□□□ 1.28
PPFIA1-202ENST00000389547 ADGRB3O60242 1522 aa23.02■■□□□ 1.28
PPFIA1-202ENST00000389547 C9orf78Q9NZ63 289 aaPredicted RBP23.02■■□□□ 1.28
PPFIA1-202ENST00000389547 EYA1Q99502 592 aa23.02■■□□□ 1.28
PPFIA1-202ENST00000389547 KRT24Q2M2I5 525 aa23.01■■□□□ 1.27
PPFIA1-202ENST00000389547 AEBP2Q6ZN18 517 aaPredicted RBP23.01■■□□□ 1.27
PPFIA1-202ENST00000389547 PLEKHG1Q9ULL1 1385 aa23.01■■□□□ 1.27
PPFIA1-202ENST00000389547 PLEKHG3A1L390 1219 aa23.01■■□□□ 1.27
PPFIA1-202ENST00000389547 CCDC30Q5VVM6 783 aa23.01■■□□□ 1.27
PPFIA1-202ENST00000389547 MPNDQ8N594 471 aa23.01■■□□□ 1.27
PPFIA1-202ENST00000389547 EDC4Q6P2E9 1401 aaKnown RBP23■■□□□ 1.27
PPFIA1-202ENST00000389547 FRMPD1Q5SYB0 1578 aa23■■□□□ 1.27
PPFIA1-202ENST00000389547 FOXD4L6Q3SYB3 417 aaPredicted RBP23■■□□□ 1.27
PPFIA1-202ENST00000389547 FOXD4L3Q6VB84 417 aaPredicted RBP23■■□□□ 1.27
PPFIA1-202ENST00000389547 IFT57Q9NWB7 429 aa23■■□□□ 1.27
PPFIA1-202ENST00000389547 GCP02774 474 aa23■■□□□ 1.27
PPFIA1-202ENST00000389547 TRIM27P14373 513 aa23■■□□□ 1.27
PPFIA1-202ENST00000389547 TRIM6-TRIM34B2RNG4 842 aa22.99■■□□□ 1.27
PPFIA1-202ENST00000389547 CT47B1P0C2W7 299 aaPredicted RBP22.99■■□□□ 1.27
PPFIA1-202ENST00000389547 IL13P35225 146 aa22.99■■□□□ 1.27
PPFIA1-202ENST00000389547 CFAP44Q96MT7 982 aa22.99■■□□□ 1.27
PPFIA1-202ENST00000389547 ANKRD24Q8TF21 1146 aa22.98■■□□□ 1.27
PPFIA1-202ENST00000389547 CAMSAP1Q5T5Y3 1602 aa22.98■■□□□ 1.27
PPFIA1-202ENST00000389547 TSPYL6Q8N831 410 aa22.98■■□□□ 1.27
PPFIA1-202ENST00000389547 SIRT1Q96EB6 747 aa22.98■■□□□ 1.27
PPFIA1-202ENST00000389547 ZFYVE9O95405 1425 aa22.98■■□□□ 1.27
PPFIA1-202ENST00000389547 BTBD11A6QL63 1104 aa22.97■■□□□ 1.27
PPFIA1-202ENST00000389547 SEC24BO95487 1268 aa22.97■■□□□ 1.27
PPFIA1-202ENST00000389547 MTHFSDQ2M296 383 aaKnown RBP22.97■■□□□ 1.27
PPFIA1-202ENST00000389547 F6X3S4 739 aa22.96■■□□□ 1.27
PPFIA1-202ENST00000389547 C8orf58Q8NAV2 365 aa22.96■■□□□ 1.27
PPFIA1-202ENST00000389547 MSH6P52701 1360 aa22.95■■□□□ 1.26
PPFIA1-202ENST00000389547 MAPK8IP2Q13387 824 aaPredicted RBP22.95■■□□□ 1.26
PPFIA1-202ENST00000389547 DRC7Q8IY82 874 aa22.95■■□□□ 1.26
PPFIA1-202ENST00000389547 CLTCQ00610 1675 aaKnown RBP22.94■■□□□ 1.26
PPFIA1-202ENST00000389547 ADAMTS2O95450 1211 aa22.94■■□□□ 1.26
PPFIA1-202ENST00000389547 PDE4CQ08493 712 aa22.94■■□□□ 1.26
PPFIA1-202ENST00000389547 GLI2P10070 1586 aa22.94■■□□□ 1.26
PPFIA1-202ENST00000389547 TRIM35Q9UPQ4 493 aa22.94■■□□□ 1.26
PPFIA1-202ENST00000389547 KAT6BQ8WYB5 2073 aa22.94■■□□□ 1.26
PPFIA1-202ENST00000389547 IGHDP01880 384 aa22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 RIC3Q7Z5B4 369 aa22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 HOXC9P31274 260 aa22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 NEXNQ0ZGT2 675 aa22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 FLT4P35916 1363 aa22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 TNNT3P45378 269 aaPredicted RBP22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 TAF7Q15545 349 aaPredicted RBP22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 CCDC27Q2M243 656 aa22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 NOL8Q76FK4 1167 aaKnown RBP22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 RLBP1P12271 317 aa22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 MYL6BP14649 208 aa22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 KCNJ4P48050 445 aa22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 SYAP1Q96A49 352 aaPredicted RBP22.93■■□□□ 1.26
PPFIA1-202ENST00000389547 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
PPFIA1-202ENST00000389547 CBX1P83916 185 aa22.92■■□□□ 1.26
PPFIA1-202ENST00000389547 ALKQ9UM73 1620 aa22.92■■□□□ 1.26
PPFIA1-202ENST00000389547 ANXA1P04083 346 aa22.91■■□□□ 1.26
PPFIA1-202ENST00000389547 CABP4P57796 275 aa22.91■■□□□ 1.26
PPFIA1-202ENST00000389547 SPG7Q9UQ90 795 aa22.91■■□□□ 1.26
PPFIA1-202ENST00000389547 NPHP3Q7Z494 1330 aa22.91■■□□□ 1.26
PPFIA1-202ENST00000389547 SYNMO15061 1565 aa22.9■■□□□ 1.26
PPFIA1-202ENST00000389547 RILPL2Q969X0 211 aa22.9■■□□□ 1.26
PPFIA1-202ENST00000389547 PTCD1O75127 700 aaKnown RBP22.9■■□□□ 1.26
PPFIA1-202ENST00000389547 UBTFL1P0CB47 393 aaPredicted RBP22.9■■□□□ 1.26
PPFIA1-202ENST00000389547 CCDC39Q9UFE4 941 aa22.89■■□□□ 1.26
PPFIA1-202ENST00000389547 DDX58O95786 925 aaKnown RBP22.89■■□□□ 1.26
PPFIA1-202ENST00000389547 BBXQ8WY36 941 aaPredicted RBP22.89■■□□□ 1.26
PPFIA1-202ENST00000389547 RBM42Q9BTD8 480 aaKnown RBP22.89■■□□□ 1.25
PPFIA1-202ENST00000389547 BCL11BQ9C0K0 894 aaPredicted RBP22.88■■□□□ 1.25
PPFIA1-202ENST00000389547 TNPO1Q92973 898 aaKnown RBP22.88■■□□□ 1.25
PPFIA1-202ENST00000389547 TBC1D32Q96NH3 1257 aa22.87■■□□□ 1.25
PPFIA1-202ENST00000389547 BLMP54132 1417 aaPredicted RBP22.87■■□□□ 1.25
PPFIA1-202ENST00000389547 VWDEQ8N2E2 1590 aa22.86■■□□□ 1.25
PPFIA1-202ENST00000389547 ALDH1L2Q3SY69 923 aa22.85■■□□□ 1.25
PPFIA1-202ENST00000389547 TAF7LQ5H9L4 462 aa22.85■■□□□ 1.25
PPFIA1-202ENST00000389547 NEXMIFQ5QGS0 1516 aa22.85■■□□□ 1.25
PPFIA1-202ENST00000389547 IL16Q14005 1332 aa22.85■■□□□ 1.25
PPFIA1-202ENST00000389547 PRPF40AO75400 957 aaKnown RBP22.85■■□□□ 1.25
PPFIA1-202ENST00000389547 MROH1Q8NDA8 1641 aa22.85■■□□□ 1.25
PPFIA1-202ENST00000389547 PCDHB15Q9Y5E8 787 aa22.84■■□□□ 1.25
PPFIA1-202ENST00000389547 AAMPQ13685 434 aa22.84■■□□□ 1.25
PPFIA1-202ENST00000389547 HDAC5Q9UQL6 1122 aa22.84■■□□□ 1.25
PPFIA1-202ENST00000389547 AGLP35573 1532 aa22.83■■□□□ 1.25
PPFIA1-202ENST00000389547 AMOTQ4VCS5 1084 aa22.83■■□□□ 1.25
PPFIA1-202ENST00000389547 IP6K1Q92551 441 aa22.83■■□□□ 1.25
PPFIA1-202ENST00000389547 VAMP4O75379 141 aa22.83■■□□□ 1.25
PPFIA1-202ENST00000389547 TAOK2Q9UL54 1235 aa22.82■■□□□ 1.24
PPFIA1-202ENST00000389547 SURF6O75683 361 aaKnown RBP22.82■■□□□ 1.24
PPFIA1-202ENST00000389547 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
PPFIA1-202ENST00000389547 SLC39A6Q13433 755 aa22.82■■□□□ 1.24
PPFIA1-202ENST00000389547 ST18O60284 1047 aa22.81■■□□□ 1.24
PPFIA1-202ENST00000389547 NBPF6Q5VWK0 638 aa22.81■■□□□ 1.24
PPFIA1-202ENST00000389547 NBPF4Q96M43 638 aa22.81■■□□□ 1.24
PPFIA1-202ENST00000389547 TMEM94Q12767 1356 aa22.81■■□□□ 1.24
PPFIA1-202ENST00000389547 GNAI3P08754 354 aa22.81■■□□□ 1.24
PPFIA1-202ENST00000389547 NUCB2P80303 420 aa22.81■■□□□ 1.24
PPFIA1-202ENST00000389547 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
PPFIA1-202ENST00000389547 NPHP4O75161 1426 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms