RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 C8orf58Q8NAV2 365 aa20.59■□□□□ 0.89
LOH12CR2-201ENST00000381800 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
LOH12CR2-201ENST00000381800 RBM33Q96EV2 1170 aaKnown RBP20.59■□□□□ 0.89
LOH12CR2-201ENST00000381800 ORAI2Q96SN7 254 aa20.59■□□□□ 0.89
LOH12CR2-201ENST00000381800 API5Q9BZZ5 524 aaKnown RBP20.59■□□□□ 0.89
LOH12CR2-201ENST00000381800 ALS2Q96Q42 1657 aa20.59■□□□□ 0.89
LOH12CR2-201ENST00000381800 ABCC4O15439 1325 aa20.59■□□□□ 0.89
LOH12CR2-201ENST00000381800 DCTN1Q14203 1278 aa20.58■□□□□ 0.89
LOH12CR2-201ENST00000381800 NUTM2GQ5VZR2 741 aa20.58■□□□□ 0.89
LOH12CR2-201ENST00000381800 TMEM57Q8N5G2 664 aa20.58■□□□□ 0.89
LOH12CR2-201ENST00000381800 ZBTB40Q9NUA8 1239 aa20.58■□□□□ 0.89
LOH12CR2-201ENST00000381800 ANP32AP39687 249 aaKnown RBP20.58■□□□□ 0.88
LOH12CR2-201ENST00000381800 TMEM94Q12767 1356 aa20.58■□□□□ 0.88
LOH12CR2-201ENST00000381800 CAMTA1Q9Y6Y1 1673 aa20.57■□□□□ 0.88
LOH12CR2-201ENST00000381800 FAM161AQ3B820 660 aa20.57■□□□□ 0.88
LOH12CR2-201ENST00000381800 ARHGEF25Q86VW2 580 aa20.57■□□□□ 0.88
LOH12CR2-201ENST00000381800 ITPRIPQ8IWB1 547 aa20.57■□□□□ 0.88
LOH12CR2-201ENST00000381800 MCM10Q7L590 875 aa20.56■□□□□ 0.88
LOH12CR2-201ENST00000381800 LMTK3Q96Q04 1460 aa20.55■□□□□ 0.88
LOH12CR2-201ENST00000381800 MAP3K5Q99683 1374 aa20.55■□□□□ 0.88
LOH12CR2-201ENST00000381800 GNAT3A8MTJ3 354 aa20.55■□□□□ 0.88
LOH12CR2-201ENST00000381800 KRT28Q7Z3Y7 464 aa20.55■□□□□ 0.88
LOH12CR2-201ENST00000381800 FOXO3O43524 673 aa20.54■□□□□ 0.88
LOH12CR2-201ENST00000381800 GCP02774 474 aa20.54■□□□□ 0.88
LOH12CR2-201ENST00000381800 ATF3P18847 181 aa20.54■□□□□ 0.88
LOH12CR2-201ENST00000381800 ABCC6O95255 1503 aa20.54■□□□□ 0.88
LOH12CR2-201ENST00000381800 MSH6P52701 1360 aa20.54■□□□□ 0.88
LOH12CR2-201ENST00000381800 CADPS2Q86UW7 1296 aa20.53■□□□□ 0.88
LOH12CR2-201ENST00000381800 PTPRCP08575 1304 aa20.52■□□□□ 0.88
LOH12CR2-201ENST00000381800 VIRMAQ69YN4 1812 aaKnown RBP20.52■□□□□ 0.88
LOH12CR2-201ENST00000381800 PLEKHG2Q9H7P9 1386 aa20.51■□□□□ 0.87
LOH12CR2-201ENST00000381800 ZBTB7BO15156 539 aaPredicted RBP20.51■□□□□ 0.87
LOH12CR2-201ENST00000381800 SMC5Q8IY18 1101 aa20.51■□□□□ 0.87
LOH12CR2-201ENST00000381800 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
LOH12CR2-201ENST00000381800 C8orf34Q49A92 452 aa20.5■□□□□ 0.87
LOH12CR2-201ENST00000381800 SKAP1Q86WV1 359 aa20.5■□□□□ 0.87
LOH12CR2-201ENST00000381800 OVOS2A0A0G2JMS6 1433 aa20.5■□□□□ 0.87
LOH12CR2-201ENST00000381800 MYT1Q01538 1121 aa20.49■□□□□ 0.87
LOH12CR2-201ENST00000381800 IPO9Q96P70 1041 aaKnown RBP20.49■□□□□ 0.87
LOH12CR2-201ENST00000381800 PDZRN3Q9UPQ7 1066 aa20.49■□□□□ 0.87
LOH12CR2-201ENST00000381800 CEMIPQ8WUJ3 1361 aa20.49■□□□□ 0.87
LOH12CR2-201ENST00000381800 LMO7Q8WWI1 1683 aa20.49■□□□□ 0.87
LOH12CR2-201ENST00000381800 ELL2O00472 640 aaPredicted RBP20.48■□□□□ 0.87
LOH12CR2-201ENST00000381800 INTS3Q68E01 1043 aaKnown RBP20.48■□□□□ 0.87
LOH12CR2-201ENST00000381800 TSPYL4Q9UJ04 414 aa20.48■□□□□ 0.87
LOH12CR2-201ENST00000381800 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
LOH12CR2-201ENST00000381800 RGS3P49796 1198 aa20.48■□□□□ 0.87
LOH12CR2-201ENST00000381800 NBPF6Q5VWK0 638 aa20.48■□□□□ 0.87
LOH12CR2-201ENST00000381800 NBPF4Q96M43 638 aa20.48■□□□□ 0.87
LOH12CR2-201ENST00000381800 NPHP3Q7Z494 1330 aa20.47■□□□□ 0.87
LOH12CR2-201ENST00000381800 RGS12O14924 1447 aa20.47■□□□□ 0.87
LOH12CR2-201ENST00000381800 AMOTQ4VCS5 1084 aa20.47■□□□□ 0.87
LOH12CR2-201ENST00000381800 STRCQ7RTU9 1775 aa20.46■□□□□ 0.87
LOH12CR2-201ENST00000381800 TAF7Q15545 349 aaPredicted RBP20.46■□□□□ 0.87
LOH12CR2-201ENST00000381800 LTV1Q96GA3 475 aaPredicted RBP20.46■□□□□ 0.87
LOH12CR2-201ENST00000381800 XIRP1Q702N8 1843 aaKnown RBP20.46■□□□□ 0.87
LOH12CR2-201ENST00000381800 IL17REQ8NFR9 667 aa20.45■□□□□ 0.86
LOH12CR2-201ENST00000381800 TNS3Q68CZ2 1445 aa20.44■□□□□ 0.86
LOH12CR2-201ENST00000381800 CHMP4AQ9BY43 222 aa20.44■□□□□ 0.86
LOH12CR2-201ENST00000381800 PXDNQ92626 1479 aa20.44■□□□□ 0.86
LOH12CR2-201ENST00000381800 RGPD2P0DJD1 1756 aa20.44■□□□□ 0.86
LOH12CR2-201ENST00000381800 PLEKHO1Q53GL0 409 aaPredicted RBP20.43■□□□□ 0.86
LOH12CR2-201ENST00000381800 CACNB1Q02641 598 aaPredicted RBP20.43■□□□□ 0.86
LOH12CR2-201ENST00000381800 AKAP4Q5JQC9 854 aa20.43■□□□□ 0.86
LOH12CR2-201ENST00000381800 GCC1Q96CN9 775 aa20.43■□□□□ 0.86
LOH12CR2-201ENST00000381800 FAM208AQ9UK61 1670 aaKnown RBP20.42■□□□□ 0.86
LOH12CR2-201ENST00000381800 CRYBG1Q9Y4K1 1723 aa20.42■□□□□ 0.86
LOH12CR2-201ENST00000381800 XPCQ01831 940 aaPredicted RBP20.42■□□□□ 0.86
LOH12CR2-201ENST00000381800 COL18A1P39060 1754 aa20.41■□□□□ 0.86
LOH12CR2-201ENST00000381800 ADAMTS7Q9UKP4 1686 aa20.41■□□□□ 0.86
LOH12CR2-201ENST00000381800 KDM4FA0A1W2PPD8 638 aa20.41■□□□□ 0.86
LOH12CR2-201ENST00000381800 HOXB7P09629 217 aa20.41■□□□□ 0.86
LOH12CR2-201ENST00000381800 KRT24Q2M2I5 525 aa20.41■□□□□ 0.86
LOH12CR2-201ENST00000381800 ANKRD24Q8TF21 1146 aa20.41■□□□□ 0.86
LOH12CR2-201ENST00000381800 ANP32EQ9BTT0 268 aa20.41■□□□□ 0.86
LOH12CR2-201ENST00000381800 KDM3BQ7LBC6 1761 aa20.41■□□□□ 0.86
LOH12CR2-201ENST00000381800 HSPA2P54652 639 aa20.4■□□□□ 0.86
LOH12CR2-201ENST00000381800 DDRGK1Q96HY6 314 aa20.4■□□□□ 0.86
LOH12CR2-201ENST00000381800 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
LOH12CR2-201ENST00000381800 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.85
LOH12CR2-201ENST00000381800 NOP58Q9Y2X3 529 aaKnown RBP20.39■□□□□ 0.85
LOH12CR2-201ENST00000381800 NUCB1Q02818 461 aa20.38■□□□□ 0.85
LOH12CR2-201ENST00000381800 CPDO75976 1380 aa20.38■□□□□ 0.85
LOH12CR2-201ENST00000381800 ERBB3P21860 1342 aa20.38■□□□□ 0.85
LOH12CR2-201ENST00000381800 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
LOH12CR2-201ENST00000381800 N4BP2Q86UW6 1770 aaPredicted RBP20.38■□□□□ 0.85
LOH12CR2-201ENST00000381800 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
LOH12CR2-201ENST00000381800 STK31Q9BXU1 1019 aa20.37■□□□□ 0.85
LOH12CR2-201ENST00000381800 LMOD2Q6P5Q4 547 aa20.37■□□□□ 0.85
LOH12CR2-201ENST00000381800 MIS18AQ9NYP9 233 aa20.37■□□□□ 0.85
LOH12CR2-201ENST00000381800 PXDNLA1KZ92 1463 aa20.36■□□□□ 0.85
LOH12CR2-201ENST00000381800 CCT4P50991 539 aaKnown RBP20.36■□□□□ 0.85
LOH12CR2-201ENST00000381800 LRRC59Q96AG4 307 aaKnown RBP20.36■□□□□ 0.85
LOH12CR2-201ENST00000381800 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
LOH12CR2-201ENST00000381800 ERICH6Q7L0X2 663 aa20.35■□□□□ 0.85
LOH12CR2-201ENST00000381800 RPAP2Q8IXW5 612 aaPredicted RBP20.35■□□□□ 0.85
LOH12CR2-201ENST00000381800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.35■□□□□ 0.85
LOH12CR2-201ENST00000381800 ZBTB47Q9UFB7 747 aaPredicted RBP20.35■□□□□ 0.85
LOH12CR2-201ENST00000381800 RGPD5Q99666 1765 aa20.35■□□□□ 0.85
LOH12CR2-201ENST00000381800 AXIN2Q9Y2T1 843 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms