RNA–Protein interactions for RNA: ENST00000381227.5

POLR2B-202, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene POLR2B, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-202ENST00000381227 KCNA6P17658 529 aa8.15□□□□□ -1.11
POLR2B-202ENST00000381227 BMP2KLQ5H9B9 411 aa8.15□□□□□ -1.11
POLR2B-202ENST00000381227 FAM135BQ49AJ0 1406 aa8.15□□□□□ -1.11
POLR2B-202ENST00000381227 GNAT3A8MTJ3 354 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 CEP170BQ9Y4F5 1589 aaPredicted RBP8.14□□□□□ -1.11
POLR2B-202ENST00000381227 INTS3Q68E01 1043 aaKnown RBP8.14□□□□□ -1.11
POLR2B-202ENST00000381227 NOL8Q76FK4 1167 aaKnown RBP8.14□□□□□ -1.11
POLR2B-202ENST00000381227 RPAP2Q8IXW5 612 aaPredicted RBP8.14□□□□□ -1.11
POLR2B-202ENST00000381227 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 MEIS3Q99687 375 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 L1TD1Q5T7N2 865 aaKnown RBP8.14□□□□□ -1.11
POLR2B-202ENST00000381227 TBC1D9Q6ZT07 1266 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 ANKLE2Q86XL3 938 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 MED14O60244 1454 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 CD163L1Q9NR16 1453 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 LRRC7Q96NW7 1537 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 HDGFL1Q5TGJ6 251 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 ANP32BQ92688 251 aaKnown RBP8.14□□□□□ -1.11
POLR2B-202ENST00000381227 EYA1Q99502 592 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 EXOC6BQ9Y2D4 811 aa8.14□□□□□ -1.11
POLR2B-202ENST00000381227 TTC21AQ8NDW8 1320 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 AATKQ6ZMQ8 1374 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 PLEKHG3A1L390 1219 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 GNAI2P04899 355 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 CCT4P50991 539 aaKnown RBP8.13□□□□□ -1.11
POLR2B-202ENST00000381227 C1orf141Q5JVX7 400 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 USP19O94966 1318 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 NLRP1Q9C000 1473 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 GOLGA6L3A6NEY3 463 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 CSB-PGBD3P0DP91 1061 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 C16orf71Q8IYS4 520 aaPredicted RBP8.13□□□□□ -1.11
POLR2B-202ENST00000381227 SHPRHQ149N8 1683 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 MCCP23508 829 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 PHF8Q9UPP1 1060 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 TBX22Q9Y458 520 aa8.13□□□□□ -1.11
POLR2B-202ENST00000381227 CHL1O00533 1208 aa8.12□□□□□ -1.11
POLR2B-202ENST00000381227 ST18O60284 1047 aa8.12□□□□□ -1.11
POLR2B-202ENST00000381227 REC8O95072 547 aa8.12□□□□□ -1.11
POLR2B-202ENST00000381227 UBTFL1P0CB47 393 aaPredicted RBP8.12□□□□□ -1.11
POLR2B-202ENST00000381227 FLT4P35916 1363 aa8.12□□□□□ -1.11
POLR2B-202ENST00000381227 ARHGAP23Q9P227 1491 aa8.12□□□□□ -1.11
POLR2B-202ENST00000381227 DDX11L8A8MPP1 907 aa8.12□□□□□ -1.11
POLR2B-202ENST00000381227 GNAI3P08754 354 aa8.12□□□□□ -1.11
POLR2B-202ENST00000381227 PTPRCP08575 1304 aa8.12□□□□□ -1.11
POLR2B-202ENST00000381227 USP32Q8NFA0 1604 aa8.12□□□□□ -1.11
POLR2B-202ENST00000381227 CDK12Q9NYV4 1490 aaPredicted RBP8.12□□□□□ -1.11
POLR2B-202ENST00000381227 CPSF1Q10570 1443 aaKnown RBP8.11□□□□□ -1.11
POLR2B-202ENST00000381227 ZNF853P0CG23 659 aa8.11□□□□□ -1.11
POLR2B-202ENST00000381227 FLIIQ13045 1269 aa8.11□□□□□ -1.11
POLR2B-202ENST00000381227 FOXD4L5Q5VV16 416 aaPredicted RBP8.11□□□□□ -1.11
POLR2B-202ENST00000381227 G2E3Q7L622 706 aa8.11□□□□□ -1.11
POLR2B-202ENST00000381227 FOXD4L4Q8WXT5 416 aaPredicted RBP8.11□□□□□ -1.11
POLR2B-202ENST00000381227 SLIT1O75093 1534 aa8.11□□□□□ -1.11
POLR2B-202ENST00000381227 PLEKHG1Q9ULL1 1385 aa8.11□□□□□ -1.11
POLR2B-202ENST00000381227 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.11□□□□□ -1.11
POLR2B-202ENST00000381227 ABCC4O15439 1325 aa8.11□□□□□ -1.11
POLR2B-202ENST00000381227 MCM4P33991 863 aa8.11□□□□□ -1.11
POLR2B-202ENST00000381227 ZNF530Q6P9A1 599 aaPredicted RBP8.11□□□□□ -1.11
POLR2B-202ENST00000381227 ANKRD44Q8N8A2 993 aa8.11□□□□□ -1.11
POLR2B-202ENST00000381227 ANO2Q9NQ90 1003 aa8.11□□□□□ -1.11
POLR2B-202ENST00000381227 COL3A1P02461 1466 aaPredicted RBP8.11□□□□□ -1.11
POLR2B-202ENST00000381227 TRAK2O60296 914 aa8.1□□□□□ -1.11
POLR2B-202ENST00000381227 SURF6O75683 361 aaKnown RBP8.1□□□□□ -1.11
POLR2B-202ENST00000381227 TAF7Q15545 349 aaPredicted RBP8.1□□□□□ -1.11
POLR2B-202ENST00000381227 RBM42Q9BTD8 480 aaKnown RBP8.1□□□□□ -1.11
POLR2B-202ENST00000381227 CHMP4AQ9BY43 222 aa8.1□□□□□ -1.11
POLR2B-202ENST00000381227 MSH6P52701 1360 aa8.1□□□□□ -1.11
POLR2B-202ENST00000381227 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
POLR2B-202ENST00000381227 TSHZ3Q63HK5 1081 aa8.1□□□□□ -1.11
POLR2B-202ENST00000381227 CEP85Q6P2H3 762 aa8.1□□□□□ -1.11
POLR2B-202ENST00000381227 TRIM44Q96DX7 344 aaPredicted RBP8.1□□□□□ -1.11
POLR2B-202ENST00000381227 DCTPP1Q9H773 170 aa8.1□□□□□ -1.11
POLR2B-202ENST00000381227 C9orf78Q9NZ63 289 aaPredicted RBP8.1□□□□□ -1.11
POLR2B-202ENST00000381227 USP6P35125 1406 aa8.1□□□□□ -1.11
POLR2B-202ENST00000381227 OTUD7AQ8TE49 926 aaPredicted RBP8.1□□□□□ -1.11
POLR2B-202ENST00000381227 LRRCC1Q9C099 1032 aa8.1□□□□□ -1.11
POLR2B-202ENST00000381227 IL1RAPL2Q9NP60 686 aa8.1□□□□□ -1.11
POLR2B-202ENST00000381227 CPS1P31327 1500 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 DLC1Q96QB1 1528 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 HOXC9P31274 260 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 BRPF1P55201 1214 aaPredicted RBP8.09□□□□□ -1.11
POLR2B-202ENST00000381227 TTC22Q5TAA0 569 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 SBNO1A3KN83 1393 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 PIK3R4Q99570 1358 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 KCNJ4P48050 445 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 AIMP1Q12904 312 aaKnown RBP8.09□□□□□ -1.11
POLR2B-202ENST00000381227 KIAA1211Q6ZU35 1233 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 PROSER2Q86WR7 435 aaPredicted RBP8.09□□□□□ -1.11
POLR2B-202ENST00000381227 PLEKHM2Q8IWE5 1019 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 SIRT2Q8IXJ6 389 aa8.09□□□□□ -1.11
POLR2B-202ENST00000381227 RABEP1Q15276 862 aa8.09□□□□□ -1.12
POLR2B-202ENST00000381227 PLEKHO1Q53GL0 409 aaPredicted RBP8.09□□□□□ -1.12
POLR2B-202ENST00000381227 MPRIPQ6WCQ1 1025 aa8.09□□□□□ -1.12
POLR2B-202ENST00000381227 LRRFIP2Q9Y608 721 aaKnown RBP8.09□□□□□ -1.12
POLR2B-202ENST00000381227 SRCIN1Q9C0H9 1055 aa8.08□□□□□ -1.12
POLR2B-202ENST00000381227 NLRP2Q9NX02 1062 aa8.08□□□□□ -1.12
POLR2B-202ENST00000381227 BTBD11A6QL63 1104 aa8.08□□□□□ -1.12
POLR2B-202ENST00000381227 DDX49Q9Y6V7 483 aaKnown RBP8.08□□□□□ -1.12
POLR2B-202ENST00000381227 ANXA1P04083 346 aa8.08□□□□□ -1.12
POLR2B-202ENST00000381227 SDSP20132 328 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms