RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 BABAM1Q9NWV8 329 aa16.83■□□□□ 0.28
LCMT1-201ENST00000380962 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
LCMT1-201ENST00000380962 NWD1Q149M9 1564 aa16.83■□□□□ 0.28
LCMT1-201ENST00000380962 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
LCMT1-201ENST00000380962 INTS3Q68E01 1043 aaKnown RBP16.82■□□□□ 0.28
LCMT1-201ENST00000380962 RTF1Q92541 710 aaKnown RBP16.82■□□□□ 0.28
LCMT1-201ENST00000380962 EYA1Q99502 592 aa16.82■□□□□ 0.28
LCMT1-201ENST00000380962 PHRF1Q9P1Y6 1649 aaKnown RBP16.82■□□□□ 0.28
LCMT1-201ENST00000380962 LMTK3Q96Q04 1460 aa16.82■□□□□ 0.28
LCMT1-201ENST00000380962 HOXC9P31274 260 aa16.81■□□□□ 0.28
LCMT1-201ENST00000380962 DCTN1Q14203 1278 aa16.8■□□□□ 0.28
LCMT1-201ENST00000380962 MTHFSDQ2M296 383 aaKnown RBP16.8■□□□□ 0.28
LCMT1-201ENST00000380962 RTL5Q5HYW3 569 aaPredicted RBP16.8■□□□□ 0.28
LCMT1-201ENST00000380962 ABTB2Q8N961 1025 aa16.79■□□□□ 0.28
LCMT1-201ENST00000380962 TBC1D32Q96NH3 1257 aa16.79■□□□□ 0.28
LCMT1-201ENST00000380962 NFAT5O94916 1531 aa16.78■□□□□ 0.28
LCMT1-201ENST00000380962 BECN1Q14457 450 aa16.78■□□□□ 0.28
LCMT1-201ENST00000380962 MCM10Q7L590 875 aa16.78■□□□□ 0.28
LCMT1-201ENST00000380962 ELL2O00472 640 aaPredicted RBP16.77■□□□□ 0.28
LCMT1-201ENST00000380962 RGS12O14924 1447 aa16.77■□□□□ 0.28
LCMT1-201ENST00000380962 CHD1LQ86WJ1 897 aa16.77■□□□□ 0.28
LCMT1-201ENST00000380962 KCNH5Q8NCM2 988 aa16.77■□□□□ 0.28
LCMT1-201ENST00000380962 SOX12O15370 315 aa16.75■□□□□ 0.27
LCMT1-201ENST00000380962 EIF5BO60841 1220 aaKnown RBP16.75■□□□□ 0.27
LCMT1-201ENST00000380962 IP6K1Q92551 441 aa16.75■□□□□ 0.27
LCMT1-201ENST00000380962 MAP3K5Q99683 1374 aa16.75■□□□□ 0.27
LCMT1-201ENST00000380962 GNAT3A8MTJ3 354 aa16.75■□□□□ 0.27
LCMT1-201ENST00000380962 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
LCMT1-201ENST00000380962 MST1RQ04912 1400 aa16.74■□□□□ 0.27
LCMT1-201ENST00000380962 SEC24BO95487 1268 aa16.74■□□□□ 0.27
LCMT1-201ENST00000380962 BMP2KLQ5H9B9 411 aa16.74■□□□□ 0.27
LCMT1-201ENST00000380962 NBR1Q14596 966 aa16.73■□□□□ 0.27
LCMT1-201ENST00000380962 RPAP2Q8IXW5 612 aaPredicted RBP16.73■□□□□ 0.27
LCMT1-201ENST00000380962 SLIT3O75094 1523 aa16.73■□□□□ 0.27
LCMT1-201ENST00000380962 LTN1O94822 1766 aa16.73■□□□□ 0.27
LCMT1-201ENST00000380962 KIF1AQ12756 1690 aa16.72■□□□□ 0.27
LCMT1-201ENST00000380962 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
LCMT1-201ENST00000380962 CERKQ8TCT0 537 aa16.71■□□□□ 0.27
LCMT1-201ENST00000380962 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
LCMT1-201ENST00000380962 CACNA1FO60840 1977 aa16.71■□□□□ 0.27
LCMT1-201ENST00000380962 MSH6P52701 1360 aa16.71■□□□□ 0.27
LCMT1-201ENST00000380962 FOXO3O43524 673 aa16.7■□□□□ 0.26
LCMT1-201ENST00000380962 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
LCMT1-201ENST00000380962 HSPA2P54652 639 aa16.7■□□□□ 0.26
LCMT1-201ENST00000380962 PSME1Q06323 249 aa16.7■□□□□ 0.26
LCMT1-201ENST00000380962 SIRT2Q8IXJ6 389 aa16.7■□□□□ 0.26
LCMT1-201ENST00000380962 ANKRD44Q8N8A2 993 aa16.7■□□□□ 0.26
LCMT1-201ENST00000380962 ATP10DQ9P241 1426 aa16.7■□□□□ 0.26
LCMT1-201ENST00000380962 LNPKQ9C0E8 428 aa16.7■□□□□ 0.26
LCMT1-201ENST00000380962 DCTPP1Q9H773 170 aa16.7■□□□□ 0.26
LCMT1-201ENST00000380962 MED1Q15648 1581 aaPredicted RBP16.69■□□□□ 0.26
LCMT1-201ENST00000380962 NCOA3Q9Y6Q9 1424 aa16.69■□□□□ 0.26
LCMT1-201ENST00000380962 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
LCMT1-201ENST00000380962 CEMIPQ8WUJ3 1361 aa16.68■□□□□ 0.26
LCMT1-201ENST00000380962 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
LCMT1-201ENST00000380962 PXDNLA1KZ92 1463 aa16.68■□□□□ 0.26
LCMT1-201ENST00000380962 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
LCMT1-201ENST00000380962 TAF7Q15545 349 aaPredicted RBP16.68■□□□□ 0.26
LCMT1-201ENST00000380962 KRT24Q2M2I5 525 aa16.68■□□□□ 0.26
LCMT1-201ENST00000380962 ANKRD45Q5TZF3 282 aa16.68■□□□□ 0.26
LCMT1-201ENST00000380962 CCDC30Q5VVM6 783 aa16.68■□□□□ 0.26
LCMT1-201ENST00000380962 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
LCMT1-201ENST00000380962 FAM208AQ9UK61 1670 aaKnown RBP16.67■□□□□ 0.26
LCMT1-201ENST00000380962 NUTM2GQ5VZR2 741 aa16.67■□□□□ 0.26
LCMT1-201ENST00000380962 C22orf23Q9BZE7 217 aa16.67■□□□□ 0.26
LCMT1-201ENST00000380962 TRPM3Q9HCF6 1732 aaPredicted RBP16.67■□□□□ 0.26
LCMT1-201ENST00000380962 N4BP2Q86UW6 1770 aaPredicted RBP16.67■□□□□ 0.26
LCMT1-201ENST00000380962 HOXB7P09629 217 aa16.66■□□□□ 0.26
LCMT1-201ENST00000380962 C1orf115Q9H7X2 142 aa16.66■□□□□ 0.26
LCMT1-201ENST00000380962 CAMTA1Q9Y6Y1 1673 aa16.66■□□□□ 0.26
LCMT1-201ENST00000380962 DCCP43146 1447 aa16.66■□□□□ 0.26
LCMT1-201ENST00000380962 HMMRO75330 724 aa16.65■□□□□ 0.26
LCMT1-201ENST00000380962 CEP85Q6P2H3 762 aa16.65■□□□□ 0.26
LCMT1-201ENST00000380962 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
LCMT1-201ENST00000380962 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
LCMT1-201ENST00000380962 AMOTQ4VCS5 1084 aa16.65■□□□□ 0.26
LCMT1-201ENST00000380962 IL17REQ8NFR9 667 aa16.65■□□□□ 0.26
LCMT1-201ENST00000380962 PLEKHG2Q9H7P9 1386 aa16.64■□□□□ 0.26
LCMT1-201ENST00000380962 LMO7Q8WWI1 1683 aa16.64■□□□□ 0.25
LCMT1-201ENST00000380962 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
LCMT1-201ENST00000380962 ARHGEF25Q86VW2 580 aa16.64■□□□□ 0.25
LCMT1-201ENST00000380962 C1orf167Q5SNV9 1468 aa16.64■□□□□ 0.25
LCMT1-201ENST00000380962 DEKP35659 375 aaKnown RBP16.62■□□□□ 0.25
LCMT1-201ENST00000380962 NFKBIBQ15653 356 aa16.62■□□□□ 0.25
LCMT1-201ENST00000380962 C19orf44Q9H6X5 657 aa16.62■□□□□ 0.25
LCMT1-201ENST00000380962 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
LCMT1-201ENST00000380962 SOCS7O14512 581 aa16.61■□□□□ 0.25
LCMT1-201ENST00000380962 GCP02774 474 aa16.61■□□□□ 0.25
LCMT1-201ENST00000380962 MFAP1P55081 439 aaKnown RBP16.61■□□□□ 0.25
LCMT1-201ENST00000380962 PLEKHO1Q53GL0 409 aaPredicted RBP16.61■□□□□ 0.25
LCMT1-201ENST00000380962 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
LCMT1-201ENST00000380962 NBPF6Q5VWK0 638 aa16.61■□□□□ 0.25
LCMT1-201ENST00000380962 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
LCMT1-201ENST00000380962 NBPF4Q96M43 638 aa16.61■□□□□ 0.25
LCMT1-201ENST00000380962 KDM3BQ7LBC6 1761 aa16.61■□□□□ 0.25
LCMT1-201ENST00000380962 GNAI3P08754 354 aa16.6■□□□□ 0.25
LCMT1-201ENST00000380962 FLIIQ13045 1269 aa16.6■□□□□ 0.25
LCMT1-201ENST00000380962 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
LCMT1-201ENST00000380962 ABCC6O95255 1503 aa16.6■□□□□ 0.25
LCMT1-201ENST00000380962 MEIS3Q99687 375 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms