RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 NEK4P51957 841 aa13.47□□□□□ -0.25
DNMT3A-203ENST00000380746 TRIM44Q96DX7 344 aaPredicted RBP13.47□□□□□ -0.25
DNMT3A-203ENST00000380746 GBP4Q96PP9 640 aa13.47□□□□□ -0.25
DNMT3A-203ENST00000380746 NEXMIFQ5QGS0 1516 aa13.47□□□□□ -0.25
DNMT3A-203ENST00000380746 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
DNMT3A-203ENST00000380746 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
DNMT3A-203ENST00000380746 GLIPR1L2Q4G1C9 344 aa13.47□□□□□ -0.25
DNMT3A-203ENST00000380746 SDSP20132 328 aa13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 FLIIQ13045 1269 aa13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 DEPDC5O75140 1603 aa13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 GNAI2P04899 355 aa13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 PLEKHM2Q8IWE5 1019 aa13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 GAS2L2Q8NHY3 880 aa13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 TNPO1Q92973 898 aaKnown RBP13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 NLRP2Q9NX02 1062 aa13.46□□□□□ -0.25
DNMT3A-203ENST00000380746 DIP2CQ9Y2E4 1556 aa13.46□□□□□ -0.26
DNMT3A-203ENST00000380746 PTPRMP28827 1452 aa13.46□□□□□ -0.26
DNMT3A-203ENST00000380746 BMP2KLQ5H9B9 411 aa13.46□□□□□ -0.26
DNMT3A-203ENST00000380746 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.26
DNMT3A-203ENST00000380746 NAP1L5Q96NT1 182 aaPredicted RBP13.46□□□□□ -0.26
DNMT3A-203ENST00000380746 SIL1Q9H173 461 aa13.46□□□□□ -0.26
DNMT3A-203ENST00000380746 CHMP3Q9Y3E7 222 aa13.46□□□□□ -0.26
DNMT3A-203ENST00000380746 NRXN1Q9ULB1 1477 aa13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 DDX17Q92841 729 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 C9orf78Q9NZ63 289 aaPredicted RBP13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 MSH6P52701 1360 aa13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 GSPT1P15170 499 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 CEP85Q6P2H3 762 aa13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 MPNDQ8N594 471 aa13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 MYL6BP14649 208 aa13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
DNMT3A-203ENST00000380746 KCNQ3O43525 872 aa13.44□□□□□ -0.26
DNMT3A-203ENST00000380746 ANP32BQ92688 251 aaKnown RBP13.44□□□□□ -0.26
DNMT3A-203ENST00000380746 K7ELQ4 463 aaPredicted RBP13.44□□□□□ -0.26
DNMT3A-203ENST00000380746 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
DNMT3A-203ENST00000380746 ZMYND15Q9H091 742 aa13.44□□□□□ -0.26
DNMT3A-203ENST00000380746 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
DNMT3A-203ENST00000380746 ALKQ9UM73 1620 aa13.44□□□□□ -0.26
DNMT3A-203ENST00000380746 A2ML1A8K2U0 1454 aa13.44□□□□□ -0.26
DNMT3A-203ENST00000380746 SRGAP3O43295 1099 aa13.43□□□□□ -0.26
DNMT3A-203ENST00000380746 TAF7Q15545 349 aaPredicted RBP13.43□□□□□ -0.26
DNMT3A-203ENST00000380746 PIK3C2BO00750 1634 aa13.43□□□□□ -0.26
DNMT3A-203ENST00000380746 L1TD1Q5T7N2 865 aaKnown RBP13.43□□□□□ -0.26
DNMT3A-203ENST00000380746 PHF8Q9UPP1 1060 aa13.43□□□□□ -0.26
DNMT3A-203ENST00000380746 CHL1O00533 1208 aa13.43□□□□□ -0.26
DNMT3A-203ENST00000380746 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
DNMT3A-203ENST00000380746 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
DNMT3A-203ENST00000380746 PNMA6EA0A0J9YXQ4 647 aa13.42□□□□□ -0.26
DNMT3A-203ENST00000380746 ST18O60284 1047 aa13.42□□□□□ -0.26
DNMT3A-203ENST00000380746 ORAI2Q96SN7 254 aa13.42□□□□□ -0.26
DNMT3A-203ENST00000380746 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
DNMT3A-203ENST00000380746 CABLES1Q8TDN4 633 aa13.42□□□□□ -0.26
DNMT3A-203ENST00000380746 NAP1L2Q9ULW6 460 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-203ENST00000380746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.42□□□□□ -0.26
DNMT3A-203ENST00000380746 TTC22Q5TAA0 569 aa13.42□□□□□ -0.26
DNMT3A-203ENST00000380746 SLC39A6Q13433 755 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 ZGPATQ8N5A5 531 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 ANKRD44Q8N8A2 993 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 LRRCC1Q9C099 1032 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 PI4KAP2A4QPH2 592 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 PRPF40AO75400 957 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 CAVIN1Q6NZI2 390 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 PI4KAP1Q8N8J0 262 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 ARHGAP45Q92619 1136 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 IQSEC2Q5JU85 1478 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 BTBD11A6QL63 1104 aa13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
DNMT3A-203ENST00000380746 RNF214Q8ND24 703 aa13.4□□□□□ -0.26
DNMT3A-203ENST00000380746 CHPF2Q9P2E5 772 aa13.4□□□□□ -0.26
DNMT3A-203ENST00000380746 CD163L1Q9NR16 1453 aa13.4□□□□□ -0.26
DNMT3A-203ENST00000380746 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
DNMT3A-203ENST00000380746 PKP1Q13835 747 aa13.4□□□□□ -0.26
DNMT3A-203ENST00000380746 CHRNA2Q15822 529 aa13.4□□□□□ -0.26
DNMT3A-203ENST00000380746 SIGLEC1Q9BZZ2 1709 aa13.4□□□□□ -0.26
DNMT3A-203ENST00000380746 DDX11L8A8MPP1 907 aa13.4□□□□□ -0.27
DNMT3A-203ENST00000380746 REC8O95072 547 aa13.4□□□□□ -0.27
DNMT3A-203ENST00000380746 HOXC9P31274 260 aa13.4□□□□□ -0.27
DNMT3A-203ENST00000380746 KIAA1211Q6ZU35 1233 aa13.4□□□□□ -0.27
DNMT3A-203ENST00000380746 IL17REQ8NFR9 667 aa13.4□□□□□ -0.27
DNMT3A-203ENST00000380746 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.27
DNMT3A-203ENST00000380746 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 SETBP1Q9Y6X0 1596 aa13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 ARHGAP31Q2M1Z3 1444 aa13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 GDPD2Q9HCC8 539 aa13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 ARHGEF40Q8TER5 1519 aa13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 MCCP23508 829 aa13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 CCT4P50991 539 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 ANTXR1Q9H6X2 564 aa13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 CPS1P31327 1500 aa13.39□□□□□ -0.27
DNMT3A-203ENST00000380746 NBPF6Q5VWK0 638 aa13.38□□□□□ -0.27
DNMT3A-203ENST00000380746 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms