RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 TSPYL1Q9H0U9 437 aa13.21□□□□□ -0.3
ITSN1-201ENST00000379960 YTHDC2Q9H6S0 1430 aaKnown RBP13.2□□□□□ -0.3
ITSN1-201ENST00000379960 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
ITSN1-201ENST00000379960 FAM193AP78312 1265 aa13.2□□□□□ -0.3
ITSN1-201ENST00000379960 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
ITSN1-201ENST00000379960 MYOM1P52179 1685 aa13.2□□□□□ -0.3
ITSN1-201ENST00000379960 RIMS1Q86UR5 1692 aaKnown RBP13.2□□□□□ -0.3
ITSN1-201ENST00000379960 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
ITSN1-201ENST00000379960 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
ITSN1-201ENST00000379960 METP08581 1390 aa13.19□□□□□ -0.3
ITSN1-201ENST00000379960 UBR1Q8IWV7 1749 aa13.19□□□□□ -0.3
ITSN1-201ENST00000379960 SYCE3A1L190 88 aa13.19□□□□□ -0.3
ITSN1-201ENST00000379960 SNX21Q969T3 373 aa13.19□□□□□ -0.3
ITSN1-201ENST00000379960 PTPRMP28827 1452 aa13.19□□□□□ -0.3
ITSN1-201ENST00000379960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.3
ITSN1-201ENST00000379960 CARD14Q9BXL6 1004 aa13.18□□□□□ -0.3
ITSN1-201ENST00000379960 FKBP5Q13451 457 aaPredicted RBP13.18□□□□□ -0.3
ITSN1-201ENST00000379960 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
ITSN1-201ENST00000379960 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
ITSN1-201ENST00000379960 TMEM2Q9UHN6 1383 aa13.18□□□□□ -0.3
ITSN1-201ENST00000379960 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
ITSN1-201ENST00000379960 CD2BP2O95400 341 aaKnown RBP13.17□□□□□ -0.3
ITSN1-201ENST00000379960 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
ITSN1-201ENST00000379960 EVC2Q86UK5 1308 aa13.17□□□□□ -0.3
ITSN1-201ENST00000379960 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
ITSN1-201ENST00000379960 PMFBP1Q8TBY8 1022 aa13.17□□□□□ -0.3
ITSN1-201ENST00000379960 RSPH14Q9UHP6 348 aa13.17□□□□□ -0.3
ITSN1-201ENST00000379960 CHAF1AQ13111 956 aaPredicted RBP13.16□□□□□ -0.3
ITSN1-201ENST00000379960 LRSAM1Q6UWE0 723 aa13.16□□□□□ -0.3
ITSN1-201ENST00000379960 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.16□□□□□ -0.3
ITSN1-201ENST00000379960 EFCC1Q9HA90 598 aa13.16□□□□□ -0.3
ITSN1-201ENST00000379960 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
ITSN1-201ENST00000379960 SLFN5Q08AF3 891 aa13.16□□□□□ -0.3
ITSN1-201ENST00000379960 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
ITSN1-201ENST00000379960 ZNF622Q969S3 477 aaKnown RBP eCLIP13.16□□□□□ -0.3
ITSN1-201ENST00000379960 DDX41Q9UJV9 622 aaKnown RBP13.16□□□□□ -0.3
ITSN1-201ENST00000379960 TULP4Q9NRJ4 1543 aa13.15□□□□□ -0.3
ITSN1-201ENST00000379960 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
ITSN1-201ENST00000379960 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
ITSN1-201ENST00000379960 NCBP1Q09161 790 aaKnown RBP13.15□□□□□ -0.3
ITSN1-201ENST00000379960 GAS2L2Q8NHY3 880 aa13.15□□□□□ -0.3
ITSN1-201ENST00000379960 NRXN3Q9Y4C0 1643 aa13.15□□□□□ -0.31
ITSN1-201ENST00000379960 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
ITSN1-201ENST00000379960 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
ITSN1-201ENST00000379960 EID1Q9Y6B2 187 aa13.14□□□□□ -0.31
ITSN1-201ENST00000379960 GTF2A1P52655 376 aaPredicted RBP13.14□□□□□ -0.31
ITSN1-201ENST00000379960 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
ITSN1-201ENST00000379960 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
ITSN1-201ENST00000379960 GPT2Q8TD30 523 aa13.14□□□□□ -0.31
ITSN1-201ENST00000379960 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
ITSN1-201ENST00000379960 SIRT1Q96EB6 747 aa13.13□□□□□ -0.31
ITSN1-201ENST00000379960 CDK19Q9BWU1 502 aa13.13□□□□□ -0.31
ITSN1-201ENST00000379960 TMEM63CQ9P1W3 806 aa13.13□□□□□ -0.31
ITSN1-201ENST00000379960 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
ITSN1-201ENST00000379960 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
ITSN1-201ENST00000379960 SBNO2Q9Y2G9 1366 aa13.13□□□□□ -0.31
ITSN1-201ENST00000379960 K7ELQ4 463 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-201ENST00000379960 CTIFO43310 598 aaKnown RBP13.13□□□□□ -0.31
ITSN1-201ENST00000379960 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
ITSN1-201ENST00000379960 HNRNPH2P55795 449 aaKnown RBP13.13□□□□□ -0.31
ITSN1-201ENST00000379960 INSRP06213 1382 aa13.12□□□□□ -0.31
ITSN1-201ENST00000379960 NSD3Q9BZ95 1437 aa13.12□□□□□ -0.31
ITSN1-201ENST00000379960 KRT222Q8N1A0 295 aa13.12□□□□□ -0.31
ITSN1-201ENST00000379960 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
ITSN1-201ENST00000379960 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-201ENST00000379960 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
ITSN1-201ENST00000379960 SETD1AO15047 1707 aaKnown RBP13.12□□□□□ -0.31
ITSN1-201ENST00000379960 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
ITSN1-201ENST00000379960 RBM33Q96EV2 1170 aaKnown RBP13.11□□□□□ -0.31
ITSN1-201ENST00000379960 PPP2R1AP30153 589 aa13.11□□□□□ -0.31
ITSN1-201ENST00000379960 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-201ENST00000379960 THEMISQ8N1K5 641 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-201ENST00000379960 BANK1Q8NDB2 785 aa13.11□□□□□ -0.31
ITSN1-201ENST00000379960 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
ITSN1-201ENST00000379960 NKTRP30414 1462 aaKnown RBP13.11□□□□□ -0.31
ITSN1-201ENST00000379960 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
ITSN1-201ENST00000379960 ST7Q9NRC1 585 aa13.1□□□□□ -0.31
ITSN1-201ENST00000379960 NOP2P46087 812 aaKnown RBP13.1□□□□□ -0.31
ITSN1-201ENST00000379960 NAA30Q147X3 362 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-201ENST00000379960 CABP1Q9NZU7 370 aa13.1□□□□□ -0.31
ITSN1-201ENST00000379960 DHX16O60231 1041 aaKnown RBP13.1□□□□□ -0.31
ITSN1-201ENST00000379960 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-201ENST00000379960 NSFL1CQ9UNZ2 370 aaKnown RBP13.1□□□□□ -0.31
ITSN1-201ENST00000379960 PKP1Q13835 747 aa13.09□□□□□ -0.31
ITSN1-201ENST00000379960 CT47A1Q5JQC4 288 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-201ENST00000379960 CHAMP1Q96JM3 812 aa13.09□□□□□ -0.31
ITSN1-201ENST00000379960 MYCBPQ99417 103 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-201ENST00000379960 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
ITSN1-201ENST00000379960 TOMM22Q9NS69 142 aa13.08□□□□□ -0.32
ITSN1-201ENST00000379960 USP25Q9UHP3 1055 aa13.08□□□□□ -0.32
ITSN1-201ENST00000379960 TNNQ9UQP3 1299 aa13.08□□□□□ -0.32
ITSN1-201ENST00000379960 ADAMTS13Q76LX8 1427 aa13.08□□□□□ -0.32
ITSN1-201ENST00000379960 GYS2P54840 703 aa13.08□□□□□ -0.32
ITSN1-201ENST00000379960 RASSF4Q9H2L5 321 aa13.08□□□□□ -0.32
ITSN1-201ENST00000379960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.07□□□□□ -0.32
ITSN1-201ENST00000379960 GPATCH11Q8N954 259 aa13.07□□□□□ -0.32
ITSN1-201ENST00000379960 KIF2CQ99661 725 aa13.07□□□□□ -0.32
ITSN1-201ENST00000379960 GGNBP2Q9H3C7 697 aa13.07□□□□□ -0.32
ITSN1-201ENST00000379960 MORC1Q86VD1 984 aa13.07□□□□□ -0.32
ITSN1-201ENST00000379960 TSPY26PQ9H489 355 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms