RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 NSFL1CQ9UNZ2 370 aaKnown RBP11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 CPSF1Q10570 1443 aaKnown RBP11.55□□□□□ -0.56
NHLRC3-202ENST00000379600 PRIM1P49642 420 aaKnown RBP11.55□□□□□ -0.56
NHLRC3-202ENST00000379600 ANKRD44Q8N8A2 993 aa11.55□□□□□ -0.56
NHLRC3-202ENST00000379600 API5Q9BZZ5 524 aaKnown RBP11.55□□□□□ -0.56
NHLRC3-202ENST00000379600 WAPLQ7Z5K2 1190 aa11.55□□□□□ -0.56
NHLRC3-202ENST00000379600 NME9Q86XW9 330 aa11.55□□□□□ -0.56
NHLRC3-202ENST00000379600 CPS1P31327 1500 aa11.55□□□□□ -0.56
NHLRC3-202ENST00000379600 CALD1Q05682 793 aaKnown RBP11.55□□□□□ -0.56
NHLRC3-202ENST00000379600 CEP85Q6P2H3 762 aa11.55□□□□□ -0.56
NHLRC3-202ENST00000379600 NUCB2P80303 420 aa11.54□□□□□ -0.56
NHLRC3-202ENST00000379600 MSH6P52701 1360 aa11.54□□□□□ -0.56
NHLRC3-202ENST00000379600 GLIPR1L2Q4G1C9 344 aa11.53□□□□□ -0.56
NHLRC3-202ENST00000379600 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
NHLRC3-202ENST00000379600 DLC1Q96QB1 1528 aa11.53□□□□□ -0.56
NHLRC3-202ENST00000379600 PRPF40AO75400 957 aaKnown RBP11.53□□□□□ -0.56
NHLRC3-202ENST00000379600 FBXO31Q5XUX0 539 aaPredicted RBP11.53□□□□□ -0.56
NHLRC3-202ENST00000379600 MON2Q7Z3U7 1717 aa11.53□□□□□ -0.56
NHLRC3-202ENST00000379600 PKNOX2Q96KN3 472 aa11.53□□□□□ -0.56
NHLRC3-202ENST00000379600 TMEM63CQ9P1W3 806 aa11.53□□□□□ -0.56
NHLRC3-202ENST00000379600 NRKQ7Z2Y5 1582 aa11.52□□□□□ -0.56
NHLRC3-202ENST00000379600 NCLP19338 710 aaKnown RBP11.52□□□□□ -0.56
NHLRC3-202ENST00000379600 NOL7Q9UMY1 257 aaKnown RBP11.52□□□□□ -0.56
NHLRC3-202ENST00000379600 EDC4Q6P2E9 1401 aaKnown RBP11.52□□□□□ -0.57
NHLRC3-202ENST00000379600 AATKQ6ZMQ8 1374 aa11.52□□□□□ -0.57
NHLRC3-202ENST00000379600 RRS1Q15050 365 aaKnown RBP11.52□□□□□ -0.57
NHLRC3-202ENST00000379600 C3P01024 1663 aa11.51□□□□□ -0.57
NHLRC3-202ENST00000379600 HS1BP3Q53T59 392 aa11.51□□□□□ -0.57
NHLRC3-202ENST00000379600 MEIS3Q99687 375 aa11.51□□□□□ -0.57
NHLRC3-202ENST00000379600 NEO1Q92859 1461 aa11.51□□□□□ -0.57
NHLRC3-202ENST00000379600 NCKAP5LQ9HCH0 1330 aa11.51□□□□□ -0.57
NHLRC3-202ENST00000379600 APBB1O00213 710 aa11.51□□□□□ -0.57
NHLRC3-202ENST00000379600 CWC22Q9HCG8 908 aaKnown RBP11.51□□□□□ -0.57
NHLRC3-202ENST00000379600 ZNF500O60304 480 aaPredicted RBP11.51□□□□□ -0.57
NHLRC3-202ENST00000379600 AEBP1Q8IUX7 1158 aa11.5□□□□□ -0.57
NHLRC3-202ENST00000379600 PDCL3Q9H2J4 239 aa11.5□□□□□ -0.57
NHLRC3-202ENST00000379600 AKAP12Q02952 1782 aa11.5□□□□□ -0.57
NHLRC3-202ENST00000379600 MSNP26038 577 aaKnown RBP11.5□□□□□ -0.57
NHLRC3-202ENST00000379600 NRXN3Q9Y4C0 1643 aa11.5□□□□□ -0.57
NHLRC3-202ENST00000379600 XPCQ01831 940 aaPredicted RBP11.49□□□□□ -0.57
NHLRC3-202ENST00000379600 RPAP2Q8IXW5 612 aaPredicted RBP11.49□□□□□ -0.57
NHLRC3-202ENST00000379600 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
NHLRC3-202ENST00000379600 SYCE3A1L190 88 aa11.49□□□□□ -0.57
NHLRC3-202ENST00000379600 TERF1P54274 439 aa11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 LMOD3Q0VAK6 560 aa11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 LRSAM1Q6UWE0 723 aa11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 ANP32BQ92688 251 aaKnown RBP11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 CHL1O00533 1208 aa11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 ST18O60284 1047 aa11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 RBM10P98175 930 aaKnown RBP11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 RGPD1P0DJD0 1748 aa11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 PEAK1Q9H792 1746 aa11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 FOXD4L5Q5VV16 416 aaPredicted RBP11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 FOXD4L4Q8WXT5 416 aaPredicted RBP11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 R3HCC1Q9Y3T6 440 aaKnown RBP11.48□□□□□ -0.57
NHLRC3-202ENST00000379600 MCM10Q7L590 875 aa11.47□□□□□ -0.57
NHLRC3-202ENST00000379600 ZKSCAN5Q9Y2L8 839 aa11.47□□□□□ -0.57
NHLRC3-202ENST00000379600 SALL3Q9BXA9 1300 aa11.47□□□□□ -0.57
NHLRC3-202ENST00000379600 ERC2O15083 957 aa11.47□□□□□ -0.57
NHLRC3-202ENST00000379600 TSHZ3Q63HK5 1081 aa11.47□□□□□ -0.57
NHLRC3-202ENST00000379600 TMX3Q96JJ7 454 aa11.47□□□□□ -0.57
NHLRC3-202ENST00000379600 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
NHLRC3-202ENST00000379600 PALD1Q9ULE6 856 aa11.47□□□□□ -0.57
NHLRC3-202ENST00000379600 A2ML1A8K2U0 1454 aa11.46□□□□□ -0.57
NHLRC3-202ENST00000379600 ITSN1Q15811 1721 aa11.46□□□□□ -0.57
NHLRC3-202ENST00000379600 KIAA0232Q92628 1395 aa11.46□□□□□ -0.57
NHLRC3-202ENST00000379600 CRB1P82279 1406 aa11.46□□□□□ -0.57
NHLRC3-202ENST00000379600 RIMS1Q86UR5 1692 aaKnown RBP11.46□□□□□ -0.58
NHLRC3-202ENST00000379600 REC8O95072 547 aa11.46□□□□□ -0.58
NHLRC3-202ENST00000379600 BRD1O95696 1058 aa11.46□□□□□ -0.58
NHLRC3-202ENST00000379600 PDE1AP54750 535 aa11.46□□□□□ -0.58
NHLRC3-202ENST00000379600 WASLO00401 505 aaPredicted RBP11.46□□□□□ -0.58
NHLRC3-202ENST00000379600 EIF4A2Q14240 407 aaKnown RBP11.45□□□□□ -0.58
NHLRC3-202ENST00000379600 G2E3Q7L622 706 aa11.45□□□□□ -0.58
NHLRC3-202ENST00000379600 PTPRCP08575 1304 aa11.45□□□□□ -0.58
NHLRC3-202ENST00000379600 NPM1P06748 294 aaKnown RBP eCLIP11.45□□□□□ -0.58
NHLRC3-202ENST00000379600 CUL4AQ13619 759 aa11.45□□□□□ -0.58
NHLRC3-202ENST00000379600 NEK4P51957 841 aa11.44□□□□□ -0.58
NHLRC3-202ENST00000379600 CASC1Q6TDU7 716 aa11.44□□□□□ -0.58
NHLRC3-202ENST00000379600 TCHHQ07283 1943 aa11.44□□□□□ -0.58
NHLRC3-202ENST00000379600 SULT6B1Q6IMI4 303 aa11.44□□□□□ -0.58
NHLRC3-202ENST00000379600 METP08581 1390 aa11.44□□□□□ -0.58
NHLRC3-202ENST00000379600 F6X3S4 739 aa11.44□□□□□ -0.58
NHLRC3-202ENST00000379600 RNF214Q8ND24 703 aa11.44□□□□□ -0.58
NHLRC3-202ENST00000379600 COG3Q96JB2 828 aa11.44□□□□□ -0.58
NHLRC3-202ENST00000379600 ESYT1Q9BSJ8 1104 aa11.43□□□□□ -0.58
NHLRC3-202ENST00000379600 MIS18AQ9NYP9 233 aa11.43□□□□□ -0.58
NHLRC3-202ENST00000379600 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
NHLRC3-202ENST00000379600 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
NHLRC3-202ENST00000379600 NUDT16Q96DE0 195 aaKnown RBP11.43□□□□□ -0.58
NHLRC3-202ENST00000379600 IL25Q9H293 177 aa11.43□□□□□ -0.58
NHLRC3-202ENST00000379600 PRR36Q9H6K5 1346 aa11.43□□□□□ -0.58
NHLRC3-202ENST00000379600 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
NHLRC3-202ENST00000379600 UQCRHP07919 91 aa11.43□□□□□ -0.58
NHLRC3-202ENST00000379600 NALCNQ8IZF0 1738 aa11.42□□□□□ -0.58
NHLRC3-202ENST00000379600 GADD45BO75293 160 aaPredicted RBP11.42□□□□□ -0.58
NHLRC3-202ENST00000379600 EXOC6BQ9Y2D4 811 aa11.42□□□□□ -0.58
NHLRC3-202ENST00000379600 FAM13BQ9NYF5 915 aa11.42□□□□□ -0.58
NHLRC3-202ENST00000379600 IL17RAQ96F46 866 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms