RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 SYT10Q6XYQ8 523 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 CALRP27797 417 aaKnown RBP12.95□□□□□ -0.34
USP6NL-202ENST00000379237 CASQ1P31415 396 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 SMC2O95347 1197 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 FAM193AP78312 1265 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 FERMT3Q86UX7 667 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 KIF2CQ99661 725 aa12.95□□□□□ -0.34
USP6NL-202ENST00000379237 TDO2P48775 406 aa12.94□□□□□ -0.34
USP6NL-202ENST00000379237 ZNF165P49910 485 aa12.94□□□□□ -0.34
USP6NL-202ENST00000379237 KRT85P78386 507 aa12.94□□□□□ -0.34
USP6NL-202ENST00000379237 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP6NL-202ENST00000379237 C16orf71Q8IYS4 520 aaPredicted RBP12.94□□□□□ -0.34
USP6NL-202ENST00000379237 KIF14Q15058 1648 aa12.94□□□□□ -0.34
USP6NL-202ENST00000379237 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
USP6NL-202ENST00000379237 SDSP20132 328 aa12.94□□□□□ -0.34
USP6NL-202ENST00000379237 ANO6Q4KMQ2 910 aa12.94□□□□□ -0.34
USP6NL-202ENST00000379237 FBXO38Q6PIJ6 1188 aa12.94□□□□□ -0.34
USP6NL-202ENST00000379237 NCOA3Q9Y6Q9 1424 aa12.94□□□□□ -0.34
USP6NL-202ENST00000379237 DNAAF4Q8WXU2 420 aa12.93□□□□□ -0.34
USP6NL-202ENST00000379237 BRD1O95696 1058 aa12.93□□□□□ -0.34
USP6NL-202ENST00000379237 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
USP6NL-202ENST00000379237 SYCP1Q15431 976 aa12.93□□□□□ -0.34
USP6NL-202ENST00000379237 ERCC6LQ2NKX8 1250 aa12.93□□□□□ -0.34
USP6NL-202ENST00000379237 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
USP6NL-202ENST00000379237 ICE2Q659A1 982 aa12.93□□□□□ -0.34
USP6NL-202ENST00000379237 CAPN2P17655 700 aa12.93□□□□□ -0.34
USP6NL-202ENST00000379237 CCDC91Q7Z6B0 441 aa12.93□□□□□ -0.34
USP6NL-202ENST00000379237 ANKRD36BQ8N2N9 1353 aa12.93□□□□□ -0.34
USP6NL-202ENST00000379237 MYO1CO00159 1063 aa12.92□□□□□ -0.34
USP6NL-202ENST00000379237 STX6O43752 255 aa12.92□□□□□ -0.34
USP6NL-202ENST00000379237 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
USP6NL-202ENST00000379237 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
USP6NL-202ENST00000379237 IBSPP21815 317 aaPredicted RBP12.92□□□□□ -0.34
USP6NL-202ENST00000379237 OS9Q13438 667 aaPredicted RBP12.92□□□□□ -0.34
USP6NL-202ENST00000379237 CCDC102AQ96A19 550 aa12.92□□□□□ -0.34
USP6NL-202ENST00000379237 CTIFO43310 598 aaKnown RBP12.92□□□□□ -0.34
USP6NL-202ENST00000379237 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
USP6NL-202ENST00000379237 USP8P40818 1118 aa12.92□□□□□ -0.34
USP6NL-202ENST00000379237 UGGT2Q9NYU1 1516 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
USP6NL-202ENST00000379237 H3BQV1 296 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 NEMFO60524 1076 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 IFFO2Q5TF58 517 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 GIMAP7Q8NHV1 300 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 TYRO3Q06418 890 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 HSP90AB3PQ58FF7 597 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
USP6NL-202ENST00000379237 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 UHRF1BP1Q6BDS2 1440 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 IVLP07476 585 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 ZSCAN22P10073 491 aaPredicted RBP12.91□□□□□ -0.34
USP6NL-202ENST00000379237 SLC20A2Q08357 652 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 E2F4Q16254 413 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 NRBP1Q9UHY1 535 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 TRAK1Q9UPV9 953 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 JRKLQ9Y4A0 524 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
USP6NL-202ENST00000379237 SYTL4Q96C24 671 aaPredicted RBP12.91□□□□□ -0.34
USP6NL-202ENST00000379237 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
USP6NL-202ENST00000379237 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.34
USP6NL-202ENST00000379237 TRIM66O15016 1216 aa12.9□□□□□ -0.34
USP6NL-202ENST00000379237 CEBPZQ03701 1054 aaKnown RBP12.9□□□□□ -0.34
USP6NL-202ENST00000379237 DNM1Q05193 864 aaKnown RBP12.9□□□□□ -0.34
USP6NL-202ENST00000379237 ZDHHC9Q9Y397 364 aa12.9□□□□□ -0.34
USP6NL-202ENST00000379237 PIK3C2GO75747 1445 aa12.9□□□□□ -0.34
USP6NL-202ENST00000379237 DHX16O60231 1041 aaKnown RBP12.9□□□□□ -0.34
USP6NL-202ENST00000379237 OAS2P29728 719 aaKnown RBP12.9□□□□□ -0.34
USP6NL-202ENST00000379237 TMPOP42166 694 aaKnown RBP12.9□□□□□ -0.34
USP6NL-202ENST00000379237 CT47A1Q5JQC4 288 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-202ENST00000379237 PLEKHM2Q8IWE5 1019 aa12.9□□□□□ -0.34
USP6NL-202ENST00000379237 SPATA32Q96LK8 384 aa12.9□□□□□ -0.34
USP6NL-202ENST00000379237 TPM1P09493 284 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 LARP1BQ659C4 914 aaKnown RBP12.89□□□□□ -0.35
USP6NL-202ENST00000379237 MICALL1Q8N3F8 863 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 ZNF622Q969S3 477 aaKnown RBP eCLIP12.89□□□□□ -0.35
USP6NL-202ENST00000379237 PZPP20742 1482 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 EIF3JO75822 258 aaKnown RBP12.89□□□□□ -0.35
USP6NL-202ENST00000379237 CCDC83Q8IWF9 413 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 CNPY4Q8N129 248 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 DNAJC25Q9H1X3 360 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 ARFGAP3Q9NP61 516 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 DNAI1Q9UI46 699 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 COL17A1Q9UMD9 1497 aaPredicted RBP12.89□□□□□ -0.35
USP6NL-202ENST00000379237 CDK13Q14004 1512 aaKnown RBP12.89□□□□□ -0.35
USP6NL-202ENST00000379237 C14orf37Q86TY3 774 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 ANKRD20A12PQ8NF67 263 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 SLC12A5Q9H2X9 1139 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 ACBD3Q9H3P7 528 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 CCDC69A6NI79 296 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 SFPQP23246 707 aaKnown RBP eCLIP12.89□□□□□ -0.35
USP6NL-202ENST00000379237 SART3Q15020 963 aaKnown RBP12.89□□□□□ -0.35
USP6NL-202ENST00000379237 CCDC73Q6ZRK6 1079 aa12.89□□□□□ -0.35
USP6NL-202ENST00000379237 RRP15Q9Y3B9 282 aaKnown RBP12.89□□□□□ -0.35
USP6NL-202ENST00000379237 GYS2P54840 703 aa12.88□□□□□ -0.35
USP6NL-202ENST00000379237 KCNF1Q9H3M0 494 aa12.88□□□□□ -0.35
USP6NL-202ENST00000379237 CYP2C19P33261 490 aa12.88□□□□□ -0.35
USP6NL-202ENST00000379237 MCM6Q14566 821 aa12.88□□□□□ -0.35
USP6NL-202ENST00000379237 CYP2E1P05181 493 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms