RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
BEST1-201ENST00000378043 RBM42Q9BTD8 480 aaKnown RBP13.63□□□□□ -0.23
BEST1-201ENST00000378043 FMN2Q9NZ56 1722 aa13.62□□□□□ -0.23
BEST1-201ENST00000378043 SOX12O15370 315 aa13.62□□□□□ -0.23
BEST1-201ENST00000378043 RGPD8O14715 1765 aaPredicted RBP13.62□□□□□ -0.23
BEST1-201ENST00000378043 FSD2A1L4K1 749 aa13.62□□□□□ -0.23
BEST1-201ENST00000378043 FOXO3O43524 673 aa13.62□□□□□ -0.23
BEST1-201ENST00000378043 MAP3K19Q56UN5 1328 aa13.62□□□□□ -0.23
BEST1-201ENST00000378043 MSH6P52701 1360 aa13.61□□□□□ -0.23
BEST1-201ENST00000378043 TRAK2O60296 914 aa13.61□□□□□ -0.23
BEST1-201ENST00000378043 CDC45O75419 566 aa13.61□□□□□ -0.23
BEST1-201ENST00000378043 CEP85Q6P2H3 762 aa13.61□□□□□ -0.23
BEST1-201ENST00000378043 MIS18AQ9NYP9 233 aa13.61□□□□□ -0.23
BEST1-201ENST00000378043 RTL1A6NKG5 1358 aa13.61□□□□□ -0.23
BEST1-201ENST00000378043 OTUD7AQ8TE49 926 aaPredicted RBP13.61□□□□□ -0.23
BEST1-201ENST00000378043 GZF1Q9H116 711 aaPredicted RBP13.61□□□□□ -0.23
BEST1-201ENST00000378043 MEIS3Q99687 375 aa13.6□□□□□ -0.23
BEST1-201ENST00000378043 PTPRCP08575 1304 aa13.6□□□□□ -0.23
BEST1-201ENST00000378043 HAP1P54257 671 aaPredicted RBP13.6□□□□□ -0.23
BEST1-201ENST00000378043 TTC22Q5TAA0 569 aa13.6□□□□□ -0.23
BEST1-201ENST00000378043 RPAP2Q8IXW5 612 aaPredicted RBP13.6□□□□□ -0.23
BEST1-201ENST00000378043 TNPO1Q92973 898 aaKnown RBP13.6□□□□□ -0.23
BEST1-201ENST00000378043 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
BEST1-201ENST00000378043 CEBPAP49715 358 aaPredicted RBP13.59□□□□□ -0.23
BEST1-201ENST00000378043 MTHFSDQ2M296 383 aaKnown RBP13.59□□□□□ -0.23
BEST1-201ENST00000378043 ARHGEF10O15013 1369 aa13.59□□□□□ -0.23
BEST1-201ENST00000378043 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
BEST1-201ENST00000378043 XRCC6P12956 609 aaKnown RBP eCLIP13.59□□□□□ -0.23
BEST1-201ENST00000378043 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
BEST1-201ENST00000378043 KDRP35968 1356 aa13.58□□□□□ -0.23
BEST1-201ENST00000378043 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
BEST1-201ENST00000378043 K7ELQ4 463 aaPredicted RBP13.58□□□□□ -0.24
BEST1-201ENST00000378043 RAB3GAP1Q15042 981 aa13.58□□□□□ -0.24
BEST1-201ENST00000378043 G2E3Q7L622 706 aa13.58□□□□□ -0.24
BEST1-201ENST00000378043 AMOTL2Q9Y2J4 779 aa13.58□□□□□ -0.24
BEST1-201ENST00000378043 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
BEST1-201ENST00000378043 TTC21AQ8NDW8 1320 aa13.57□□□□□ -0.24
BEST1-201ENST00000378043 DDX11L8A8MPP1 907 aa13.57□□□□□ -0.24
BEST1-201ENST00000378043 SMARCA5O60264 1052 aaPredicted RBP13.57□□□□□ -0.24
BEST1-201ENST00000378043 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
BEST1-201ENST00000378043 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
BEST1-201ENST00000378043 FLT4P35916 1363 aa13.56□□□□□ -0.24
BEST1-201ENST00000378043 PIK3C2AO00443 1686 aa13.56□□□□□ -0.24
BEST1-201ENST00000378043 GOLGA6L3A6NEY3 463 aa13.56□□□□□ -0.24
BEST1-201ENST00000378043 GAS2L2Q8NHY3 880 aa13.56□□□□□ -0.24
BEST1-201ENST00000378043 ARXQ96QS3 562 aa13.56□□□□□ -0.24
BEST1-201ENST00000378043 EYA1Q99502 592 aa13.56□□□□□ -0.24
BEST1-201ENST00000378043 AK9Q5TCS8 1911 aa13.56□□□□□ -0.24
BEST1-201ENST00000378043 F6X3S4 739 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 FAM43AQ8N2R8 423 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 DIP2AQ14689 1571 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 IGSF1Q8N6C5 1336 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 SDSP20132 328 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 USP26Q9BXU7 913 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 PANK2Q9BZ23 570 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 ANO8Q9HCE9 1232 aaPredicted RBP13.55□□□□□ -0.24
BEST1-201ENST00000378043 TSPYL4Q9UJ04 414 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 SLIT1O75093 1534 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 APBB1O00213 710 aa13.55□□□□□ -0.24
BEST1-201ENST00000378043 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
BEST1-201ENST00000378043 TBX22Q9Y458 520 aa13.54□□□□□ -0.24
BEST1-201ENST00000378043 EID1Q9Y6B2 187 aa13.54□□□□□ -0.24
BEST1-201ENST00000378043 MARF1Q9Y4F3 1742 aaKnown RBP13.54□□□□□ -0.24
BEST1-201ENST00000378043 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
BEST1-201ENST00000378043 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
BEST1-201ENST00000378043 SLC4A10Q6U841 1118 aa13.53□□□□□ -0.24
BEST1-201ENST00000378043 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
BEST1-201ENST00000378043 LRRC37A3O60309 1634 aa13.52□□□□□ -0.24
BEST1-201ENST00000378043 AMPHP49418 695 aa13.52□□□□□ -0.25
BEST1-201ENST00000378043 SSFA2P28290 1259 aa13.51□□□□□ -0.25
BEST1-201ENST00000378043 RABEP1Q15276 862 aa13.51□□□□□ -0.25
BEST1-201ENST00000378043 GBP4Q96PP9 640 aa13.51□□□□□ -0.25
BEST1-201ENST00000378043 NWD1Q149M9 1564 aa13.51□□□□□ -0.25
BEST1-201ENST00000378043 CCT4P50991 539 aaKnown RBP13.51□□□□□ -0.25
BEST1-201ENST00000378043 FAM208AQ9UK61 1670 aaKnown RBP13.51□□□□□ -0.25
BEST1-201ENST00000378043 TUBGCP6Q96RT7 1819 aa13.5□□□□□ -0.25
BEST1-201ENST00000378043 RRAGDQ9NQL2 400 aaPredicted RBP13.5□□□□□ -0.25
BEST1-201ENST00000378043 CACNA1FO60840 1977 aa13.5□□□□□ -0.25
BEST1-201ENST00000378043 XRN1Q8IZH2 1706 aaKnown RBP13.5□□□□□ -0.25
BEST1-201ENST00000378043 CLEC17AQ6ZS10 378 aa13.5□□□□□ -0.25
BEST1-201ENST00000378043 NLRP6P59044 892 aa13.49□□□□□ -0.25
BEST1-201ENST00000378043 OSBPL3Q9H4L5 887 aa13.49□□□□□ -0.25
BEST1-201ENST00000378043 HMMRO75330 724 aa13.49□□□□□ -0.25
BEST1-201ENST00000378043 PDE1AP54750 535 aa13.49□□□□□ -0.25
BEST1-201ENST00000378043 EIF5BO60841 1220 aaKnown RBP13.48□□□□□ -0.25
BEST1-201ENST00000378043 HOXC9P31274 260 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 MRE11P49959 708 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 GAS2L3Q86XJ1 694 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 SALL3Q9BXA9 1300 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
BEST1-201ENST00000378043 FLIIQ13045 1269 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 NUTM2GQ5VZR2 741 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 IL17REQ8NFR9 667 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 GRPEL1Q9HAV7 217 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 GNAT3A8MTJ3 354 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 GNAI2P04899 355 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 EXOC6BQ9Y2D4 811 aa13.48□□□□□ -0.25
BEST1-201ENST00000378043 STK31Q9BXU1 1019 aa13.47□□□□□ -0.25
BEST1-201ENST00000378043 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms