RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TMED8Q6PL24 325 aaPredicted RBP19.14■□□□□ 0.65
FXN-201ENST00000377270 PMFBP1Q8TBY8 1022 aa19.14■□□□□ 0.65
FXN-201ENST00000377270 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
FXN-201ENST00000377270 EMILIN1Q9Y6C2 1016 aa19.14■□□□□ 0.65
FXN-201ENST00000377270 TMEM2Q9UHN6 1383 aa19.13■□□□□ 0.65
FXN-201ENST00000377270 FAM135BQ49AJ0 1406 aa19.13■□□□□ 0.65
FXN-201ENST00000377270 ATP2B3Q16720 1220 aa19.12■□□□□ 0.65
FXN-201ENST00000377270 CHMP5Q9NZZ3 219 aa19.12■□□□□ 0.65
FXN-201ENST00000377270 HMOX1P09601 288 aa19.12■□□□□ 0.65
FXN-201ENST00000377270 DZIP1LQ8IYY4 767 aaKnown RBP19.12■□□□□ 0.65
FXN-201ENST00000377270 MVPQ14764 893 aaKnown RBP19.11■□□□□ 0.65
FXN-201ENST00000377270 SSH1Q8WYL5 1049 aa19.11■□□□□ 0.65
FXN-201ENST00000377270 CCDC173Q0VFZ6 552 aa19.1■□□□□ 0.65
FXN-201ENST00000377270 COG3Q96JB2 828 aa19.1■□□□□ 0.65
FXN-201ENST00000377270 MAP2P11137 1827 aaKnown RBP19.1■□□□□ 0.65
FXN-201ENST00000377270 TECPR2O15040 1411 aa19.1■□□□□ 0.65
FXN-201ENST00000377270 XPCQ01831 940 aaPredicted RBP19.09■□□□□ 0.65
FXN-201ENST00000377270 SPRYD3Q8NCJ5 442 aa19.09■□□□□ 0.65
FXN-201ENST00000377270 LRRC7Q96NW7 1537 aa19.09■□□□□ 0.65
FXN-201ENST00000377270 DDX11L8A8MPP1 907 aa19.09■□□□□ 0.65
FXN-201ENST00000377270 ZNF771Q7L3S4 317 aaPredicted RBP19.09■□□□□ 0.65
FXN-201ENST00000377270 PHACTR3Q96KR7 559 aa19.09■□□□□ 0.65
FXN-201ENST00000377270 ZNF622Q969S3 477 aaKnown RBP eCLIP19.08■□□□□ 0.65
FXN-201ENST00000377270 IL13P35225 146 aa19.08■□□□□ 0.64
FXN-201ENST00000377270 SASS6Q6UVJ0 657 aa19.08■□□□□ 0.64
FXN-201ENST00000377270 GAS2L3Q86XJ1 694 aa19.08■□□□□ 0.64
FXN-201ENST00000377270 RWDD1Q9H446 243 aaPredicted RBP19.08■□□□□ 0.64
FXN-201ENST00000377270 CDC42BPGQ6DT37 1551 aa19.08■□□□□ 0.64
FXN-201ENST00000377270 TRIM27P14373 513 aa19.07■□□□□ 0.64
FXN-201ENST00000377270 CEBPAP49715 358 aaPredicted RBP19.07■□□□□ 0.64
FXN-201ENST00000377270 PPP1R9BQ96SB3 815 aa19.07■□□□□ 0.64
FXN-201ENST00000377270 PRR36Q9H6K5 1346 aa19.07■□□□□ 0.64
FXN-201ENST00000377270 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
FXN-201ENST00000377270 LTKP29376 864 aa19.07■□□□□ 0.64
FXN-201ENST00000377270 RRS1Q15050 365 aaKnown RBP19.07■□□□□ 0.64
FXN-201ENST00000377270 ZNF692Q9BU19 519 aaPredicted RBP19.07■□□□□ 0.64
FXN-201ENST00000377270 NOB1Q9ULX3 412 aaKnown RBP19.07■□□□□ 0.64
FXN-201ENST00000377270 UBR1Q8IWV7 1749 aa19.07■□□□□ 0.64
FXN-201ENST00000377270 NFE2L2Q16236 605 aa19.06■□□□□ 0.64
FXN-201ENST00000377270 KNDC1Q76NI1 1749 aa19.06■□□□□ 0.64
FXN-201ENST00000377270 CPS1P31327 1500 aa19.06■□□□□ 0.64
FXN-201ENST00000377270 AXDND1Q5T1B0 1012 aaPredicted RBP19.06■□□□□ 0.64
FXN-201ENST00000377270 ATF7IPQ6VMQ6 1270 aa19.06■□□□□ 0.64
FXN-201ENST00000377270 ADAMTS13Q76LX8 1427 aa19.05■□□□□ 0.64
FXN-201ENST00000377270 AATKQ6ZMQ8 1374 aa19.05■□□□□ 0.64
FXN-201ENST00000377270 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.05■□□□□ 0.64
FXN-201ENST00000377270 NUTM2FA1L443 756 aa19.04■□□□□ 0.64
FXN-201ENST00000377270 ZNF500O60304 480 aaPredicted RBP19.04■□□□□ 0.64
FXN-201ENST00000377270 TRIM6-TRIM34B2RNG4 842 aa19.04■□□□□ 0.64
FXN-201ENST00000377270 ITPRIPQ8IWB1 547 aa19.04■□□□□ 0.64
FXN-201ENST00000377270 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
FXN-201ENST00000377270 TRIM34Q9BYJ4 488 aa19.04■□□□□ 0.64
FXN-201ENST00000377270 PDZRN3Q9UPQ7 1066 aa19.04■□□□□ 0.64
FXN-201ENST00000377270 SLC26A8Q96RN1 970 aa19.04■□□□□ 0.64
FXN-201ENST00000377270 PRR29P0C7W0 189 aa19.03■□□□□ 0.64
FXN-201ENST00000377270 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.64
FXN-201ENST00000377270 PTMAP06454 111 aaKnown RBP19.02■□□□□ 0.64
FXN-201ENST00000377270 DDX19BQ9UMR2 479 aa19.02■□□□□ 0.64
FXN-201ENST00000377270 SPDYE4A6NLX3 237 aa19.02■□□□□ 0.63
FXN-201ENST00000377270 GEMIN8Q9NWZ8 242 aaKnown RBP19.02■□□□□ 0.63
FXN-201ENST00000377270 PLEKHG1Q9ULL1 1385 aa19.02■□□□□ 0.63
FXN-201ENST00000377270 IPO8O15397 1037 aaKnown RBP19.01■□□□□ 0.63
FXN-201ENST00000377270 ZNF710Q8N1W2 664 aa19.01■□□□□ 0.63
FXN-201ENST00000377270 MON2Q7Z3U7 1717 aa19.01■□□□□ 0.63
FXN-201ENST00000377270 YY1AP1Q9H869 796 aa19.01■□□□□ 0.63
FXN-201ENST00000377270 EID1Q9Y6B2 187 aa19.01■□□□□ 0.63
FXN-201ENST00000377270 KIF16BQ96L93 1317 aa19■□□□□ 0.63
FXN-201ENST00000377270 ALDH1L2Q3SY69 923 aa19■□□□□ 0.63
FXN-201ENST00000377270 GRIPAP1Q4V328 841 aa19■□□□□ 0.63
FXN-201ENST00000377270 TMEM57Q8N5G2 664 aa19■□□□□ 0.63
FXN-201ENST00000377270 ACEP12821 1306 aa19■□□□□ 0.63
FXN-201ENST00000377270 PTMSP20962 102 aa19■□□□□ 0.63
FXN-201ENST00000377270 CSPP1Q1MSJ5 1256 aa19■□□□□ 0.63
FXN-201ENST00000377270 JARID2Q92833 1246 aaPredicted RBP19■□□□□ 0.63
FXN-201ENST00000377270 TTC21BQ7Z4L5 1316 aa18.99■□□□□ 0.63
FXN-201ENST00000377270 ITSN1Q15811 1721 aa18.98■□□□□ 0.63
FXN-201ENST00000377270 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
FXN-201ENST00000377270 CAPN2P17655 700 aa18.98■□□□□ 0.63
FXN-201ENST00000377270 GNAI1P63096 354 aa18.98■□□□□ 0.63
FXN-201ENST00000377270 C3P01024 1663 aa18.97■□□□□ 0.63
FXN-201ENST00000377270 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
FXN-201ENST00000377270 TSC1Q92574 1164 aa18.97■□□□□ 0.63
FXN-201ENST00000377270 IFT57Q9NWB7 429 aa18.97■□□□□ 0.63
FXN-201ENST00000377270 NOL7Q9UMY1 257 aaKnown RBP18.97■□□□□ 0.63
FXN-201ENST00000377270 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
FXN-201ENST00000377270 ZNF428Q96B54 188 aa18.96■□□□□ 0.63
FXN-201ENST00000377270 VAMP4O75379 141 aa18.96■□□□□ 0.63
FXN-201ENST00000377270 NASPP49321 788 aaPredicted RBP18.96■□□□□ 0.63
FXN-201ENST00000377270 FAM43BQ6ZT52 329 aaPredicted RBP18.96■□□□□ 0.63
FXN-201ENST00000377270 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.96■□□□□ 0.63
FXN-201ENST00000377270 AMOTL2Q9Y2J4 779 aa18.96■□□□□ 0.63
FXN-201ENST00000377270 ELL2O00472 640 aaPredicted RBP18.95■□□□□ 0.62
FXN-201ENST00000377270 TSPYL6Q8N831 410 aa18.95■□□□□ 0.62
FXN-201ENST00000377270 C22orf23Q9BZE7 217 aa18.95■□□□□ 0.62
FXN-201ENST00000377270 PTPRUQ92729 1446 aa18.95■□□□□ 0.62
FXN-201ENST00000377270 LOC102724159A0A0B4J2E5 919 aa18.95■□□□□ 0.62
FXN-201ENST00000377270 LMOD3Q0VAK6 560 aa18.95■□□□□ 0.62
FXN-201ENST00000377270 HDAC1Q13547 482 aaPredicted RBP18.95■□□□□ 0.62
FXN-201ENST00000377270 PWP2Q15269 919 aaKnown RBP18.95■□□□□ 0.62
FXN-201ENST00000377270 EP400NLQ6ZTU2 488 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms