RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
CXCL12-203ENST00000374429 CPS1P31327 1500 aa13.41□□□□□ -0.26
CXCL12-203ENST00000374429 GNAT3A8MTJ3 354 aa13.41□□□□□ -0.26
CXCL12-203ENST00000374429 SIL1Q9H173 461 aa13.41□□□□□ -0.26
CXCL12-203ENST00000374429 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
CXCL12-203ENST00000374429 CD163L1Q9NR16 1453 aa13.41□□□□□ -0.26
CXCL12-203ENST00000374429 HOXC9P31274 260 aa13.4□□□□□ -0.26
CXCL12-203ENST00000374429 CHMP3Q9Y3E7 222 aa13.4□□□□□ -0.26
CXCL12-203ENST00000374429 GOLGB1Q14789 3259 aaKnown RBP13.4□□□□□ -0.26
CXCL12-203ENST00000374429 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
CXCL12-203ENST00000374429 C1orf141Q5JVX7 400 aa13.4□□□□□ -0.26
CXCL12-203ENST00000374429 IL17REQ8NFR9 667 aa13.39□□□□□ -0.27
CXCL12-203ENST00000374429 ARHGEF40Q8TER5 1519 aa13.39□□□□□ -0.27
CXCL12-203ENST00000374429 LRRFIP2Q9Y608 721 aaKnown RBP13.39□□□□□ -0.27
CXCL12-203ENST00000374429 LAMC1P11047 1609 aa13.39□□□□□ -0.27
CXCL12-203ENST00000374429 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
CXCL12-203ENST00000374429 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
CXCL12-203ENST00000374429 PPLO60437 1756 aa13.38□□□□□ -0.27
CXCL12-203ENST00000374429 RBM10P98175 930 aaKnown RBP13.38□□□□□ -0.27
CXCL12-203ENST00000374429 FLIIQ13045 1269 aa13.38□□□□□ -0.27
CXCL12-203ENST00000374429 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
CXCL12-203ENST00000374429 TBC1D9Q6ZT07 1266 aa13.38□□□□□ -0.27
CXCL12-203ENST00000374429 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
CXCL12-203ENST00000374429 ATF3P18847 181 aa13.38□□□□□ -0.27
CXCL12-203ENST00000374429 TAF7Q15545 349 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-203ENST00000374429 CCDC85AQ96PX6 553 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-203ENST00000374429 CFAP74Q9C0B2 1584 aa13.38□□□□□ -0.27
CXCL12-203ENST00000374429 NINLQ9Y2I6 1382 aa13.37□□□□□ -0.27
CXCL12-203ENST00000374429 USP19O94966 1318 aa13.37□□□□□ -0.27
CXCL12-203ENST00000374429 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
CXCL12-203ENST00000374429 CHPF2Q9P2E5 772 aa13.37□□□□□ -0.27
CXCL12-203ENST00000374429 TBX22Q9Y458 520 aa13.37□□□□□ -0.27
CXCL12-203ENST00000374429 NUCB1Q02818 461 aa13.37□□□□□ -0.27
CXCL12-203ENST00000374429 CHAMP1Q96JM3 812 aa13.37□□□□□ -0.27
CXCL12-203ENST00000374429 PI4KAP2A4QPH2 592 aa13.36□□□□□ -0.27
CXCL12-203ENST00000374429 GSE1Q14687 1217 aa13.36□□□□□ -0.27
CXCL12-203ENST00000374429 PI4KAP1Q8N8J0 262 aa13.36□□□□□ -0.27
CXCL12-203ENST00000374429 C9orf78Q9NZ63 289 aaPredicted RBP13.36□□□□□ -0.27
CXCL12-203ENST00000374429 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
CXCL12-203ENST00000374429 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
CXCL12-203ENST00000374429 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
CXCL12-203ENST00000374429 GCP02774 474 aa13.36□□□□□ -0.27
CXCL12-203ENST00000374429 PDIA4P13667 645 aaKnown RBP13.36□□□□□ -0.27
CXCL12-203ENST00000374429 PNMA6EA0A0J9YXQ4 647 aa13.35□□□□□ -0.27
CXCL12-203ENST00000374429 SYTL4Q96C24 671 aaPredicted RBP13.35□□□□□ -0.27
CXCL12-203ENST00000374429 TBC1D32Q96NH3 1257 aa13.35□□□□□ -0.27
CXCL12-203ENST00000374429 DIP2BQ9P265 1576 aa13.35□□□□□ -0.27
CXCL12-203ENST00000374429 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
CXCL12-203ENST00000374429 CHL1O00533 1208 aa13.35□□□□□ -0.27
CXCL12-203ENST00000374429 UBTFL1P0CB47 393 aaPredicted RBP13.35□□□□□ -0.27
CXCL12-203ENST00000374429 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
CXCL12-203ENST00000374429 PTPRUQ92729 1446 aa13.35□□□□□ -0.27
CXCL12-203ENST00000374429 MSH6P52701 1360 aa13.35□□□□□ -0.27
CXCL12-203ENST00000374429 CWF19L2Q2TBE0 894 aaKnown RBP13.34□□□□□ -0.27
CXCL12-203ENST00000374429 CCDC30Q5VVM6 783 aa13.34□□□□□ -0.27
CXCL12-203ENST00000374429 SMC5Q8IY18 1101 aa13.34□□□□□ -0.27
CXCL12-203ENST00000374429 AXIN2Q9Y2T1 843 aa13.34□□□□□ -0.27
CXCL12-203ENST00000374429 PREX1Q8TCU6 1659 aa13.34□□□□□ -0.27
CXCL12-203ENST00000374429 IL16Q14005 1332 aa13.34□□□□□ -0.27
CXCL12-203ENST00000374429 SRGAP3O43295 1099 aa13.34□□□□□ -0.27
CXCL12-203ENST00000374429 CD2BP2O95400 341 aaKnown RBP13.34□□□□□ -0.27
CXCL12-203ENST00000374429 CT47B1P0C2W7 299 aaPredicted RBP13.34□□□□□ -0.27
CXCL12-203ENST00000374429 HDAC1Q13547 482 aaPredicted RBP13.34□□□□□ -0.27
CXCL12-203ENST00000374429 ANKRD24Q8TF21 1146 aa13.34□□□□□ -0.27
CXCL12-203ENST00000374429 RAPGEF4Q8WZA2 1011 aa13.34□□□□□ -0.27
CXCL12-203ENST00000374429 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
CXCL12-203ENST00000374429 RICTORQ6R327 1708 aa13.34□□□□□ -0.27
CXCL12-203ENST00000374429 KLHDC4Q8TBB5 520 aa13.33□□□□□ -0.28
CXCL12-203ENST00000374429 UPF3BQ9BZI7 483 aaKnown RBP13.33□□□□□ -0.28
CXCL12-203ENST00000374429 PA2G4Q9UQ80 394 aaKnown RBP13.33□□□□□ -0.28
CXCL12-203ENST00000374429 LRRC7Q96NW7 1537 aa13.33□□□□□ -0.28
CXCL12-203ENST00000374429 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
CXCL12-203ENST00000374429 FGD1P98174 961 aa13.33□□□□□ -0.28
CXCL12-203ENST00000374429 GNAI2P04899 355 aa13.32□□□□□ -0.28
CXCL12-203ENST00000374429 HSP90AA2PQ14568 343 aaPredicted RBP13.32□□□□□ -0.28
CXCL12-203ENST00000374429 CEP85Q6P2H3 762 aa13.32□□□□□ -0.28
CXCL12-203ENST00000374429 ARHGEF28Q8N1W1 1705 aaKnown RBP13.32□□□□□ -0.28
CXCL12-203ENST00000374429 ZFYVE9O95405 1425 aa13.32□□□□□ -0.28
CXCL12-203ENST00000374429 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
CXCL12-203ENST00000374429 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
CXCL12-203ENST00000374429 ATP5J2-PTCD1G3V325 749 aa13.31□□□□□ -0.28
CXCL12-203ENST00000374429 HMMRO75330 724 aa13.31□□□□□ -0.28
CXCL12-203ENST00000374429 NBPF7P0C2Y1 421 aaPredicted RBP13.31□□□□□ -0.28
CXCL12-203ENST00000374429 GSPT1P15170 499 aaKnown RBP13.31□□□□□ -0.28
CXCL12-203ENST00000374429 SDSP20132 328 aa13.31□□□□□ -0.28
CXCL12-203ENST00000374429 PROSER3Q2NL68 480 aa13.31□□□□□ -0.28
CXCL12-203ENST00000374429 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
CXCL12-203ENST00000374429 ADAMTS13Q76LX8 1427 aa13.31□□□□□ -0.28
CXCL12-203ENST00000374429 FAM177BA6PVY3 158 aa13.31□□□□□ -0.28
CXCL12-203ENST00000374429 ZNF853P0CG23 659 aa13.31□□□□□ -0.28
CXCL12-203ENST00000374429 GCC1Q96CN9 775 aa13.31□□□□□ -0.28
CXCL12-203ENST00000374429 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
CXCL12-203ENST00000374429 USP6P35125 1406 aa13.3□□□□□ -0.28
CXCL12-203ENST00000374429 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
CXCL12-203ENST00000374429 PLEKHM2Q8IWE5 1019 aa13.3□□□□□ -0.28
CXCL12-203ENST00000374429 FLT4P35916 1363 aa13.3□□□□□ -0.28
CXCL12-203ENST00000374429 PNPLA6Q8IY17 1366 aa13.3□□□□□ -0.28
CXCL12-203ENST00000374429 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
CXCL12-203ENST00000374429 KCNJ4P48050 445 aa13.3□□□□□ -0.28
CXCL12-203ENST00000374429 RIC3Q7Z5B4 369 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms