RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 TMEM131LA2VDJ0 1609 aa17.15■□□□□ 0.34
COL16A1-202ENST00000373668 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
COL16A1-202ENST00000373668 NKTRP30414 1462 aaKnown RBP17.14■□□□□ 0.33
COL16A1-202ENST00000373668 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.33
COL16A1-202ENST00000373668 AXIN2Q9Y2T1 843 aa17.14■□□□□ 0.33
COL16A1-202ENST00000373668 PCDHB15Q9Y5E8 787 aa17.14■□□□□ 0.33
COL16A1-202ENST00000373668 ZMYM4Q5VZL5 1548 aa17.14■□□□□ 0.33
COL16A1-202ENST00000373668 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.33
COL16A1-202ENST00000373668 HSP90AB1P08238 724 aaKnown RBP17.14■□□□□ 0.33
COL16A1-202ENST00000373668 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
COL16A1-202ENST00000373668 TTC21AQ8NDW8 1320 aa17.14■□□□□ 0.33
COL16A1-202ENST00000373668 TBC1D2Q9BYX2 928 aa17.13■□□□□ 0.33
COL16A1-202ENST00000373668 KCNQ3O43525 872 aa17.13■□□□□ 0.33
COL16A1-202ENST00000373668 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
COL16A1-202ENST00000373668 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
COL16A1-202ENST00000373668 C22orf23Q9BZE7 217 aa17.11■□□□□ 0.33
COL16A1-202ENST00000373668 POLR1AO95602 1720 aaPredicted RBP17.11■□□□□ 0.33
COL16A1-202ENST00000373668 UBAP1LF5GYI3 381 aa17.11■□□□□ 0.33
COL16A1-202ENST00000373668 MVPQ14764 893 aaKnown RBP17.11■□□□□ 0.33
COL16A1-202ENST00000373668 SIRT1Q96EB6 747 aa17.11■□□□□ 0.33
COL16A1-202ENST00000373668 NPHP3Q7Z494 1330 aa17.11■□□□□ 0.33
COL16A1-202ENST00000373668 G2E3Q7L622 706 aa17.1■□□□□ 0.33
COL16A1-202ENST00000373668 FLT4P35916 1363 aa17.1■□□□□ 0.33
COL16A1-202ENST00000373668 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
COL16A1-202ENST00000373668 VAMP4O75379 141 aa17.1■□□□□ 0.33
COL16A1-202ENST00000373668 ANP32BQ92688 251 aaKnown RBP17.1■□□□□ 0.33
COL16A1-202ENST00000373668 NRXN1Q9ULB1 1477 aa17.1■□□□□ 0.33
COL16A1-202ENST00000373668 USP6P35125 1406 aa17.09■□□□□ 0.33
COL16A1-202ENST00000373668 TRAK2O60296 914 aa17.09■□□□□ 0.33
COL16A1-202ENST00000373668 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
COL16A1-202ENST00000373668 NCLP19338 710 aaKnown RBP17.09■□□□□ 0.33
COL16A1-202ENST00000373668 IP6K1Q92551 441 aa17.09■□□□□ 0.33
COL16A1-202ENST00000373668 CHMP5Q9NZZ3 219 aa17.09■□□□□ 0.33
COL16A1-202ENST00000373668 CABP4P57796 275 aa17.09■□□□□ 0.33
COL16A1-202ENST00000373668 CCDC85AQ96PX6 553 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-202ENST00000373668 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
COL16A1-202ENST00000373668 MCM4P33991 863 aa17.08■□□□□ 0.33
COL16A1-202ENST00000373668 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.33
COL16A1-202ENST00000373668 TPRNQ4KMQ1 711 aa17.08■□□□□ 0.33
COL16A1-202ENST00000373668 C9orf78Q9NZ63 289 aaPredicted RBP17.08■□□□□ 0.33
COL16A1-202ENST00000373668 IFT57Q9NWB7 429 aa17.08■□□□□ 0.32
COL16A1-202ENST00000373668 RIMS1Q86UR5 1692 aaKnown RBP17.08■□□□□ 0.32
COL16A1-202ENST00000373668 PANK2Q9BZ23 570 aa17.07■□□□□ 0.32
COL16A1-202ENST00000373668 API5Q9BZZ5 524 aaKnown RBP17.07■□□□□ 0.32
COL16A1-202ENST00000373668 PPLO60437 1756 aa17.07■□□□□ 0.32
COL16A1-202ENST00000373668 CPS1P31327 1500 aa17.07■□□□□ 0.32
COL16A1-202ENST00000373668 RRAGDQ9NQL2 400 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-202ENST00000373668 IL17REQ8NFR9 667 aa17.06■□□□□ 0.32
COL16A1-202ENST00000373668 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
COL16A1-202ENST00000373668 SMARCA5O60264 1052 aaPredicted RBP17.06■□□□□ 0.32
COL16A1-202ENST00000373668 RIC3Q7Z5B4 369 aa17.06■□□□□ 0.32
COL16A1-202ENST00000373668 PHAXQ9H814 394 aaKnown RBP17.06■□□□□ 0.32
COL16A1-202ENST00000373668 BTG4Q9NY30 223 aa17.06■□□□□ 0.32
COL16A1-202ENST00000373668 SPATA31D1Q6ZQQ2 1576 aa17.05■□□□□ 0.32
COL16A1-202ENST00000373668 NPHP1O15259 732 aa17.05■□□□□ 0.32
COL16A1-202ENST00000373668 MEX3CQ5U5Q3 659 aaKnown RBP17.05■□□□□ 0.32
COL16A1-202ENST00000373668 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
COL16A1-202ENST00000373668 CCDC30Q5VVM6 783 aa17.04■□□□□ 0.32
COL16A1-202ENST00000373668 TBC1D32Q96NH3 1257 aa17.04■□□□□ 0.32
COL16A1-202ENST00000373668 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
COL16A1-202ENST00000373668 XRCC6P12956 609 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL16A1-202ENST00000373668 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
COL16A1-202ENST00000373668 ACSBG1Q96GR2 724 aa17.04■□□□□ 0.32
COL16A1-202ENST00000373668 EXOC6BQ9Y2D4 811 aa17.04■□□□□ 0.32
COL16A1-202ENST00000373668 PRAMEF22A3QJZ6 481 aa17.04■□□□□ 0.32
COL16A1-202ENST00000373668 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
COL16A1-202ENST00000373668 USP19O94966 1318 aa17.02■□□□□ 0.32
COL16A1-202ENST00000373668 TSHZ3Q63HK5 1081 aa17.02■□□□□ 0.32
COL16A1-202ENST00000373668 BRINP3Q76B58 766 aa17.02■□□□□ 0.32
COL16A1-202ENST00000373668 NGLY1Q96IV0 654 aa17.02■□□□□ 0.32
COL16A1-202ENST00000373668 MEIS3Q99687 375 aa17.02■□□□□ 0.32
COL16A1-202ENST00000373668 SIL1Q9H173 461 aa17.02■□□□□ 0.32
COL16A1-202ENST00000373668 HSP90AA2PQ14568 343 aaPredicted RBP17.02■□□□□ 0.31
COL16A1-202ENST00000373668 IL1RAPL2Q9NP60 686 aa17.02■□□□□ 0.31
COL16A1-202ENST00000373668 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.31
COL16A1-202ENST00000373668 FAM182BQ5T319 152 aa17.01■□□□□ 0.31
COL16A1-202ENST00000373668 RILPL2Q969X0 211 aa17.01■□□□□ 0.31
COL16A1-202ENST00000373668 C8orf37Q96NL8 207 aa17.01■□□□□ 0.31
COL16A1-202ENST00000373668 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
COL16A1-202ENST00000373668 GOLGA6L22H0YM25 854 aa17.01■□□□□ 0.31
COL16A1-202ENST00000373668 CCDC27Q2M243 656 aa17.01■□□□□ 0.31
COL16A1-202ENST00000373668 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
COL16A1-202ENST00000373668 PI4KAP2A4QPH2 592 aa17■□□□□ 0.31
COL16A1-202ENST00000373668 PI4KAP1Q8N8J0 262 aa17■□□□□ 0.31
COL16A1-202ENST00000373668 SBNO1A3KN83 1393 aa17■□□□□ 0.31
COL16A1-202ENST00000373668 ATP5J2-PTCD1G3V325 749 aa17■□□□□ 0.31
COL16A1-202ENST00000373668 NOL8Q76FK4 1167 aaKnown RBP17■□□□□ 0.31
COL16A1-202ENST00000373668 GBP4Q96PP9 640 aa17■□□□□ 0.31
COL16A1-202ENST00000373668 INSRP06213 1382 aa17■□□□□ 0.31
COL16A1-202ENST00000373668 DDX11L8A8MPP1 907 aa17■□□□□ 0.31
COL16A1-202ENST00000373668 LARP1Q6PKG0 1096 aaKnown RBP17■□□□□ 0.31
COL16A1-202ENST00000373668 KIAA0232Q92628 1395 aa16.99■□□□□ 0.31
COL16A1-202ENST00000373668 MAP4K4O95819 1239 aaPredicted RBP16.99■□□□□ 0.31
COL16A1-202ENST00000373668 FLIIQ13045 1269 aa16.99■□□□□ 0.31
COL16A1-202ENST00000373668 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
COL16A1-202ENST00000373668 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
COL16A1-202ENST00000373668 ATP7BP35670 1465 aa16.99■□□□□ 0.31
COL16A1-202ENST00000373668 MRE11P49959 708 aa16.98■□□□□ 0.31
COL16A1-202ENST00000373668 MRPL50Q8N5N7 158 aaKnown RBP16.98■□□□□ 0.31
COL16A1-202ENST00000373668 ZMYND15Q9H091 742 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms