RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 KRT28Q7Z3Y7 464 aa24.97■■□□□ 1.59
HDAC1-201ENST00000373548 RTF1Q92541 710 aaKnown RBP24.97■■□□□ 1.59
HDAC1-201ENST00000373548 LRRC37A3O60309 1634 aa24.96■■□□□ 1.59
HDAC1-201ENST00000373548 KIAA0232Q92628 1395 aa24.96■■□□□ 1.59
HDAC1-201ENST00000373548 DCCP43146 1447 aa24.95■■□□□ 1.59
HDAC1-201ENST00000373548 NCOA3Q9Y6Q9 1424 aa24.95■■□□□ 1.59
HDAC1-201ENST00000373548 KRT24Q2M2I5 525 aa24.95■■□□□ 1.58
HDAC1-201ENST00000373548 RWDD1Q9H446 243 aaPredicted RBP24.95■■□□□ 1.58
HDAC1-201ENST00000373548 GCP02774 474 aa24.94■■□□□ 1.58
HDAC1-201ENST00000373548 RGPD2P0DJD1 1756 aa24.94■■□□□ 1.58
HDAC1-201ENST00000373548 USP19O94966 1318 aa24.94■■□□□ 1.58
HDAC1-201ENST00000373548 ATF3P18847 181 aa24.94■■□□□ 1.58
HDAC1-201ENST00000373548 USHBP1Q8N6Y0 703 aa24.94■■□□□ 1.58
HDAC1-201ENST00000373548 HTATSF1O43719 755 aaKnown RBP24.93■■□□□ 1.58
HDAC1-201ENST00000373548 ZBTB40Q9NUA8 1239 aa24.93■■□□□ 1.58
HDAC1-201ENST00000373548 ALS2Q96Q42 1657 aa24.93■■□□□ 1.58
HDAC1-201ENST00000373548 ZBTB7CA1YPR0 619 aa24.92■■□□□ 1.58
HDAC1-201ENST00000373548 LMOD2Q6P5Q4 547 aa24.92■■□□□ 1.58
HDAC1-201ENST00000373548 ARHGEF25Q86VW2 580 aa24.92■■□□□ 1.58
HDAC1-201ENST00000373548 MSH6P52701 1360 aa24.91■■□□□ 1.58
HDAC1-201ENST00000373548 GNAT3A8MTJ3 354 aa24.91■■□□□ 1.58
HDAC1-201ENST00000373548 NBPF6Q5VWK0 638 aa24.91■■□□□ 1.58
HDAC1-201ENST00000373548 NBPF4Q96M43 638 aa24.91■■□□□ 1.58
HDAC1-201ENST00000373548 ABCC4O15439 1325 aa24.9■■□□□ 1.58
HDAC1-201ENST00000373548 MIS18AQ9NYP9 233 aa24.9■■□□□ 1.58
HDAC1-201ENST00000373548 HAP1P54257 671 aaPredicted RBP24.89■■□□□ 1.58
HDAC1-201ENST00000373548 MAP3K5Q99683 1374 aa24.89■■□□□ 1.58
HDAC1-201ENST00000373548 ANP32AP39687 249 aaKnown RBP24.89■■□□□ 1.57
HDAC1-201ENST00000373548 PLEKHG5O94827 1062 aa24.88■■□□□ 1.57
HDAC1-201ENST00000373548 HDAC1Q13547 482 aaPredicted RBP24.88■■□□□ 1.57
HDAC1-201ENST00000373548 TSPYL4Q9UJ04 414 aa24.88■■□□□ 1.57
HDAC1-201ENST00000373548 LMTK3Q96Q04 1460 aa24.88■■□□□ 1.57
HDAC1-201ENST00000373548 FAM161AQ3B820 660 aa24.88■■□□□ 1.57
HDAC1-201ENST00000373548 XIRP1Q702N8 1843 aaKnown RBP24.87■■□□□ 1.57
HDAC1-201ENST00000373548 STRCQ7RTU9 1775 aa24.87■■□□□ 1.57
HDAC1-201ENST00000373548 C8orf34Q49A92 452 aa24.87■■□□□ 1.57
HDAC1-201ENST00000373548 API5Q9BZZ5 524 aaKnown RBP24.86■■□□□ 1.57
HDAC1-201ENST00000373548 PDZRN3Q9UPQ7 1066 aa24.86■■□□□ 1.57
HDAC1-201ENST00000373548 MED1Q15648 1581 aaPredicted RBP24.85■■□□□ 1.57
HDAC1-201ENST00000373548 ZBTB7BO15156 539 aaPredicted RBP24.85■■□□□ 1.57
HDAC1-201ENST00000373548 CADPS2Q86UW7 1296 aa24.85■■□□□ 1.57
HDAC1-201ENST00000373548 IL17REQ8NFR9 667 aa24.85■■□□□ 1.57
HDAC1-201ENST00000373548 LRRC59Q96AG4 307 aaKnown RBP24.85■■□□□ 1.57
HDAC1-201ENST00000373548 NCAPD2Q15021 1401 aa24.83■■□□□ 1.57
HDAC1-201ENST00000373548 DDX17Q92841 729 aaKnown RBP24.83■■□□□ 1.57
HDAC1-201ENST00000373548 VIRMAQ69YN4 1812 aaKnown RBP24.83■■□□□ 1.57
HDAC1-201ENST00000373548 RGPD5Q99666 1765 aa24.82■■□□□ 1.56
HDAC1-201ENST00000373548 CAMTA1Q9Y6Y1 1673 aa24.82■■□□□ 1.56
HDAC1-201ENST00000373548 NPM2Q86SE8 214 aaKnown RBP24.82■■□□□ 1.56
HDAC1-201ENST00000373548 RGS12O14924 1447 aa24.81■■□□□ 1.56
HDAC1-201ENST00000373548 CHMP4BQ9H444 224 aaKnown RBP24.81■■□□□ 1.56
HDAC1-201ENST00000373548 ANKRD24Q8TF21 1146 aa24.8■■□□□ 1.56
HDAC1-201ENST00000373548 IPO9Q96P70 1041 aaKnown RBP24.8■■□□□ 1.56
HDAC1-201ENST00000373548 AXIN2Q9Y2T1 843 aa24.8■■□□□ 1.56
HDAC1-201ENST00000373548 LMO7Q8WWI1 1683 aa24.79■■□□□ 1.56
HDAC1-201ENST00000373548 SMC5Q8IY18 1101 aa24.79■■□□□ 1.56
HDAC1-201ENST00000373548 NPHP3Q7Z494 1330 aa24.78■■□□□ 1.56
HDAC1-201ENST00000373548 CEMIPQ8WUJ3 1361 aa24.77■■□□□ 1.56
HDAC1-201ENST00000373548 TAF7Q15545 349 aaPredicted RBP24.77■■□□□ 1.56
HDAC1-201ENST00000373548 BABAM1Q9NWV8 329 aa24.77■■□□□ 1.56
HDAC1-201ENST00000373548 PTPRCP08575 1304 aa24.77■■□□□ 1.56
HDAC1-201ENST00000373548 PXDNQ92626 1479 aa24.77■■□□□ 1.56
HDAC1-201ENST00000373548 ZC3H6P61129 1189 aaKnown RBP24.76■■□□□ 1.55
HDAC1-201ENST00000373548 INTS3Q68E01 1043 aaKnown RBP24.76■■□□□ 1.55
HDAC1-201ENST00000373548 TNS3Q68CZ2 1445 aa24.75■■□□□ 1.55
HDAC1-201ENST00000373548 SLC4A2P04920 1241 aa24.75■■□□□ 1.55
HDAC1-201ENST00000373548 FAM208AQ9UK61 1670 aaKnown RBP24.75■■□□□ 1.55
HDAC1-201ENST00000373548 C1orf115Q9H7X2 142 aa24.74■■□□□ 1.55
HDAC1-201ENST00000373548 PLEKHO1Q53GL0 409 aaPredicted RBP24.73■■□□□ 1.55
HDAC1-201ENST00000373548 CRYBG1Q9Y4K1 1723 aa24.73■■□□□ 1.55
HDAC1-201ENST00000373548 ZNF530Q6P9A1 599 aaPredicted RBP24.73■■□□□ 1.55
HDAC1-201ENST00000373548 COL18A1P39060 1754 aa24.73■■□□□ 1.55
HDAC1-201ENST00000373548 ERBB3P21860 1342 aa24.72■■□□□ 1.55
HDAC1-201ENST00000373548 LGR6Q9HBX8 967 aa24.72■■□□□ 1.55
HDAC1-201ENST00000373548 AMOTQ4VCS5 1084 aa24.71■■□□□ 1.55
HDAC1-201ENST00000373548 AKAP4Q5JQC9 854 aa24.71■■□□□ 1.55
HDAC1-201ENST00000373548 CACNA1FO60840 1977 aa24.71■■□□□ 1.55
HDAC1-201ENST00000373548 G2E3Q7L622 706 aa24.71■■□□□ 1.55
HDAC1-201ENST00000373548 NOP58Q9Y2X3 529 aaKnown RBP24.71■■□□□ 1.55
HDAC1-201ENST00000373548 SOS1Q07889 1333 aaPredicted RBP24.71■■□□□ 1.55
HDAC1-201ENST00000373548 KDM3BQ7LBC6 1761 aa24.7■■□□□ 1.55
HDAC1-201ENST00000373548 SPATA31A3Q5VYP0 1347 aa24.7■■□□□ 1.54
HDAC1-201ENST00000373548 ANP32EQ9BTT0 268 aa24.7■■□□□ 1.54
HDAC1-201ENST00000373548 ZNF335Q9H4Z2 1342 aaPredicted RBP24.69■■□□□ 1.54
HDAC1-201ENST00000373548 SIRT2Q8IXJ6 389 aa24.69■■□□□ 1.54
HDAC1-201ENST00000373548 BRINP3Q76B58 766 aa24.68■■□□□ 1.54
HDAC1-201ENST00000373548 CABLES1Q8TDN4 633 aa24.68■■□□□ 1.54
HDAC1-201ENST00000373548 ERICH6Q7L0X2 663 aa24.68■■□□□ 1.54
HDAC1-201ENST00000373548 STK31Q9BXU1 1019 aa24.68■■□□□ 1.54
HDAC1-201ENST00000373548 NUCB1Q02818 461 aa24.67■■□□□ 1.54
HDAC1-201ENST00000373548 CCDC30Q5VVM6 783 aa24.67■■□□□ 1.54
HDAC1-201ENST00000373548 MPRIPQ6WCQ1 1025 aa24.65■■□□□ 1.54
HDAC1-201ENST00000373548 C1orf141Q5JVX7 400 aa24.65■■□□□ 1.54
HDAC1-201ENST00000373548 ZBTB47Q9UFB7 747 aaPredicted RBP24.65■■□□□ 1.54
HDAC1-201ENST00000373548 ABCC6O95255 1503 aa24.65■■□□□ 1.54
HDAC1-201ENST00000373548 GCC1Q96CN9 775 aa24.64■■□□□ 1.54
HDAC1-201ENST00000373548 OVOS2A0A0G2JMS6 1433 aa24.64■■□□□ 1.54
HDAC1-201ENST00000373548 RNMTO43148 476 aaKnown RBP24.64■■□□□ 1.53
HDAC1-201ENST00000373548 NECTIN2Q92692 538 aa24.64■■□□□ 1.53
HDAC1-201ENST00000373548 ATP10DQ9P241 1426 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms