RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 PRKAR2BP31323 418 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 GSDMDP57764 484 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
PTPRT-204ENST00000373190 CCDC69A6NI79 296 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 GTF2F1P35269 517 aaKnown RBP eCLIP10.29□□□□□ -0.76
PTPRT-204ENST00000373190 NBPF1Q3BBV0 1214 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 CCDC158Q5M9N0 1113 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 NOL7Q9UMY1 257 aaKnown RBP10.29□□□□□ -0.76
PTPRT-204ENST00000373190 CLCN1P35523 988 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 CWC27Q6UX04 472 aaKnown RBP10.29□□□□□ -0.76
PTPRT-204ENST00000373190 CADPSQ9ULU8 1353 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 EFCAB5A4FU69 1503 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 ARHGAP5Q13017 1502 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 EIF5P55010 431 aaKnown RBP10.29□□□□□ -0.76
PTPRT-204ENST00000373190 GPATCH11Q8N954 259 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 CABP2Q9NPB3 220 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 ANO10Q9NW15 660 aa10.29□□□□□ -0.76
PTPRT-204ENST00000373190 LUZP1Q86V48 1076 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 TBC1D2Q9BYX2 928 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 CNKSR2Q8WXI2 1034 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 JPH4Q96JJ6 628 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 ERBINQ96RT1 1412 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 CEP131Q9UPN4 1083 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 HFM1A2PYH4 1435 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 PSME1Q06323 249 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 KRT222Q8N1A0 295 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 TAF4BQ92750 862 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 URI1O94763 535 aaPredicted RBP10.28□□□□□ -0.76
PTPRT-204ENST00000373190 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
PTPRT-204ENST00000373190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTPRT-204ENST00000373190 KIAA1107Q9UPP5 1409 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 USP25Q9UHP3 1055 aa10.28□□□□□ -0.76
PTPRT-204ENST00000373190 SPA17Q15506 151 aa10.27□□□□□ -0.76
PTPRT-204ENST00000373190 CFTRP13569 1480 aa10.27□□□□□ -0.76
PTPRT-204ENST00000373190 STK11IPQ8N1F8 1099 aa10.27□□□□□ -0.76
PTPRT-204ENST00000373190 GOLGA6L9A6NEM1 432 aa10.27□□□□□ -0.77
PTPRT-204ENST00000373190 TTC39AQ5SRH9 613 aa10.27□□□□□ -0.77
PTPRT-204ENST00000373190 WASF1Q92558 559 aa10.27□□□□□ -0.77
PTPRT-204ENST00000373190 ADCY5O95622 1261 aa10.27□□□□□ -0.77
PTPRT-204ENST00000373190 TOP1P11387 765 aaKnown RBP10.27□□□□□ -0.77
PTPRT-204ENST00000373190 MAP4K4O95819 1239 aaPredicted RBP10.27□□□□□ -0.77
PTPRT-204ENST00000373190 MTMR7Q9Y216 660 aa10.27□□□□□ -0.77
PTPRT-204ENST00000373190 KIF4BQ2VIQ3 1234 aa10.27□□□□□ -0.77
PTPRT-204ENST00000373190 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
PTPRT-204ENST00000373190 BMS1Q14692 1282 aaKnown RBP10.27□□□□□ -0.77
PTPRT-204ENST00000373190 CCDC91Q7Z6B0 441 aa10.27□□□□□ -0.77
PTPRT-204ENST00000373190 TRERF1Q96PN7 1200 aa10.27□□□□□ -0.77
PTPRT-204ENST00000373190 CTR9Q6PD62 1173 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 RAPGEF4Q8WZA2 1011 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 GAPVD1Q14C86 1478 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 NACAP1Q9BZK3 213 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 CTNNA3Q9UI47 895 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 FGD5Q6ZNL6 1462 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 CAVIN2O95810 425 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 AACSQ86V21 672 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 SYTL4Q96C24 671 aaPredicted RBP10.26□□□□□ -0.77
PTPRT-204ENST00000373190 IVLP07476 585 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 HDGFL1Q5TGJ6 251 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 LMAN1P49257 510 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 SEPT11Q9NVA2 429 aaKnown RBP10.26□□□□□ -0.77
PTPRT-204ENST00000373190 CEP135Q66GS9 1140 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 CCDC83Q8IWF9 413 aa10.26□□□□□ -0.77
PTPRT-204ENST00000373190 RAI14Q9P0K7 980 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 MNAT1P51948 309 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 STX1AQ16623 288 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 IPO4Q8TEX9 1081 aaKnown RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 TICAM2Q86XR7 235 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 FANCD2Q9BXW9 1451 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 DHX29Q7Z478 1369 aaKnown RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 GCOM1H8Y6P7 765 aaPredicted RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 MYZAPP0CAP1 466 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 TRHP20396 242 aaPredicted RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 GTF2A1P52655 376 aaPredicted RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 IKQ13123 557 aaPredicted RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 ZSCAN25Q6NSZ9 544 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 TRMT1Q9NXH9 659 aaKnown RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 UVSSAQ2YD98 709 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 SSFA2P28290 1259 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 CCDC57Q2TAC2 916 aa10.25□□□□□ -0.77
PTPRT-204ENST00000373190 RNF187Q5TA31 235 aaPredicted RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 SMARCC1Q92922 1105 aaPredicted RBP10.25□□□□□ -0.77
PTPRT-204ENST00000373190 ARAP1Q96P48 1450 aa10.24□□□□□ -0.77
PTPRT-204ENST00000373190 CCDC175P0C221 793 aa10.24□□□□□ -0.77
PTPRT-204ENST00000373190 SLFN5Q08AF3 891 aa10.24□□□□□ -0.77
PTPRT-204ENST00000373190 IFFO1Q0D2I5 559 aa10.24□□□□□ -0.77
PTPRT-204ENST00000373190 GNL3LQ9NVN8 582 aaKnown RBP10.24□□□□□ -0.77
PTPRT-204ENST00000373190 SNW1Q13573 536 aaKnown RBP10.24□□□□□ -0.77
PTPRT-204ENST00000373190 LRPPRCP42704 1394 aaKnown RBP10.24□□□□□ -0.77
PTPRT-204ENST00000373190 ZSCAN23Q3MJ62 389 aa10.24□□□□□ -0.77
PTPRT-204ENST00000373190 GTPBP4Q9BZE4 634 aaKnown RBP10.24□□□□□ -0.77
PTPRT-204ENST00000373190 TMEM57Q8N5G2 664 aa10.24□□□□□ -0.77
PTPRT-204ENST00000373190 PTPRGP23470 1445 aa10.24□□□□□ -0.77
PTPRT-204ENST00000373190 SMC1AQ14683 1233 aaKnown RBP10.24□□□□□ -0.77
PTPRT-204ENST00000373190 KLHL40Q2TBA0 621 aa10.24□□□□□ -0.77
PTPRT-204ENST00000373190 ZHX3Q9H4I2 956 aa10.24□□□□□ -0.77
PTPRT-204ENST00000373190 CCDC171Q6TFL3 1326 aa10.23□□□□□ -0.77
PTPRT-204ENST00000373190 SRGAP3O43295 1099 aa10.23□□□□□ -0.77
PTPRT-204ENST00000373190 CCDC113Q9H0I3 377 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms