RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 INTS3Q68E01 1043 aaKnown RBP19.39■□□□□ 0.69
PABPC4-202ENST00000372857 ABCC4O15439 1325 aa19.39■□□□□ 0.69
PABPC4-202ENST00000372857 SASS6Q6UVJ0 657 aa19.38■□□□□ 0.69
PABPC4-202ENST00000372857 PTCH1Q13635 1447 aa19.38■□□□□ 0.69
PABPC4-202ENST00000372857 SMARCA5O60264 1052 aaPredicted RBP19.38■□□□□ 0.69
PABPC4-202ENST00000372857 ARHGAP45Q92619 1136 aa19.38■□□□□ 0.69
PABPC4-202ENST00000372857 NEXMIFQ5QGS0 1516 aa19.38■□□□□ 0.69
PABPC4-202ENST00000372857 CAMSAP1Q5T5Y3 1602 aa19.38■□□□□ 0.69
PABPC4-202ENST00000372857 BCL11BQ9C0K0 894 aaPredicted RBP19.38■□□□□ 0.69
PABPC4-202ENST00000372857 SDSP20132 328 aa19.37■□□□□ 0.69
PABPC4-202ENST00000372857 DIP2CQ9Y2E4 1556 aa19.37■□□□□ 0.69
PABPC4-202ENST00000372857 PIK3R4Q99570 1358 aa19.37■□□□□ 0.69
PABPC4-202ENST00000372857 FOXD4L6Q3SYB3 417 aaPredicted RBP19.37■□□□□ 0.69
PABPC4-202ENST00000372857 FOXD4L3Q6VB84 417 aaPredicted RBP19.37■□□□□ 0.69
PABPC4-202ENST00000372857 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
PABPC4-202ENST00000372857 ZNF428Q96B54 188 aa19.37■□□□□ 0.69
PABPC4-202ENST00000372857 EMILIN1Q9Y6C2 1016 aa19.37■□□□□ 0.69
PABPC4-202ENST00000372857 MBIPQ9NS73 344 aa19.36■□□□□ 0.69
PABPC4-202ENST00000372857 LRRC7Q96NW7 1537 aa19.36■□□□□ 0.69
PABPC4-202ENST00000372857 FCHSD2O94868 740 aa19.36■□□□□ 0.69
PABPC4-202ENST00000372857 MCM5P33992 734 aa19.35■□□□□ 0.69
PABPC4-202ENST00000372857 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
PABPC4-202ENST00000372857 DNTTIP2Q5QJE6 756 aaKnown RBP19.35■□□□□ 0.69
PABPC4-202ENST00000372857 DCTPP1Q9H773 170 aa19.35■□□□□ 0.69
PABPC4-202ENST00000372857 C8orf58Q8NAV2 365 aa19.35■□□□□ 0.69
PABPC4-202ENST00000372857 TSC1Q92574 1164 aa19.35■□□□□ 0.69
PABPC4-202ENST00000372857 PUS7Q96PZ0 661 aaKnown RBP19.35■□□□□ 0.69
PABPC4-202ENST00000372857 RRS1Q15050 365 aaKnown RBP19.35■□□□□ 0.69
PABPC4-202ENST00000372857 NME9Q86XW9 330 aa19.35■□□□□ 0.69
PABPC4-202ENST00000372857 YTHDC2Q9H6S0 1430 aaKnown RBP19.34■□□□□ 0.69
PABPC4-202ENST00000372857 NOL8Q76FK4 1167 aaKnown RBP19.34■□□□□ 0.69
PABPC4-202ENST00000372857 ARHGEF28Q8N1W1 1705 aaKnown RBP19.34■□□□□ 0.69
PABPC4-202ENST00000372857 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.33■□□□□ 0.69
PABPC4-202ENST00000372857 NFE2L2Q16236 605 aa19.33■□□□□ 0.68
PABPC4-202ENST00000372857 CASC1Q6TDU7 716 aa19.33■□□□□ 0.68
PABPC4-202ENST00000372857 ZHX1Q9UKY1 873 aaPredicted RBP19.33■□□□□ 0.68
PABPC4-202ENST00000372857 DNAJC5Q9H3Z4 198 aa19.33■□□□□ 0.68
PABPC4-202ENST00000372857 KNDC1Q76NI1 1749 aa19.32■□□□□ 0.68
PABPC4-202ENST00000372857 PIK3C2BO00750 1634 aa19.32■□□□□ 0.68
PABPC4-202ENST00000372857 MTERF4Q7Z6M4 381 aaKnown RBP19.32■□□□□ 0.68
PABPC4-202ENST00000372857 ZNF830Q96NB3 372 aaPredicted RBP19.32■□□□□ 0.68
PABPC4-202ENST00000372857 TPRNQ4KMQ1 711 aa19.32■□□□□ 0.68
PABPC4-202ENST00000372857 SMAP1Q8IYB5 467 aaPredicted RBP19.32■□□□□ 0.68
PABPC4-202ENST00000372857 NEK4P51957 841 aa19.31■□□□□ 0.68
PABPC4-202ENST00000372857 GNAI1P63096 354 aa19.31■□□□□ 0.68
PABPC4-202ENST00000372857 KIAA2012Q0VF49 1180 aa19.31■□□□□ 0.68
PABPC4-202ENST00000372857 API5Q9BZZ5 524 aaKnown RBP19.31■□□□□ 0.68
PABPC4-202ENST00000372857 NEO1Q92859 1461 aa19.31■□□□□ 0.68
PABPC4-202ENST00000372857 CFAP44Q96MT7 982 aa19.31■□□□□ 0.68
PABPC4-202ENST00000372857 TSPY26PQ9H489 355 aa19.31■□□□□ 0.68
PABPC4-202ENST00000372857 MYO5BQ9ULV0 1848 aa19.31■□□□□ 0.68
PABPC4-202ENST00000372857 REREQ9P2R6 1566 aa19.31■□□□□ 0.68
PABPC4-202ENST00000372857 GDPD2Q9HCC8 539 aa19.3■□□□□ 0.68
PABPC4-202ENST00000372857 FAM135BQ49AJ0 1406 aa19.3■□□□□ 0.68
PABPC4-202ENST00000372857 MBD3O95983 291 aa19.3■□□□□ 0.68
PABPC4-202ENST00000372857 PDIA4P13667 645 aaKnown RBP19.3■□□□□ 0.68
PABPC4-202ENST00000372857 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
PABPC4-202ENST00000372857 TMX3Q96JJ7 454 aa19.3■□□□□ 0.68
PABPC4-202ENST00000372857 TSPOAP1O95153 1857 aa19.29■□□□□ 0.68
PABPC4-202ENST00000372857 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
PABPC4-202ENST00000372857 FAM83GA6ND36 823 aa19.29■□□□□ 0.68
PABPC4-202ENST00000372857 REC8O95072 547 aa19.29■□□□□ 0.68
PABPC4-202ENST00000372857 POLKQ9UBT6 870 aa19.29■□□□□ 0.68
PABPC4-202ENST00000372857 FAM177BA6PVY3 158 aa19.29■□□□□ 0.68
PABPC4-202ENST00000372857 ESF1Q9H501 851 aaKnown RBP19.29■□□□□ 0.68
PABPC4-202ENST00000372857 IFT57Q9NWB7 429 aa19.29■□□□□ 0.68
PABPC4-202ENST00000372857 C17orf53Q8N3J3 647 aaPredicted RBP19.28■□□□□ 0.68
PABPC4-202ENST00000372857 PTPRMP28827 1452 aa19.27■□□□□ 0.68
PABPC4-202ENST00000372857 ERC2O15083 957 aa19.27■□□□□ 0.68
PABPC4-202ENST00000372857 ANKRD44Q8N8A2 993 aa19.27■□□□□ 0.68
PABPC4-202ENST00000372857 CCDC94Q9BW85 323 aaPredicted RBP19.27■□□□□ 0.67
PABPC4-202ENST00000372857 GADD45BO75293 160 aaPredicted RBP19.26■□□□□ 0.67
PABPC4-202ENST00000372857 KRT24Q2M2I5 525 aa19.26■□□□□ 0.67
PABPC4-202ENST00000372857 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
PABPC4-202ENST00000372857 ZNF853P0CG23 659 aa19.25■□□□□ 0.67
PABPC4-202ENST00000372857 CEP85Q6P2H3 762 aa19.25■□□□□ 0.67
PABPC4-202ENST00000372857 MYRIPQ8NFW9 859 aa19.25■□□□□ 0.67
PABPC4-202ENST00000372857 TSHZ3Q63HK5 1081 aa19.25■□□□□ 0.67
PABPC4-202ENST00000372857 BRD1O95696 1058 aa19.25■□□□□ 0.67
PABPC4-202ENST00000372857 USP25Q9UHP3 1055 aa19.25■□□□□ 0.67
PABPC4-202ENST00000372857 TTC12Q9H892 705 aaPredicted RBP19.24■□□□□ 0.67
PABPC4-202ENST00000372857 ATP10DQ9P241 1426 aa19.24■□□□□ 0.67
PABPC4-202ENST00000372857 ANKRD26Q9UPS8 1709 aa19.23■□□□□ 0.67
PABPC4-202ENST00000372857 ZNF710Q8N1W2 664 aa19.23■□□□□ 0.67
PABPC4-202ENST00000372857 MEIS3Q99687 375 aa19.22■□□□□ 0.67
PABPC4-202ENST00000372857 METP08581 1390 aa19.22■□□□□ 0.67
PABPC4-202ENST00000372857 CBX1P83916 185 aa19.22■□□□□ 0.67
PABPC4-202ENST00000372857 CEBPAP49715 358 aaPredicted RBP19.22■□□□□ 0.67
PABPC4-202ENST00000372857 SYAP1Q96A49 352 aaPredicted RBP19.22■□□□□ 0.67
PABPC4-202ENST00000372857 PALD1Q9ULE6 856 aa19.22■□□□□ 0.67
PABPC4-202ENST00000372857 NOLC1Q14978 699 aaKnown RBP eCLIP19.21■□□□□ 0.673e-88■■□□□ 14.4
PABPC4-202ENST00000372857 MSH6P52701 1360 aa19.21■□□□□ 0.67
PABPC4-202ENST00000372857 RPAP2Q8IXW5 612 aaPredicted RBP19.21■□□□□ 0.67
PABPC4-202ENST00000372857 NUDT16Q96DE0 195 aaKnown RBP19.2■□□□□ 0.66
PABPC4-202ENST00000372857 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
PABPC4-202ENST00000372857 RIMBP3CA6NJZ7 1639 aa19.2■□□□□ 0.66
PABPC4-202ENST00000372857 RIMBP3BA6NNM3 1639 aa19.2■□□□□ 0.66
PABPC4-202ENST00000372857 RIMBP3Q9UFD9 1639 aa19.2■□□□□ 0.66
PABPC4-202ENST00000372857 RICTORQ6R327 1708 aa19.2■□□□□ 0.66
PABPC4-202ENST00000372857 USP48Q86UV5 1035 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms