RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 FAM135BQ49AJ0 1406 aa9.03□□□□□ -0.96
USP1-202ENST00000371146 TNS3Q68CZ2 1445 aa9.03□□□□□ -0.96
USP1-202ENST00000371146 GNAT3A8MTJ3 354 aa9.03□□□□□ -0.96
USP1-202ENST00000371146 KCNQ3O43525 872 aa9.03□□□□□ -0.96
USP1-202ENST00000371146 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
USP1-202ENST00000371146 FBXW7Q969H0 707 aa9.03□□□□□ -0.96
USP1-202ENST00000371146 PLIN1O60240 522 aa9.02□□□□□ -0.96
USP1-202ENST00000371146 GAS2L2Q8NHY3 880 aa9.02□□□□□ -0.96
USP1-202ENST00000371146 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.96
USP1-202ENST00000371146 STK31Q9BXU1 1019 aa9.02□□□□□ -0.96
USP1-202ENST00000371146 ZPR1O75312 459 aa9.02□□□□□ -0.97
USP1-202ENST00000371146 GPR162Q16538 588 aa9.02□□□□□ -0.97
USP1-202ENST00000371146 A1BGP04217 495 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 VPS72Q15906 364 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 DNAJC10Q8IXB1 793 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 ZNF622Q969S3 477 aaKnown RBP eCLIP9.01□□□□□ -0.973e-7■■□□□ 13.6
USP1-202ENST00000371146 CARD10Q9BWT7 1032 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 TECPR2O15040 1411 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 UBR1Q8IWV7 1749 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 SLIT1O75093 1534 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 G3V3G9 751 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 DCAF8Q5TAQ9 597 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 REREQ9P2R6 1566 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 FLT4P35916 1363 aa9.01□□□□□ -0.97
USP1-202ENST00000371146 ATP5J2-PTCD1G3V325 749 aa9□□□□□ -0.97
USP1-202ENST00000371146 FKBP5Q13451 457 aaPredicted RBP9□□□□□ -0.97
USP1-202ENST00000371146 RIC3Q7Z5B4 369 aa9□□□□□ -0.97
USP1-202ENST00000371146 RALGAPBQ86X10 1494 aa9□□□□□ -0.97
USP1-202ENST00000371146 MROH2AA6NES4 1674 aa9□□□□□ -0.97
USP1-202ENST00000371146 CYP27B1O15528 508 aa9□□□□□ -0.97
USP1-202ENST00000371146 RBM10P98175 930 aaKnown RBP9□□□□□ -0.97
USP1-202ENST00000371146 PRAMEF22A3QJZ6 481 aa9□□□□□ -0.97
USP1-202ENST00000371146 TXNRD1Q16881 649 aa9□□□□□ -0.97
USP1-202ENST00000371146 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
USP1-202ENST00000371146 PDGFDQ9GZP0 370 aaPredicted RBP9□□□□□ -0.97
USP1-202ENST00000371146 SPATA31A1Q5TZJ5 1347 aa8.99□□□□□ -0.97
USP1-202ENST00000371146 CPS1P31327 1500 aa8.99□□□□□ -0.97
USP1-202ENST00000371146 SBNO2Q9Y2G9 1366 aa8.99□□□□□ -0.97
USP1-202ENST00000371146 PER1O15534 1290 aaPredicted RBP8.99□□□□□ -0.97
USP1-202ENST00000371146 UTRNP46939 3433 aa8.99□□□□□ -0.97
USP1-202ENST00000371146 RUNDC1Q96C34 613 aa8.98□□□□□ -0.97
USP1-202ENST00000371146 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
USP1-202ENST00000371146 SUPT16HQ9Y5B9 1047 aaKnown RBP8.98□□□□□ -0.97
USP1-202ENST00000371146 GRM1Q13255 1194 aa8.98□□□□□ -0.97
USP1-202ENST00000371146 FTSJ3Q8IY81 847 aaKnown RBP8.98□□□□□ -0.97
USP1-202ENST00000371146 PIGBQ92521 554 aa8.98□□□□□ -0.97
USP1-202ENST00000371146 SMC4Q9NTJ3 1288 aa8.98□□□□□ -0.97
USP1-202ENST00000371146 RTCBQ9Y3I0 505 aaKnown RBP8.98□□□□□ -0.97
USP1-202ENST00000371146 EDC4Q6P2E9 1401 aaKnown RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 TMPOP42166 694 aaKnown RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 GOLGA2Q08379 1002 aa8.97□□□□□ -0.97
USP1-202ENST00000371146 AMOTQ4VCS5 1084 aa8.97□□□□□ -0.97
USP1-202ENST00000371146 CHMP4AQ9BY43 222 aa8.97□□□□□ -0.97
USP1-202ENST00000371146 TMX4Q9H1E5 349 aaPredicted RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 EP400Q96L91 3159 aa8.97□□□□□ -0.97
USP1-202ENST00000371146 SPATA31A5Q5VU36 1347 aa8.97□□□□□ -0.97
USP1-202ENST00000371146 SPATA31A7Q8IWB4 1347 aa8.97□□□□□ -0.97
USP1-202ENST00000371146 VWDEQ8N2E2 1590 aa8.97□□□□□ -0.97
USP1-202ENST00000371146 STARD3NLO95772 234 aa8.97□□□□□ -0.97
USP1-202ENST00000371146 HSP90AB1P08238 724 aaKnown RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 FNBP4Q8N3X1 1017 aaPredicted RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 NKTRP30414 1462 aaKnown RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 OS9Q13438 667 aaPredicted RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 ZNF496Q96IT1 587 aaPredicted RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 SRP68Q9UHB9 627 aaKnown RBP8.97□□□□□ -0.97
USP1-202ENST00000371146 PTCH1Q13635 1447 aa8.96□□□□□ -0.97
USP1-202ENST00000371146 MED14O60244 1454 aa8.96□□□□□ -0.97
USP1-202ENST00000371146 LOC102724428A0A0B4J2F2 783 aa8.96□□□□□ -0.97
USP1-202ENST00000371146 FRAT2O75474 233 aaPredicted RBP8.96□□□□□ -0.97
USP1-202ENST00000371146 POLD1P28340 1107 aa8.96□□□□□ -0.97
USP1-202ENST00000371146 SIK1P57059 783 aa8.96□□□□□ -0.97
USP1-202ENST00000371146 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.97
USP1-202ENST00000371146 TAOK2Q9UL54 1235 aa8.96□□□□□ -0.97
USP1-202ENST00000371146 BCS1LQ9Y276 419 aa8.96□□□□□ -0.97
USP1-202ENST00000371146 DIP2AQ14689 1571 aa8.96□□□□□ -0.97
USP1-202ENST00000371146 ZC3H13Q5T200 1668 aaKnown RBP8.96□□□□□ -0.97
USP1-202ENST00000371146 MYOM2P54296 1465 aa8.96□□□□□ -0.97
USP1-202ENST00000371146 IL13P35225 146 aa8.96□□□□□ -0.98
USP1-202ENST00000371146 EXOSC9Q06265 439 aaKnown RBP8.96□□□□□ -0.98
USP1-202ENST00000371146 USP16Q9Y5T5 823 aa8.96□□□□□ -0.98
USP1-202ENST00000371146 ASXL1Q8IXJ9 1541 aa8.96□□□□□ -0.98
USP1-202ENST00000371146 NEURL4Q96JN8 1562 aa8.96□□□□□ -0.98
USP1-202ENST00000371146 A0A0U1RQG5 324 aaPredicted RBP8.96□□□□□ -0.98
USP1-202ENST00000371146 SLC4A2P04920 1241 aa8.96□□□□□ -0.98
USP1-202ENST00000371146 TRAPPC3LQ5T215 181 aa8.96□□□□□ -0.98
USP1-202ENST00000371146 PCDH11XQ9BZA7 1347 aa8.96□□□□□ -0.98
USP1-202ENST00000371146 PCDH11YQ9BZA8 1340 aa8.96□□□□□ -0.98
USP1-202ENST00000371146 SBNO1A3KN83 1393 aa8.96□□□□□ -0.98
USP1-202ENST00000371146 FCHSD2O94868 740 aa8.95□□□□□ -0.98
USP1-202ENST00000371146 PHKG2P15735 406 aa8.95□□□□□ -0.98
USP1-202ENST00000371146 F6X3S4 739 aa8.95□□□□□ -0.98
USP1-202ENST00000371146 STRCQ7RTU9 1775 aa8.95□□□□□ -0.98
USP1-202ENST00000371146 ATP7BP35670 1465 aa8.95□□□□□ -0.98
USP1-202ENST00000371146 LMOD3Q0VAK6 560 aa8.94□□□□□ -0.98
USP1-202ENST00000371146 TAF7Q15545 349 aaPredicted RBP8.94□□□□□ -0.98
USP1-202ENST00000371146 NFE2L2Q16236 605 aa8.94□□□□□ -0.98
USP1-202ENST00000371146 DCAF5Q96JK2 942 aa8.94□□□□□ -0.98
USP1-202ENST00000371146 RNMTO43148 476 aaKnown RBP8.94□□□□□ -0.98
USP1-202ENST00000371146 NUTM1Q86Y26 1132 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms