RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 MCTP1Q6DN14 999 aa21.67■■□□□ 1.06
CHUK-201ENST00000370397 ZGPATQ8N5A5 531 aaKnown RBP21.67■■□□□ 1.06
CHUK-201ENST00000370397 RGPD1P0DJD0 1748 aa21.67■■□□□ 1.06
CHUK-201ENST00000370397 PRIM1P49642 420 aaKnown RBP21.67■■□□□ 1.06
CHUK-201ENST00000370397 CFAP44Q96MT7 982 aa21.67■■□□□ 1.06
CHUK-201ENST00000370397 TWISTNBQ3B726 338 aaPredicted RBP21.67■■□□□ 1.06
CHUK-201ENST00000370397 NUCB2P80303 420 aa21.66■■□□□ 1.06
CHUK-201ENST00000370397 CDK19Q9BWU1 502 aa21.66■■□□□ 1.06
CHUK-201ENST00000370397 CAVIN1Q6NZI2 390 aaKnown RBP21.66■■□□□ 1.06
CHUK-201ENST00000370397 NSFL1CQ9UNZ2 370 aaKnown RBP21.66■■□□□ 1.06
CHUK-201ENST00000370397 HMOX1P09601 288 aa21.65■■□□□ 1.06
CHUK-201ENST00000370397 GOLGA6L22H0YM25 854 aa21.65■■□□□ 1.06
CHUK-201ENST00000370397 NRXN3Q9Y4C0 1643 aa21.65■■□□□ 1.06
CHUK-201ENST00000370397 ANKRD44Q8N8A2 993 aa21.65■■□□□ 1.06
CHUK-201ENST00000370397 AATKQ6ZMQ8 1374 aa21.64■■□□□ 1.06
CHUK-201ENST00000370397 SDSP20132 328 aa21.64■■□□□ 1.05
CHUK-201ENST00000370397 CHAMP1Q96JM3 812 aa21.64■■□□□ 1.05
CHUK-201ENST00000370397 CPS1P31327 1500 aa21.64■■□□□ 1.05
CHUK-201ENST00000370397 TMEM63CQ9P1W3 806 aa21.63■■□□□ 1.05
CHUK-201ENST00000370397 ELL2O00472 640 aaPredicted RBP21.63■■□□□ 1.05
CHUK-201ENST00000370397 RTL1A6NKG5 1358 aa21.63■■□□□ 1.05
CHUK-201ENST00000370397 EMILIN1Q9Y6C2 1016 aa21.63■■□□□ 1.05
CHUK-201ENST00000370397 N4BP2Q86UW6 1770 aaPredicted RBP21.63■■□□□ 1.05
CHUK-201ENST00000370397 CWC22Q9HCG8 908 aaKnown RBP21.62■■□□□ 1.05
CHUK-201ENST00000370397 CEP85Q6P2H3 762 aa21.62■■□□□ 1.05
CHUK-201ENST00000370397 HDGFL2Q7Z4V5 671 aaPredicted RBP21.62■■□□□ 1.05
CHUK-201ENST00000370397 API5Q9BZZ5 524 aaKnown RBP21.62■■□□□ 1.05
CHUK-201ENST00000370397 SLC52A1Q9NWF4 448 aa21.62■■□□□ 1.05
CHUK-201ENST00000370397 RBM27Q9P2N5 1060 aaKnown RBP21.62■■□□□ 1.05
CHUK-201ENST00000370397 CALD1Q05682 793 aaKnown RBP21.61■■□□□ 1.05
CHUK-201ENST00000370397 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.61■■□□□ 1.05
CHUK-201ENST00000370397 FAM83GA6ND36 823 aa21.6■■□□□ 1.05
CHUK-201ENST00000370397 EDC4Q6P2E9 1401 aaKnown RBP21.6■■□□□ 1.05
CHUK-201ENST00000370397 MSH6P52701 1360 aa21.6■■□□□ 1.05
CHUK-201ENST00000370397 NALCNQ8IZF0 1738 aa21.58■■□□□ 1.05
CHUK-201ENST00000370397 PEAK1Q9H792 1746 aa21.58■■□□□ 1.05
CHUK-201ENST00000370397 SALL3Q9BXA9 1300 aa21.58■■□□□ 1.05
CHUK-201ENST00000370397 LRSAM1Q6UWE0 723 aa21.58■■□□□ 1.04
CHUK-201ENST00000370397 TCHHQ07283 1943 aa21.58■■□□□ 1.04
CHUK-201ENST00000370397 ZKSCAN5Q9Y2L8 839 aa21.57■■□□□ 1.04
CHUK-201ENST00000370397 ITSN1Q15811 1721 aa21.57■■□□□ 1.04
CHUK-201ENST00000370397 PRPF40AO75400 957 aaKnown RBP21.57■■□□□ 1.04
CHUK-201ENST00000370397 IL17RAQ96F46 866 aa21.57■■□□□ 1.04
CHUK-201ENST00000370397 OSBPL3Q9H4L5 887 aa21.56■■□□□ 1.04
CHUK-201ENST00000370397 XRN1Q8IZH2 1706 aaKnown RBP21.56■■□□□ 1.04
CHUK-201ENST00000370397 KIAA0232Q92628 1395 aa21.56■■□□□ 1.04
CHUK-201ENST00000370397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.56■■□□□ 1.04
CHUK-201ENST00000370397 MSNP26038 577 aaKnown RBP21.55■■□□□ 1.04
CHUK-201ENST00000370397 SMARCA5O60264 1052 aaPredicted RBP21.55■■□□□ 1.04
CHUK-201ENST00000370397 RPAP2Q8IXW5 612 aaPredicted RBP21.55■■□□□ 1.04
CHUK-201ENST00000370397 RAPGEF3O95398 923 aa21.54■■□□□ 1.04
CHUK-201ENST00000370397 KRT24Q2M2I5 525 aa21.54■■□□□ 1.04
CHUK-201ENST00000370397 ZRANB1Q9UGI0 708 aa21.54■■□□□ 1.04
CHUK-201ENST00000370397 XPCQ01831 940 aaPredicted RBP21.54■■□□□ 1.04
CHUK-201ENST00000370397 DCTN1Q14203 1278 aa21.54■■□□□ 1.04
CHUK-201ENST00000370397 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
CHUK-201ENST00000370397 CUL4AQ13619 759 aa21.53■■□□□ 1.04
CHUK-201ENST00000370397 BRD1O95696 1058 aa21.52■■□□□ 1.04
CHUK-201ENST00000370397 FAM208AQ9UK61 1670 aaKnown RBP21.52■■□□□ 1.04
CHUK-201ENST00000370397 MCM5P33992 734 aa21.52■■□□□ 1.04
CHUK-201ENST00000370397 NME9Q86XW9 330 aa21.52■■□□□ 1.03
CHUK-201ENST00000370397 MEIS3Q99687 375 aa21.51■■□□□ 1.03
CHUK-201ENST00000370397 SYCE3A1L190 88 aa21.51■■□□□ 1.03
CHUK-201ENST00000370397 PRDM4Q9UKN5 801 aa21.51■■□□□ 1.03
CHUK-201ENST00000370397 CRB1P82279 1406 aa21.51■■□□□ 1.03
CHUK-201ENST00000370397 CHL1O00533 1208 aa21.5■■□□□ 1.03
CHUK-201ENST00000370397 R3HCC1Q9Y3T6 440 aaKnown RBP21.5■■□□□ 1.03
CHUK-201ENST00000370397 ST18O60284 1047 aa21.5■■□□□ 1.03
CHUK-201ENST00000370397 ANP32BQ92688 251 aaKnown RBP21.5■■□□□ 1.03
CHUK-201ENST00000370397 RIMS1Q86UR5 1692 aaKnown RBP21.5■■□□□ 1.03
CHUK-201ENST00000370397 TOPAZ1Q8N9V7 1692 aa21.5■■□□□ 1.03
CHUK-201ENST00000370397 TMX3Q96JJ7 454 aa21.49■■□□□ 1.03
CHUK-201ENST00000370397 LRRC37A3O60309 1634 aa21.49■■□□□ 1.03
CHUK-201ENST00000370397 RBM10P98175 930 aaKnown RBP21.49■■□□□ 1.03
CHUK-201ENST00000370397 LMOD3Q0VAK6 560 aa21.49■■□□□ 1.03
CHUK-201ENST00000370397 WAPLQ7Z5K2 1190 aa21.49■■□□□ 1.03
CHUK-201ENST00000370397 A2ML1A8K2U0 1454 aa21.48■■□□□ 1.03
CHUK-201ENST00000370397 CRYBG1Q9Y4K1 1723 aa21.48■■□□□ 1.03
CHUK-201ENST00000370397 ERC2O15083 957 aa21.48■■□□□ 1.03
CHUK-201ENST00000370397 FMN2Q9NZ56 1722 aa21.48■■□□□ 1.03
CHUK-201ENST00000370397 NCLP19338 710 aaKnown RBP21.47■■□□□ 1.03
CHUK-201ENST00000370397 PTPRCP08575 1304 aa21.47■■□□□ 1.03
CHUK-201ENST00000370397 SPATA31D1Q6ZQQ2 1576 aa21.47■■□□□ 1.03
CHUK-201ENST00000370397 PDE1AP54750 535 aa21.46■■□□□ 1.03
CHUK-201ENST00000370397 PALD1Q9ULE6 856 aa21.46■■□□□ 1.03
CHUK-201ENST00000370397 REC8O95072 547 aa21.46■■□□□ 1.03
CHUK-201ENST00000370397 UQCRHLA0A096LP55 91 aa21.45■■□□□ 1.02
CHUK-201ENST00000370397 UQCRHP07919 91 aa21.45■■□□□ 1.02
CHUK-201ENST00000370397 RRS1Q15050 365 aaKnown RBP21.44■■□□□ 1.02
CHUK-201ENST00000370397 AEBP1Q8IUX7 1158 aa21.44■■□□□ 1.02
CHUK-201ENST00000370397 AGLP35573 1532 aa21.44■■□□□ 1.02
CHUK-201ENST00000370397 FBXO31Q5XUX0 539 aaPredicted RBP21.43■■□□□ 1.02
CHUK-201ENST00000370397 DYNC1I1O14576 645 aa21.42■■□□□ 1.02
CHUK-201ENST00000370397 INTS4Q96HW7 963 aaKnown RBP21.42■■□□□ 1.02
CHUK-201ENST00000370397 CCDC39Q9UFE4 941 aa21.42■■□□□ 1.02
CHUK-201ENST00000370397 MBD3O95983 291 aa21.42■■□□□ 1.02
CHUK-201ENST00000370397 ESYT1Q9BSJ8 1104 aa21.41■■□□□ 1.02
CHUK-201ENST00000370397 CACNA1FO60840 1977 aa21.41■■□□□ 1.02
CHUK-201ENST00000370397 MAP7D2Q96T17 732 aa21.41■■□□□ 1.02
CHUK-201ENST00000370397 RPAP1Q9BWH6 1393 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms