RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 EIF4A2Q14240 407 aaKnown RBP17.84■□□□□ 0.45
USF1-202ENST00000368020 PIP4K2BP78356 416 aa17.83■□□□□ 0.44
USF1-202ENST00000368020 NUTM2GQ5VZR2 741 aa17.83■□□□□ 0.44
USF1-202ENST00000368020 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.44
USF1-202ENST00000368020 SLIT3O75094 1523 aa17.82■□□□□ 0.44
USF1-202ENST00000368020 MED1Q15648 1581 aaPredicted RBP17.82■□□□□ 0.44
USF1-202ENST00000368020 NOB1Q9ULX3 412 aaKnown RBP17.81■□□□□ 0.44
USF1-202ENST00000368020 GCP02774 474 aa17.81■□□□□ 0.44
USF1-202ENST00000368020 RGS3P49796 1198 aa17.81■□□□□ 0.44
USF1-202ENST00000368020 HDAC1Q13547 482 aaPredicted RBP17.8■□□□□ 0.44
USF1-202ENST00000368020 C8orf34Q49A92 452 aa17.8■□□□□ 0.44
USF1-202ENST00000368020 ITPRIPQ8IWB1 547 aa17.8■□□□□ 0.44
USF1-202ENST00000368020 PCDHB15Q9Y5E8 787 aa17.8■□□□□ 0.44
USF1-202ENST00000368020 NFAT5O94916 1531 aa17.79■□□□□ 0.44
USF1-202ENST00000368020 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
USF1-202ENST00000368020 PHLPP1O60346 1717 aa17.79■□□□□ 0.44
USF1-202ENST00000368020 COL16A1Q07092 1604 aaPredicted RBP17.79■□□□□ 0.44
USF1-202ENST00000368020 SULT6B1Q6IMI4 303 aa17.78■□□□□ 0.44
USF1-202ENST00000368020 NPM2Q86SE8 214 aaKnown RBP17.78■□□□□ 0.44
USF1-202ENST00000368020 MBIPQ9NS73 344 aa17.78■□□□□ 0.44
USF1-202ENST00000368020 KDRP35968 1356 aa17.78■□□□□ 0.44
USF1-202ENST00000368020 VAMP4O75379 141 aa17.78■□□□□ 0.44
USF1-202ENST00000368020 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
USF1-202ENST00000368020 TNNQ9UQP3 1299 aa17.77■□□□□ 0.44
USF1-202ENST00000368020 CRYBG1Q9Y4K1 1723 aa17.77■□□□□ 0.43
USF1-202ENST00000368020 RTL1A6NKG5 1358 aa17.76■□□□□ 0.43
USF1-202ENST00000368020 KIAA0232Q92628 1395 aa17.76■□□□□ 0.43
USF1-202ENST00000368020 TWISTNBQ3B726 338 aaPredicted RBP17.75■□□□□ 0.43
USF1-202ENST00000368020 SKAP1Q86WV1 359 aa17.75■□□□□ 0.43
USF1-202ENST00000368020 PHRF1Q9P1Y6 1649 aaKnown RBP17.75■□□□□ 0.43
USF1-202ENST00000368020 AMPHP49418 695 aa17.75■□□□□ 0.43
USF1-202ENST00000368020 HSP90AB2PQ58FF8 381 aa17.75■□□□□ 0.43
USF1-202ENST00000368020 ARHGEF25Q86VW2 580 aa17.75■□□□□ 0.43
USF1-202ENST00000368020 ZBTB40Q9NUA8 1239 aa17.75■□□□□ 0.43
USF1-202ENST00000368020 COL22A1Q8NFW1 1626 aaPredicted RBP17.75■□□□□ 0.43
USF1-202ENST00000368020 SOX12O15370 315 aa17.74■□□□□ 0.43
USF1-202ENST00000368020 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
USF1-202ENST00000368020 MRPL50Q8N5N7 158 aaKnown RBP17.74■□□□□ 0.43
USF1-202ENST00000368020 API5Q9BZZ5 524 aaKnown RBP17.74■□□□□ 0.43
USF1-202ENST00000368020 CPDO75976 1380 aa17.74■□□□□ 0.43
USF1-202ENST00000368020 IGSF1Q8N6C5 1336 aa17.73■□□□□ 0.43
USF1-202ENST00000368020 HTATSF1O43719 755 aaKnown RBP17.72■□□□□ 0.43
USF1-202ENST00000368020 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
USF1-202ENST00000368020 FBXO41Q8TF61 875 aa17.72■□□□□ 0.43
USF1-202ENST00000368020 THUMPD2Q9BTF0 503 aaKnown RBP17.72■□□□□ 0.43
USF1-202ENST00000368020 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
USF1-202ENST00000368020 LTN1O94822 1766 aa17.72■□□□□ 0.43
USF1-202ENST00000368020 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
USF1-202ENST00000368020 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
USF1-202ENST00000368020 IP6K1Q92551 441 aa17.72■□□□□ 0.43
USF1-202ENST00000368020 ABCC4O15439 1325 aa17.71■□□□□ 0.43
USF1-202ENST00000368020 CHL1O00533 1208 aa17.71■□□□□ 0.43
USF1-202ENST00000368020 ABCC6O95255 1503 aa17.7■□□□□ 0.42
USF1-202ENST00000368020 HOXC9P31274 260 aa17.7■□□□□ 0.42
USF1-202ENST00000368020 SMC5Q8IY18 1101 aa17.7■□□□□ 0.42
USF1-202ENST00000368020 RTF1Q92541 710 aaKnown RBP17.7■□□□□ 0.42
USF1-202ENST00000368020 DAXXQ9UER7 740 aaPredicted RBP17.7■□□□□ 0.42
USF1-202ENST00000368020 ABCA3Q99758 1704 aa17.7■□□□□ 0.42
USF1-202ENST00000368020 LRRC37A3O60309 1634 aa17.69■□□□□ 0.42
USF1-202ENST00000368020 UPF2Q9HAU5 1272 aaKnown RBP17.69■□□□□ 0.42
USF1-202ENST00000368020 JCADQ9P266 1359 aa17.68■□□□□ 0.42
USF1-202ENST00000368020 FAM83GA6ND36 823 aa17.68■□□□□ 0.42
USF1-202ENST00000368020 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
USF1-202ENST00000368020 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
USF1-202ENST00000368020 CRB1P82279 1406 aa17.68■□□□□ 0.42
USF1-202ENST00000368020 SOS1Q07889 1333 aaPredicted RBP17.67■□□□□ 0.42
USF1-202ENST00000368020 CACNA1FO60840 1977 aa17.67■□□□□ 0.42
USF1-202ENST00000368020 C8orf58Q8NAV2 365 aa17.67■□□□□ 0.42
USF1-202ENST00000368020 PTPRCP08575 1304 aa17.67■□□□□ 0.42
USF1-202ENST00000368020 PLEKHG5O94827 1062 aa17.66■□□□□ 0.42
USF1-202ENST00000368020 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
USF1-202ENST00000368020 COL18A1P39060 1754 aa17.65■□□□□ 0.42
USF1-202ENST00000368020 ZBTB7BO15156 539 aaPredicted RBP17.65■□□□□ 0.42
USF1-202ENST00000368020 EYA1Q99502 592 aa17.65■□□□□ 0.42
USF1-202ENST00000368020 BABAM1Q9NWV8 329 aa17.65■□□□□ 0.42
USF1-202ENST00000368020 HSPA1LP34931 641 aa17.64■□□□□ 0.41
USF1-202ENST00000368020 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
USF1-202ENST00000368020 PRDM11Q9NQV5 511 aa17.64■□□□□ 0.41
USF1-202ENST00000368020 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
USF1-202ENST00000368020 ELL2O00472 640 aaPredicted RBP17.62■□□□□ 0.41
USF1-202ENST00000368020 NUCB1Q02818 461 aa17.62■□□□□ 0.41
USF1-202ENST00000368020 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
USF1-202ENST00000368020 MCM10Q7L590 875 aa17.62■□□□□ 0.41
USF1-202ENST00000368020 AXIN2Q9Y2T1 843 aa17.62■□□□□ 0.41
USF1-202ENST00000368020 INTS3Q68E01 1043 aaKnown RBP17.61■□□□□ 0.41
USF1-202ENST00000368020 ZBTB7CA1YPR0 619 aa17.61■□□□□ 0.41
USF1-202ENST00000368020 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
USF1-202ENST00000368020 USP35Q9P2H5 1018 aa17.61■□□□□ 0.41
USF1-202ENST00000368020 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
USF1-202ENST00000368020 ERBB3P21860 1342 aa17.6■□□□□ 0.41
USF1-202ENST00000368020 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
USF1-202ENST00000368020 CHRNA2Q15822 529 aa17.6■□□□□ 0.41
USF1-202ENST00000368020 TSPYL4Q9UJ04 414 aa17.6■□□□□ 0.41
USF1-202ENST00000368020 RGPD5Q99666 1765 aa17.59■□□□□ 0.41
USF1-202ENST00000368020 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
USF1-202ENST00000368020 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
USF1-202ENST00000368020 COL14A1Q05707 1796 aaKnown RBP17.58■□□□□ 0.41
USF1-202ENST00000368020 EIF5BO60841 1220 aaKnown RBP17.58■□□□□ 0.41
USF1-202ENST00000368020 BECN1Q14457 450 aa17.58■□□□□ 0.41
USF1-202ENST00000368020 ANKRD24Q8TF21 1146 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms