RNA–Protein interactions for RNA: ENST00000366997.8

LPGAT1-202, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPGAT1, Length 7,782 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-202ENST00000366997 UBXN4Q92575 508 aa13.9□□□□□ -0.18
LPGAT1-202ENST00000366997 ZSCAN31Q96LW9 406 aaPredicted RBP13.9□□□□□ -0.18
LPGAT1-202ENST00000366997 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
LPGAT1-202ENST00000366997 NLRP2Q9NX02 1062 aa13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 TAF3Q5VWG9 929 aa13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 DACH1Q9UI36 760 aa13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 CCDC181Q5TID7 509 aa13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 DDX54Q8TDD1 881 aaKnown RBP13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 C16orf45Q96MC5 204 aaPredicted RBP13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 MYO6Q9UM54 1294 aa13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 CCDC43Q96MW1 224 aaKnown RBP13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 MYL6BP14649 208 aa13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 TBC1D32Q96NH3 1257 aa13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
LPGAT1-202ENST00000366997 GOLGA6L10A6NI86 522 aa13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 PANK2Q9BZ23 570 aa13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 DEF6Q9H4E7 631 aa13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 FAM177BA6PVY3 158 aa13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 CFAP100Q494V2 611 aa13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 CDK5RAP3Q96JB5 506 aa13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 CCDC158Q5M9N0 1113 aa13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 BAG4O95429 457 aaKnown RBP13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 ADCY5O95622 1261 aa13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 TMCO3Q6UWJ1 677 aa13.88□□□□□ -0.19
LPGAT1-202ENST00000366997 TNNT1P13805 278 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 TBC1D9Q6ZT07 1266 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 RPAP2Q8IXW5 612 aaPredicted RBP13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 FKBP4Q02790 459 aaKnown RBP eCLIP13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 TRERF1Q96PN7 1200 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 CLIP2Q9UDT6 1046 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 SMTNL1A8MU46 457 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 POLR3GO15318 223 aaPredicted RBP13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 TXNDC2Q86VQ3 553 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 KIF18AQ8NI77 898 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 LRRFIP2Q9Y608 721 aaKnown RBP13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 ANKRD30BQ9BXX2 1392 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 CKAP2LQ8IYA6 745 aa13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
LPGAT1-202ENST00000366997 TMX1Q9H3N1 280 aa13.86□□□□□ -0.19
LPGAT1-202ENST00000366997 CTDP1Q9Y5B0 961 aaPredicted RBP13.86□□□□□ -0.19
LPGAT1-202ENST00000366997 FCHSD2O94868 740 aa13.86□□□□□ -0.19
LPGAT1-202ENST00000366997 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
LPGAT1-202ENST00000366997 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
LPGAT1-202ENST00000366997 TRIM27P14373 513 aa13.86□□□□□ -0.19
LPGAT1-202ENST00000366997 MX1P20591 662 aa13.85□□□□□ -0.19
LPGAT1-202ENST00000366997 CASQ1P31415 396 aa13.85□□□□□ -0.19
LPGAT1-202ENST00000366997 NUP133Q8WUM0 1156 aa13.85□□□□□ -0.19
LPGAT1-202ENST00000366997 XRCC6P12956 609 aaKnown RBP eCLIP13.85□□□□□ -0.19
LPGAT1-202ENST00000366997 PLEKHO1Q53GL0 409 aaPredicted RBP13.85□□□□□ -0.19
LPGAT1-202ENST00000366997 CNNM1Q9NRU3 951 aa13.85□□□□□ -0.19
LPGAT1-202ENST00000366997 PIP4K2AP48426 406 aaPredicted RBP13.85□□□□□ -0.19
LPGAT1-202ENST00000366997 PRPF40BQ6NWY9 871 aaKnown RBP13.85□□□□□ -0.19
LPGAT1-202ENST00000366997 TRIM22Q8IYM9 498 aa13.85□□□□□ -0.19
LPGAT1-202ENST00000366997 ZNF830Q96NB3 372 aaPredicted RBP13.84□□□□□ -0.19
LPGAT1-202ENST00000366997 URI1O94763 535 aaPredicted RBP13.84□□□□□ -0.19
LPGAT1-202ENST00000366997 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.84□□□□□ -0.19
LPGAT1-202ENST00000366997 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
LPGAT1-202ENST00000366997 RBM33Q96EV2 1170 aaKnown RBP13.84□□□□□ -0.19
LPGAT1-202ENST00000366997 DYNC1I1O14576 645 aa13.84□□□□□ -0.19
LPGAT1-202ENST00000366997 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
LPGAT1-202ENST00000366997 STIM1Q13586 685 aa13.84□□□□□ -0.19
LPGAT1-202ENST00000366997 TANGO6Q9C0B7 1094 aa13.83□□□□□ -0.19
LPGAT1-202ENST00000366997 GUCY1B3Q02153 619 aa13.83□□□□□ -0.2
LPGAT1-202ENST00000366997 KIF6Q6ZMV9 814 aa13.83□□□□□ -0.2
LPGAT1-202ENST00000366997 MCM10Q7L590 875 aa13.83□□□□□ -0.2
LPGAT1-202ENST00000366997 KIAA1328Q86T90 577 aa13.83□□□□□ -0.2
LPGAT1-202ENST00000366997 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.2
LPGAT1-202ENST00000366997 ERLIN2O94905 339 aa13.83□□□□□ -0.2
LPGAT1-202ENST00000366997 TROQ12816 1431 aaPredicted RBP13.83□□□□□ -0.2
LPGAT1-202ENST00000366997 ALDH1L2Q3SY69 923 aa13.82□□□□□ -0.2
LPGAT1-202ENST00000366997 KRT32Q14532 448 aa13.82□□□□□ -0.2
LPGAT1-202ENST00000366997 CLCN1P35523 988 aa13.82□□□□□ -0.2
LPGAT1-202ENST00000366997 EPRSP07814 1512 aaKnown RBP13.82□□□□□ -0.2
LPGAT1-202ENST00000366997 ARHGAP29Q52LW3 1261 aa13.82□□□□□ -0.2
LPGAT1-202ENST00000366997 ANO10Q9NW15 660 aa13.82□□□□□ -0.2
LPGAT1-202ENST00000366997 PLEKHH1Q9ULM0 1364 aa13.81□□□□□ -0.2
LPGAT1-202ENST00000366997 GRIN2BQ13224 1484 aa13.81□□□□□ -0.2
LPGAT1-202ENST00000366997 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
LPGAT1-202ENST00000366997 KRT18P05783 430 aaKnown RBP13.81□□□□□ -0.2
LPGAT1-202ENST00000366997 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
LPGAT1-202ENST00000366997 IKQ13123 557 aaPredicted RBP13.81□□□□□ -0.2
LPGAT1-202ENST00000366997 KIF1BPQ96EK5 621 aa13.81□□□□□ -0.2
LPGAT1-202ENST00000366997 F6X3S4 739 aa13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 KLHL40Q2TBA0 621 aa13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 ZHX3Q9H4I2 956 aa13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 KIF2AO00139 706 aaPredicted RBP13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 C8orf34Q49A92 452 aa13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 RTEL1-TNFRSF6BF6WH68 1400 aa13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 CAMSAP2Q08AD1 1489 aa13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 BOLA2Q9H3K6 86 aa13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 PIBF1Q8WXW3 757 aa13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 MAPKBP1O60336 1514 aa13.8□□□□□ -0.2
LPGAT1-202ENST00000366997 SLC3A2P08195 630 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 1713.5 ms