RNA–Protein interactions for RNA: ENST00000366871.7

T-202, Transcript of Brachyury protein, humanhuman

TSL 1 (best) BASIC

Gene T, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-202ENST00000366871 C1orf115Q9H7X2 142 aa25.68■■□□□ 1.7
T-202ENST00000366871 RGS12O14924 1447 aa25.68■■□□□ 1.7
T-202ENST00000366871 NGDNQ8NEJ9 315 aaKnown RBP25.67■■□□□ 1.7
T-202ENST00000366871 GAS2L2Q8NHY3 880 aa25.67■■□□□ 1.7
T-202ENST00000366871 IGSF1Q8N6C5 1336 aa25.67■■□□□ 1.7
T-202ENST00000366871 NUTM2FA1L443 756 aa25.66■■□□□ 1.7
T-202ENST00000366871 MCM10Q7L590 875 aa25.66■■□□□ 1.7
T-202ENST00000366871 HSCBQ8IWL3 235 aa25.66■■□□□ 1.7
T-202ENST00000366871 ANKRD44Q8N8A2 993 aa25.66■■□□□ 1.7
T-202ENST00000366871 RTF1Q92541 710 aaKnown RBP25.66■■□□□ 1.7
T-202ENST00000366871 CHMP5Q9NZZ3 219 aa25.65■■□□□ 1.7
T-202ENST00000366871 FER1L4A9Z1Z3 1794 aa25.65■■□□□ 1.7
T-202ENST00000366871 USP54Q70EL1 1684 aa25.65■■□□□ 1.7
T-202ENST00000366871 SOS1Q07889 1333 aaPredicted RBP25.64■■□□□ 1.69
T-202ENST00000366871 NCOA3Q9Y6Q9 1424 aa25.62■■□□□ 1.69
T-202ENST00000366871 AMPHP49418 695 aa25.62■■□□□ 1.69
T-202ENST00000366871 MTHFSDQ2M296 383 aaKnown RBP25.62■■□□□ 1.69
T-202ENST00000366871 ATP10DQ9P241 1426 aa25.61■■□□□ 1.69
T-202ENST00000366871 PIK3C2AO00443 1686 aa25.61■■□□□ 1.69
T-202ENST00000366871 BABAM1Q9NWV8 329 aa25.61■■□□□ 1.69
T-202ENST00000366871 CDC45O75419 566 aa25.6■■□□□ 1.69
T-202ENST00000366871 EYA1Q99502 592 aa25.6■■□□□ 1.69
T-202ENST00000366871 TBC1D9Q6ZT07 1266 aa25.58■■□□□ 1.69
T-202ENST00000366871 RTL1A6NKG5 1358 aa25.58■■□□□ 1.69
T-202ENST00000366871 CEP85Q6P2H3 762 aa25.58■■□□□ 1.69
T-202ENST00000366871 PLEKHM2Q8IWE5 1019 aa25.58■■□□□ 1.69
T-202ENST00000366871 TSPYL4Q9UJ04 414 aa25.58■■□□□ 1.69
T-202ENST00000366871 CCT4P50991 539 aaKnown RBP25.57■■□□□ 1.68
T-202ENST00000366871 SLC4A2P04920 1241 aa25.57■■□□□ 1.68
T-202ENST00000366871 KRT24Q2M2I5 525 aa25.57■■□□□ 1.68
T-202ENST00000366871 RGPD8O14715 1765 aaPredicted RBP25.57■■□□□ 1.68
T-202ENST00000366871 CIZ1Q9ULV3 898 aaPredicted RBP25.56■■□□□ 1.68
T-202ENST00000366871 NLRP6P59044 892 aa25.55■■□□□ 1.68
T-202ENST00000366871 HMMRO75330 724 aa25.54■■□□□ 1.68
T-202ENST00000366871 LRRC37A3O60309 1634 aa25.54■■□□□ 1.68
T-202ENST00000366871 CEP170BQ9Y4F5 1589 aaPredicted RBP25.54■■□□□ 1.68
T-202ENST00000366871 DDIT3P35638 169 aa25.54■■□□□ 1.68
T-202ENST00000366871 MSH6P52701 1360 aa25.54■■□□□ 1.68
T-202ENST00000366871 TTC22Q5TAA0 569 aa25.53■■□□□ 1.68
T-202ENST00000366871 SOX12O15370 315 aa25.53■■□□□ 1.68
T-202ENST00000366871 HOXC9P31274 260 aa25.53■■□□□ 1.68
T-202ENST00000366871 MCM4P33991 863 aa25.53■■□□□ 1.68
T-202ENST00000366871 KIF2CQ99661 725 aa25.53■■□□□ 1.68
T-202ENST00000366871 GNAT3A8MTJ3 354 aa25.52■■□□□ 1.68
T-202ENST00000366871 KCNA6P17658 529 aa25.52■■□□□ 1.68
T-202ENST00000366871 FOXO3O43524 673 aa25.51■■□□□ 1.67
T-202ENST00000366871 GSPT1P15170 499 aaKnown RBP25.51■■□□□ 1.67
T-202ENST00000366871 STK31Q9BXU1 1019 aa25.51■■□□□ 1.67
T-202ENST00000366871 PLPPR3Q6T4P5 718 aa25.49■■□□□ 1.67
T-202ENST00000366871 MARF1Q9Y4F3 1742 aaKnown RBP25.49■■□□□ 1.67
T-202ENST00000366871 CCDC30Q5VVM6 783 aa25.49■■□□□ 1.67
T-202ENST00000366871 MEIS3Q99687 375 aa25.49■■□□□ 1.67
T-202ENST00000366871 NWD1Q149M9 1564 aa25.48■■□□□ 1.67
T-202ENST00000366871 MAP3K5Q99683 1374 aa25.46■■□□□ 1.67
T-202ENST00000366871 CACNA1FO60840 1977 aa25.46■■□□□ 1.67
T-202ENST00000366871 DDX11L8A8MPP1 907 aa25.46■■□□□ 1.67
T-202ENST00000366871 CASC1Q6TDU7 716 aa25.46■■□□□ 1.67
T-202ENST00000366871 ABTB2Q8N961 1025 aa25.46■■□□□ 1.67
T-202ENST00000366871 OSBPL3Q9H4L5 887 aa25.46■■□□□ 1.67
T-202ENST00000366871 L1TD1Q5T7N2 865 aaKnown RBP25.46■■□□□ 1.67
T-202ENST00000366871 MIS18AQ9NYP9 233 aa25.46■■□□□ 1.67
T-202ENST00000366871 HSP90AB1P08238 724 aaKnown RBP25.45■■□□□ 1.66
T-202ENST00000366871 SPRYD3Q8NCJ5 442 aa25.44■■□□□ 1.66
T-202ENST00000366871 K7ELQ4 463 aaPredicted RBP25.44■■□□□ 1.66
T-202ENST00000366871 GNAI2P04899 355 aa25.44■■□□□ 1.66
T-202ENST00000366871 GNAI3P08754 354 aa25.44■■□□□ 1.66
T-202ENST00000366871 CHMP4AQ9BY43 222 aa25.44■■□□□ 1.66
T-202ENST00000366871 TAF7Q15545 349 aaPredicted RBP25.43■■□□□ 1.66
T-202ENST00000366871 RABEP1Q15276 862 aa25.43■■□□□ 1.66
T-202ENST00000366871 PXDNLA1KZ92 1463 aa25.42■■□□□ 1.66
T-202ENST00000366871 PTMSP20962 102 aa25.42■■□□□ 1.66
T-202ENST00000366871 G2E3Q7L622 706 aa25.42■■□□□ 1.66
T-202ENST00000366871 PHF8Q9UPP1 1060 aa25.42■■□□□ 1.66
T-202ENST00000366871 CHD2O14647 1828 aaKnown RBP25.41■■□□□ 1.66
T-202ENST00000366871 FLIIQ13045 1269 aa25.4■■□□□ 1.66
T-202ENST00000366871 ANKLE2Q86XL3 938 aa25.4■■□□□ 1.66
T-202ENST00000366871 C16orf71Q8IYS4 520 aaPredicted RBP25.39■■□□□ 1.66
T-202ENST00000366871 IL17REQ8NFR9 667 aa25.39■■□□□ 1.66
T-202ENST00000366871 IP6K1Q92551 441 aa25.39■■□□□ 1.66
T-202ENST00000366871 USP26Q9BXU7 913 aa25.39■■□□□ 1.66
T-202ENST00000366871 FAM208AQ9UK61 1670 aaKnown RBP25.39■■□□□ 1.66
T-202ENST00000366871 SLC4A10Q6U841 1118 aa25.39■■□□□ 1.65
T-202ENST00000366871 RAB3GAP1Q15042 981 aa25.38■■□□□ 1.65
T-202ENST00000366871 SDSP20132 328 aa25.38■■□□□ 1.65
T-202ENST00000366871 IL27Q8NEV9 243 aa25.38■■□□□ 1.65
T-202ENST00000366871 GBP4Q96PP9 640 aa25.38■■□□□ 1.65
T-202ENST00000366871 N4BP2Q86UW6 1770 aaPredicted RBP25.37■■□□□ 1.65
T-202ENST00000366871 KCNH5Q8NCM2 988 aa25.37■■□□□ 1.65
T-202ENST00000366871 CEMIPQ8WUJ3 1361 aa25.37■■□□□ 1.65
T-202ENST00000366871 REC8O95072 547 aa25.37■■□□□ 1.65
T-202ENST00000366871 F6X3S4 739 aa25.36■■□□□ 1.65
T-202ENST00000366871 TRAK2O60296 914 aa25.36■■□□□ 1.65
T-202ENST00000366871 HOXB7P09629 217 aa25.36■■□□□ 1.65
T-202ENST00000366871 PHRF1Q9P1Y6 1649 aaKnown RBP25.35■■□□□ 1.65
T-202ENST00000366871 FKBP5Q13451 457 aaPredicted RBP25.35■■□□□ 1.65
T-202ENST00000366871 BRPF3Q9ULD4 1205 aa25.35■■□□□ 1.65
T-202ENST00000366871 ISY1Q9ULR0 285 aaKnown RBP25.35■■□□□ 1.65
T-202ENST00000366871 ZNF142P52746 1687 aaPredicted RBP25.35■■□□□ 1.65
T-202ENST00000366871 ATP8B2P98198 1209 aa25.35■■□□□ 1.65
T-202ENST00000366871 NFAT5O94916 1531 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms