RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 SPATA31E1Q6ZUB1 1445 aa21.2■□□□□ 0.98
SMG5-201ENST00000361813 OFD1O75665 1012 aa21.2■□□□□ 0.98
SMG5-201ENST00000361813 ANKRD1Q15327 319 aa21.2■□□□□ 0.98
SMG5-201ENST00000361813 PPP4R3BQ5MIZ7 849 aa21.19■□□□□ 0.98
SMG5-201ENST00000361813 OLFM4Q6UX06 510 aa21.19■□□□□ 0.98
SMG5-201ENST00000361813 SPDYE4A6NLX3 237 aa21.19■□□□□ 0.98
SMG5-201ENST00000361813 HSP90B2PQ58FF3 399 aa21.19■□□□□ 0.98
SMG5-201ENST00000361813 C16orf71Q8IYS4 520 aaPredicted RBP21.19■□□□□ 0.98
SMG5-201ENST00000361813 CKAP2LQ8IYA6 745 aa21.19■□□□□ 0.98
SMG5-201ENST00000361813 C16orf45Q96MC5 204 aaPredicted RBP21.19■□□□□ 0.98
SMG5-201ENST00000361813 ERICH4A6NGS2 130 aa21.19■□□□□ 0.98
SMG5-201ENST00000361813 FAM177A1Q8N128 213 aaPredicted RBP21.19■□□□□ 0.98
SMG5-201ENST00000361813 MBIPQ9NS73 344 aa21.19■□□□□ 0.98
SMG5-201ENST00000361813 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
SMG5-201ENST00000361813 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
SMG5-201ENST00000361813 PZPP20742 1482 aa21.18■□□□□ 0.98
SMG5-201ENST00000361813 FAM83GA6ND36 823 aa21.18■□□□□ 0.98
SMG5-201ENST00000361813 PRPF40BQ6NWY9 871 aaKnown RBP21.18■□□□□ 0.98
SMG5-201ENST00000361813 ZNF396Q96N95 335 aaPredicted RBP21.18■□□□□ 0.98
SMG5-201ENST00000361813 IPO7O95373 1038 aaKnown RBP21.17■□□□□ 0.98
SMG5-201ENST00000361813 TTLL5Q6EMB2 1281 aa21.17■□□□□ 0.98
SMG5-201ENST00000361813 AACSQ86V21 672 aa21.17■□□□□ 0.98
SMG5-201ENST00000361813 ERC1Q8IUD2 1116 aa21.17■□□□□ 0.98
SMG5-201ENST00000361813 ZBTB40Q9NUA8 1239 aa21.17■□□□□ 0.98
SMG5-201ENST00000361813 DDX11Q96FC9 970 aa21.17■□□□□ 0.98
SMG5-201ENST00000361813 SLC52A1Q9NWF4 448 aa21.17■□□□□ 0.98
SMG5-201ENST00000361813 RTEL1-TNFRSF6BF6WH68 1400 aa21.17■□□□□ 0.98
SMG5-201ENST00000361813 IL16Q14005 1332 aa21.17■□□□□ 0.98
SMG5-201ENST00000361813 ZGPATQ8N5A5 531 aaKnown RBP21.17■□□□□ 0.98
SMG5-201ENST00000361813 WAPLQ7Z5K2 1190 aa21.16■□□□□ 0.98
SMG5-201ENST00000361813 NME9Q86XW9 330 aa21.16■□□□□ 0.98
SMG5-201ENST00000361813 LIMCH1Q9UPQ0 1083 aa21.16■□□□□ 0.98
SMG5-201ENST00000361813 POLR3AO14802 1390 aaPredicted RBP21.15■□□□□ 0.98
SMG5-201ENST00000361813 URB2Q14146 1524 aaKnown RBP21.15■□□□□ 0.98
SMG5-201ENST00000361813 ATP2B1P20020 1258 aa21.15■□□□□ 0.98
SMG5-201ENST00000361813 TTC12Q9H892 705 aaPredicted RBP21.15■□□□□ 0.98
SMG5-201ENST00000361813 ANKRD20A12PQ8NF67 263 aa21.15■□□□□ 0.98
SMG5-201ENST00000361813 ZNF692Q9BU19 519 aaPredicted RBP21.15■□□□□ 0.98
SMG5-201ENST00000361813 PIK3C2GO75747 1445 aa21.15■□□□□ 0.98
SMG5-201ENST00000361813 SERPINC1P01008 464 aa21.14■□□□□ 0.98
SMG5-201ENST00000361813 MAPK8IP2Q13387 824 aaPredicted RBP21.14■□□□□ 0.98
SMG5-201ENST00000361813 CCDC70Q6NSX1 233 aa21.14■□□□□ 0.98
SMG5-201ENST00000361813 PCMTD1Q96MG8 357 aaPredicted RBP21.14■□□□□ 0.97
SMG5-201ENST00000361813 TNNT1P13805 278 aa21.14■□□□□ 0.97
SMG5-201ENST00000361813 GIMAP6Q6P9H5 292 aa21.14■□□□□ 0.97
SMG5-201ENST00000361813 CEP57L1Q8IYX8 460 aa21.14■□□□□ 0.97
SMG5-201ENST00000361813 PSME1Q06323 249 aa21.14■□□□□ 0.97
SMG5-201ENST00000361813 NOLC1Q14978 699 aaKnown RBP eCLIP21.14■□□□□ 0.978e-7■□□□□ 9.3
SMG5-201ENST00000361813 SAFBQ15424 915 aaKnown RBP eCLIP21.14■□□□□ 0.97
SMG5-201ENST00000361813 PTPN14Q15678 1187 aa21.14■□□□□ 0.97
SMG5-201ENST00000361813 STX6O43752 255 aa21.13■□□□□ 0.97
SMG5-201ENST00000361813 CFAP45Q9UL16 551 aa21.13■□□□□ 0.97
SMG5-201ENST00000361813 SPG7Q9UQ90 795 aa21.13■□□□□ 0.97
SMG5-201ENST00000361813 KIF14Q15058 1648 aa21.13■□□□□ 0.97
SMG5-201ENST00000361813 TFIP11Q9UBB9 837 aaKnown RBP21.13■□□□□ 0.97
SMG5-201ENST00000361813 KIF1BPQ96EK5 621 aa21.12■□□□□ 0.97
SMG5-201ENST00000361813 PRIMPOLQ96LW4 560 aa21.12■□□□□ 0.97
SMG5-201ENST00000361813 ARHGAP45Q92619 1136 aa21.12■□□□□ 0.97
SMG5-201ENST00000361813 LRRFIP2Q9Y608 721 aaKnown RBP21.12■□□□□ 0.97
SMG5-201ENST00000361813 ZMYM4Q5VZL5 1548 aa21.12■□□□□ 0.97
SMG5-201ENST00000361813 MEIS3Q99687 375 aa21.12■□□□□ 0.97
SMG5-201ENST00000361813 RBM25P49756 843 aaKnown RBP21.11■□□□□ 0.97
SMG5-201ENST00000361813 ABTB2Q8N961 1025 aa21.11■□□□□ 0.97
SMG5-201ENST00000361813 NOS1P29475 1434 aa21.11■□□□□ 0.97
SMG5-201ENST00000361813 NUP153P49790 1475 aaKnown RBP21.11■□□□□ 0.97
SMG5-201ENST00000361813 RAB11FIP3O75154 756 aa21.11■□□□□ 0.97
SMG5-201ENST00000361813 RAPGEF3O95398 923 aa21.11■□□□□ 0.97
SMG5-201ENST00000361813 C14orf93Q9H972 538 aaKnown RBP21.11■□□□□ 0.97
SMG5-201ENST00000361813 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
SMG5-201ENST00000361813 UHRF1BP1Q6BDS2 1440 aa21.1■□□□□ 0.97
SMG5-201ENST00000361813 GLRX3O76003 335 aaKnown RBP21.1■□□□□ 0.97
SMG5-201ENST00000361813 SETQ01105 290 aaPredicted RBP21.1■□□□□ 0.97
SMG5-201ENST00000361813 RBSNQ9H1K0 784 aa21.1■□□□□ 0.97
SMG5-201ENST00000361813 CWC15Q9P013 229 aaKnown RBP21.1■□□□□ 0.97
SMG5-201ENST00000361813 CLIP2Q9UDT6 1046 aa21.1■□□□□ 0.97
SMG5-201ENST00000361813 SCAND2PQ9GZW5 306 aaPredicted RBP21.1■□□□□ 0.97
SMG5-201ENST00000361813 TRMT1Q9NXH9 659 aaKnown RBP21.1■□□□□ 0.97
SMG5-201ENST00000361813 CCP110O43303 1012 aa21.1■□□□□ 0.97
SMG5-201ENST00000361813 USP48Q86UV5 1035 aa21.1■□□□□ 0.97
SMG5-201ENST00000361813 UBE2HP62256 183 aa21.09■□□□□ 0.97
SMG5-201ENST00000361813 UVSSAQ2YD98 709 aa21.09■□□□□ 0.97
SMG5-201ENST00000361813 COL17A1Q9UMD9 1497 aaPredicted RBP21.09■□□□□ 0.97
SMG5-201ENST00000361813 HS1BP3Q53T59 392 aa21.09■□□□□ 0.97
SMG5-201ENST00000361813 NUDT16Q96DE0 195 aaKnown RBP21.09■□□□□ 0.97
SMG5-201ENST00000361813 ACBD3Q9H3P7 528 aa21.09■□□□□ 0.97
SMG5-201ENST00000361813 NOM1Q5C9Z4 860 aaKnown RBP21.09■□□□□ 0.97
SMG5-201ENST00000361813 TSPYL6Q8N831 410 aa21.09■□□□□ 0.97
SMG5-201ENST00000361813 CGNQ9P2M7 1197 aaKnown RBP21.09■□□□□ 0.97
SMG5-201ENST00000361813 BLMP54132 1417 aaPredicted RBP21.08■□□□□ 0.97
SMG5-201ENST00000361813 SKIDA1Q1XH10 827 aa21.08■□□□□ 0.97
SMG5-201ENST00000361813 UBXN4Q92575 508 aa21.08■□□□□ 0.97
SMG5-201ENST00000361813 MRPL50Q8N5N7 158 aaKnown RBP21.08■□□□□ 0.97
SMG5-201ENST00000361813 C8orf58Q8NAV2 365 aa21.08■□□□□ 0.97
SMG5-201ENST00000361813 GRIN2AQ12879 1464 aa21.08■□□□□ 0.96
SMG5-201ENST00000361813 GJB2P29033 226 aa21.08■□□□□ 0.96
SMG5-201ENST00000361813 BRPF1P55201 1214 aaPredicted RBP21.08■□□□□ 0.96
SMG5-201ENST00000361813 CNPY2Q9Y2B0 182 aa21.08■□□□□ 0.96
SMG5-201ENST00000361813 ARHGEF12Q9NZN5 1544 aa21.08■□□□□ 0.96
SMG5-201ENST00000361813 FYB1O15117 783 aa21.07■□□□□ 0.96
SMG5-201ENST00000361813 NUP160Q12769 1436 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms