RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 TNNT1P13805 278 aa20.19■□□□□ 0.82
CACNA1A-201ENST00000360228 GTF2A1P52655 376 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-201ENST00000360228 USP5P45974 858 aa20.19■□□□□ 0.82
CACNA1A-201ENST00000360228 VPS36Q86VN1 386 aa20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 TTC16Q8NEE8 873 aa20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 CCDC160A6NGH7 325 aa20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 IRX3P78415 501 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 ZNF428Q96B54 188 aa20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 NUP62CLQ9H1M0 184 aa20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 C1orf115Q9H7X2 142 aa20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 SPECC1Q5M775 1068 aa20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 SCLT1Q96NL6 688 aa20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 ZNF526Q8TF50 670 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 CACNA2D4Q7Z3S7 1137 aa20.18■□□□□ 0.82
CACNA1A-201ENST00000360228 MIA2Q96PC5 1412 aa20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 TAOK3Q9H2K8 898 aa20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 GON4LQ3T8J9 2241 aa20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 C6orf163Q5TEZ5 329 aa20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 SIL1Q9H173 461 aa20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 PABPN1LA6NDY0 278 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 TMEM87AQ8NBN3 555 aa20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 ZFP91Q96JP5 570 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 ZSCAN29Q8IWY8 852 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 FKBP4Q02790 459 aaKnown RBP eCLIP20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 PTPN14Q15678 1187 aa20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 TRERF1Q96PN7 1200 aa20.17■□□□□ 0.82
CACNA1A-201ENST00000360228 DRC1Q96MC2 740 aa20.16■□□□□ 0.82
CACNA1A-201ENST00000360228 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
CACNA1A-201ENST00000360228 PDIA4P13667 645 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-201ENST00000360228 NUTM2GQ5VZR2 741 aa20.16■□□□□ 0.82
CACNA1A-201ENST00000360228 PPP4R3AQ6IN85 833 aa20.16■□□□□ 0.82
CACNA1A-201ENST00000360228 VGFO15240 615 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-201ENST00000360228 CAMK4Q16566 473 aa20.16■□□□□ 0.82
CACNA1A-201ENST00000360228 CTR9Q6PD62 1173 aa20.16■□□□□ 0.82
CACNA1A-201ENST00000360228 MRPS9P82933 396 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-201ENST00000360228 KIF3CO14782 793 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 TDO2P48775 406 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 WDR70Q9NW82 654 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 SWAP70Q9UH65 585 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 UBAC1Q9BSL1 405 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 NLRP2Q9NX02 1062 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 CPSF2Q9P2I0 782 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 GNAI2P04899 355 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 MNAT1P51948 309 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 CEP131Q9UPN4 1083 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 ATF3P18847 181 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 KIF18AQ8NI77 898 aa20.15■□□□□ 0.82
CACNA1A-201ENST00000360228 FKBP15Q5T1M5 1219 aa20.14■□□□□ 0.81
CACNA1A-201ENST00000360228 CGNQ9P2M7 1197 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-201ENST00000360228 HLTFQ14527 1009 aaKnown RBP eCLIP20.14■□□□□ 0.81
CACNA1A-201ENST00000360228 TNIP1Q15025 636 aa20.14■□□□□ 0.81
CACNA1A-201ENST00000360228 SPECC1LQ69YQ0 1117 aa20.14■□□□□ 0.81
CACNA1A-201ENST00000360228 GNAI3P08754 354 aa20.14■□□□□ 0.81
CACNA1A-201ENST00000360228 APBB1IPQ7Z5R6 666 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-201ENST00000360228 KLHL10Q6JEL2 608 aa20.14■□□□□ 0.81
CACNA1A-201ENST00000360228 KIF2AO00139 706 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 ZSCAN12O43309 604 aa20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 PRKRIP1Q9H875 184 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 FSD2A1L4K1 749 aa20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 PPP1R14CQ8TAE6 165 aa20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 TSNARE1Q96NA8 513 aa20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 TMX1Q9H3N1 280 aa20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 SEC63Q9UGP8 760 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 KANK4Q5T7N3 995 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 UBA5Q9GZZ9 404 aa20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 TSG101Q99816 390 aa20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 SFPQP23246 707 aaKnown RBP eCLIP20.13■□□□□ 0.81
CACNA1A-201ENST00000360228 FERMT2Q96AC1 680 aa20.12■□□□□ 0.81
CACNA1A-201ENST00000360228 K7ELQ4 463 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-201ENST00000360228 NUP88Q99567 741 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-201ENST00000360228 NAP1L3Q99457 506 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-201ENST00000360228 SSX2IPQ9Y2D8 614 aa20.12■□□□□ 0.81
CACNA1A-201ENST00000360228 DDX46Q7L014 1031 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-201ENST00000360228 MPHOSPH8Q99549 860 aa20.11■□□□□ 0.81
CACNA1A-201ENST00000360228 MAP3K11Q16584 847 aa20.11■□□□□ 0.81
CACNA1A-201ENST00000360228 SPINK5Q9NQ38 1064 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-201ENST00000360228 KIF4BQ2VIQ3 1234 aa20.11■□□□□ 0.81
CACNA1A-201ENST00000360228 RAB3IL1Q8TBN0 382 aa20.11■□□□□ 0.81
CACNA1A-201ENST00000360228 ARL1P40616 181 aaPredicted RBP20.11■□□□□ 0.81
CACNA1A-201ENST00000360228 IKBKGQ9Y6K9 419 aa20.11■□□□□ 0.81
CACNA1A-201ENST00000360228 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-201ENST00000360228 DNAAF4Q8WXU2 420 aa20.1■□□□□ 0.81
CACNA1A-201ENST00000360228 SYCE3A1L190 88 aa20.1■□□□□ 0.81
CACNA1A-201ENST00000360228 ZSCAN25Q6NSZ9 544 aa20.1■□□□□ 0.81
CACNA1A-201ENST00000360228 SREK1Q8WXA9 508 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-201ENST00000360228 MYCNP04198 464 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-201ENST00000360228 LMAN1P49257 510 aa20.09■□□□□ 0.81
CACNA1A-201ENST00000360228 PRPF4BQ13523 1007 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-201ENST00000360228 WASF1Q92558 559 aa20.09■□□□□ 0.81
CACNA1A-201ENST00000360228 SRRTQ9BXP5 876 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-201ENST00000360228 A0A1W2PRG0 241 aa20.08■□□□□ 0.81
CACNA1A-201ENST00000360228 URI1O94763 535 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-201ENST00000360228 PAIP2Q9BPZ3 127 aaKnown RBP20.08■□□□□ 0.81
CACNA1A-201ENST00000360228 PAFAH1B1P43034 410 aa20.08■□□□□ 0.8
CACNA1A-201ENST00000360228 MXRA7P84157 204 aa20.07■□□□□ 0.8
CACNA1A-201ENST00000360228 MAATS1Q7Z4T9 603 aa20.07■□□□□ 0.8
CACNA1A-201ENST00000360228 CFAP58Q5T655 872 aa20.07■□□□□ 0.8
CACNA1A-201ENST00000360228 BLOC1S2Q6QNY1 142 aa20.07■□□□□ 0.8
CACNA1A-201ENST00000360228 PDRG1Q9NUG6 133 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms