RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
FN1-205ENST00000357867 NOB1Q9ULX3 412 aaKnown RBP13.06□□□□□ -0.32
FN1-205ENST00000357867 A0A087WZG4 1122 aa13.06□□□□□ -0.32
FN1-205ENST00000357867 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.329e-7■■□□□ 13.9
FN1-205ENST00000357867 DZIP1Q86YF9 867 aaKnown RBP13.06□□□□□ -0.32
FN1-205ENST00000357867 USP5P45974 858 aa13.06□□□□□ -0.32
FN1-205ENST00000357867 SDF4Q9BRK5 362 aa13.06□□□□□ -0.32
FN1-205ENST00000357867 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
FN1-205ENST00000357867 IFIT1P09914 478 aaKnown RBP13.05□□□□□ -0.32
FN1-205ENST00000357867 TMEM87AQ8NBN3 555 aa13.05□□□□□ -0.32
FN1-205ENST00000357867 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
FN1-205ENST00000357867 MYO1BO43795 1136 aa13.05□□□□□ -0.32
FN1-205ENST00000357867 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
FN1-205ENST00000357867 ZNF428Q96B54 188 aa13.05□□□□□ -0.32
FN1-205ENST00000357867 SEC63Q9UGP8 760 aaKnown RBP13.05□□□□□ -0.32
FN1-205ENST00000357867 ASXL2Q76L83 1435 aa13.05□□□□□ -0.32
FN1-205ENST00000357867 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
FN1-205ENST00000357867 HOMER1Q86YM7 354 aa13.05□□□□□ -0.32
FN1-205ENST00000357867 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
FN1-205ENST00000357867 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
FN1-205ENST00000357867 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
FN1-205ENST00000357867 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
FN1-205ENST00000357867 ATF7IPQ6VMQ6 1270 aa13.04□□□□□ -0.32
FN1-205ENST00000357867 TAF7Q15545 349 aaPredicted RBP13.04□□□□□ -0.32
FN1-205ENST00000357867 NPHP3Q7Z494 1330 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 IFIT5Q13325 482 aaKnown RBP13.03□□□□□ -0.32
FN1-205ENST00000357867 HYPKQ9NX55 129 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 POLR3DP05423 398 aaPredicted RBP13.03□□□□□ -0.32
FN1-205ENST00000357867 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
FN1-205ENST00000357867 WDR7Q9Y4E6 1490 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 STK11IPQ8N1F8 1099 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.03□□□□□ -0.32
FN1-205ENST00000357867 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 PPP4R3AQ6IN85 833 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 AACSQ86V21 672 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 PDE4AP27815 886 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
FN1-205ENST00000357867 BMP2KQ9NSY1 1161 aaPredicted RBP13.03□□□□□ -0.32
FN1-205ENST00000357867 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
FN1-205ENST00000357867 CEBPAP49715 358 aaPredicted RBP13.03□□□□□ -0.32
FN1-205ENST00000357867 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.32
FN1-205ENST00000357867 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.32
FN1-205ENST00000357867 MKNK2Q9HBH9 465 aa13.02□□□□□ -0.32
FN1-205ENST00000357867 UHRF1BP1LA0JNW5 1464 aa13.02□□□□□ -0.32
FN1-205ENST00000357867 C22orf23Q9BZE7 217 aa13.02□□□□□ -0.32
FN1-205ENST00000357867 SLC5A1P13866 664 aa13.02□□□□□ -0.33
FN1-205ENST00000357867 LUC7LQ9NQ29 371 aaKnown RBP13.02□□□□□ -0.33
FN1-205ENST00000357867 SMARCE1Q969G3 411 aa13.02□□□□□ -0.33
FN1-205ENST00000357867 AIDAQ96BJ3 306 aa13.02□□□□□ -0.33
FN1-205ENST00000357867 CDC5LQ99459 802 aaKnown RBP13.02□□□□□ -0.33
FN1-205ENST00000357867 CDR1P51861 262 aa13.02□□□□□ -0.33
FN1-205ENST00000357867 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.33
FN1-205ENST00000357867 NBPF14Q5TI25 921 aa13.02□□□□□ -0.33
FN1-205ENST00000357867 DDX46Q7L014 1031 aaKnown RBP13.02□□□□□ -0.33
FN1-205ENST00000357867 PPP1R42Q7Z4L9 355 aa13.02□□□□□ -0.33
FN1-205ENST00000357867 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.33
FN1-205ENST00000357867 ZNF608Q9ULD9 1512 aaPredicted RBP13.01□□□□□ -0.33
FN1-205ENST00000357867 C8orf37Q96NL8 207 aa13.01□□□□□ -0.33
FN1-205ENST00000357867 RUFY1Q96T51 708 aa13.01□□□□□ -0.33
FN1-205ENST00000357867 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
FN1-205ENST00000357867 SPDYE4A6NLX3 237 aa13.01□□□□□ -0.33
FN1-205ENST00000357867 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
FN1-205ENST00000357867 CYP46A1Q9Y6A2 500 aa13.01□□□□□ -0.33
FN1-205ENST00000357867 KDM4AO75164 1064 aa13.01□□□□□ -0.33
FN1-205ENST00000357867 LETM1O95202 739 aaPredicted RBP13.01□□□□□ -0.33
FN1-205ENST00000357867 WASF1Q92558 559 aa13.01□□□□□ -0.33
FN1-205ENST00000357867 ZHX3Q9H4I2 956 aa13.01□□□□□ -0.33
FN1-205ENST00000357867 IDH1O75874 414 aaKnown RBP13□□□□□ -0.33
FN1-205ENST00000357867 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
FN1-205ENST00000357867 POLD1P28340 1107 aa13□□□□□ -0.33
FN1-205ENST00000357867 DNAJC5BQ9UF47 199 aa13□□□□□ -0.33
FN1-205ENST00000357867 KRT32Q14532 448 aa13□□□□□ -0.33
FN1-205ENST00000357867 FBXO3Q9UK99 471 aa13□□□□□ -0.33
FN1-205ENST00000357867 MAP3K1Q13233 1512 aa13□□□□□ -0.33
FN1-205ENST00000357867 NCOA1Q15788 1441 aa13□□□□□ -0.33
FN1-205ENST00000357867 ATP2B1P20020 1258 aa13□□□□□ -0.33
FN1-205ENST00000357867 PDCL3Q9H2J4 239 aa12.99□□□□□ -0.33
FN1-205ENST00000357867 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
FN1-205ENST00000357867 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.33
FN1-205ENST00000357867 A2MP01023 1474 aa12.99□□□□□ -0.33
FN1-205ENST00000357867 PDE3AQ14432 1141 aa12.99□□□□□ -0.33
FN1-205ENST00000357867 IMMTQ16891 758 aaKnown RBP12.99□□□□□ -0.33
FN1-205ENST00000357867 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
FN1-205ENST00000357867 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
FN1-205ENST00000357867 TXLNBQ8N3L3 684 aa12.99□□□□□ -0.33
FN1-205ENST00000357867 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
FN1-205ENST00000357867 CHD1O14646 1710 aa12.99□□□□□ -0.33
FN1-205ENST00000357867 RAB11FIP3O75154 756 aa12.99□□□□□ -0.33
FN1-205ENST00000357867 SETQ01105 290 aaPredicted RBP12.98□□□□□ -0.33
FN1-205ENST00000357867 MAP3K12Q12852 859 aa12.98□□□□□ -0.33
FN1-205ENST00000357867 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
FN1-205ENST00000357867 DACH1Q9UI36 760 aa12.98□□□□□ -0.33
FN1-205ENST00000357867 DHX29Q7Z478 1369 aaKnown RBP12.98□□□□□ -0.33
FN1-205ENST00000357867 ANKRD18BA2A2Z9 1011 aa12.98□□□□□ -0.33
FN1-205ENST00000357867 ABCC5O15440 1437 aa12.98□□□□□ -0.33
FN1-205ENST00000357867 CUL5Q93034 780 aa12.98□□□□□ -0.33
FN1-205ENST00000357867 IDI1Q13907 227 aa12.98□□□□□ -0.33
FN1-205ENST00000357867 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
FN1-205ENST00000357867 DEKP35659 375 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms