RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 PLEKHM2Q8IWE5 1019 aa21.99■■□□□ 1.11
GYPC-202ENST00000356887 OVOS2A0A0J9YW53 1432 aa21.99■■□□□ 1.11
GYPC-202ENST00000356887 OVOS2Q6IE36 1432 aa21.99■■□□□ 1.11
GYPC-202ENST00000356887 RGS12O14924 1447 aa21.99■■□□□ 1.11
GYPC-202ENST00000356887 HSP90AB1P08238 724 aaKnown RBP21.99■■□□□ 1.11
GYPC-202ENST00000356887 ACEP12821 1306 aa21.98■■□□□ 1.11
GYPC-202ENST00000356887 KIAA0232Q92628 1395 aa21.98■■□□□ 1.11
GYPC-202ENST00000356887 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.98■■□□□ 1.11
GYPC-202ENST00000356887 DDX11L8A8MPP1 907 aa21.98■■□□□ 1.11
GYPC-202ENST00000356887 ANKRD44Q8N8A2 993 aa21.98■■□□□ 1.11
GYPC-202ENST00000356887 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
GYPC-202ENST00000356887 GOLGA6L3A6NEY3 463 aa21.97■■□□□ 1.11
GYPC-202ENST00000356887 GSPT1P15170 499 aaKnown RBP21.97■■□□□ 1.11
GYPC-202ENST00000356887 KRT24Q2M2I5 525 aa21.97■■□□□ 1.11
GYPC-202ENST00000356887 CD2BP2O95400 341 aaKnown RBP21.95■■□□□ 1.11
GYPC-202ENST00000356887 MCM10Q7L590 875 aa21.95■■□□□ 1.11
GYPC-202ENST00000356887 GZF1Q9H116 711 aaPredicted RBP21.95■■□□□ 1.11
GYPC-202ENST00000356887 RGPD1P0DJD0 1748 aa21.95■■□□□ 1.11
GYPC-202ENST00000356887 PEAK1Q9H792 1746 aa21.95■■□□□ 1.1
GYPC-202ENST00000356887 XRCC6P12956 609 aaKnown RBP eCLIP21.95■■□□□ 1.1
GYPC-202ENST00000356887 RPAP2Q8IXW5 612 aaPredicted RBP21.95■■□□□ 1.1
GYPC-202ENST00000356887 TNPO1Q92973 898 aaKnown RBP21.95■■□□□ 1.1
GYPC-202ENST00000356887 ATP10DQ9P241 1426 aa21.95■■□□□ 1.1
GYPC-202ENST00000356887 NALCNQ8IZF0 1738 aa21.95■■□□□ 1.1
GYPC-202ENST00000356887 HSP90AB2PQ58FF8 381 aa21.94■■□□□ 1.1
GYPC-202ENST00000356887 USP31Q70CQ4 1352 aa21.94■■□□□ 1.1
GYPC-202ENST00000356887 USP6P35125 1406 aa21.94■■□□□ 1.1
GYPC-202ENST00000356887 K7ELQ4 463 aaPredicted RBP21.94■■□□□ 1.1
GYPC-202ENST00000356887 PTPRCP08575 1304 aa21.94■■□□□ 1.1
GYPC-202ENST00000356887 RAB3GAP1Q15042 981 aa21.94■■□□□ 1.1
GYPC-202ENST00000356887 TTC22Q5TAA0 569 aa21.93■■□□□ 1.1
GYPC-202ENST00000356887 CRB1P82279 1406 aa21.93■■□□□ 1.1
GYPC-202ENST00000356887 CEP85Q6P2H3 762 aa21.92■■□□□ 1.1
GYPC-202ENST00000356887 SLC26A8Q96RN1 970 aa21.92■■□□□ 1.1
GYPC-202ENST00000356887 RBM42Q9BTD8 480 aaKnown RBP21.92■■□□□ 1.1
GYPC-202ENST00000356887 C16orf71Q8IYS4 520 aaPredicted RBP21.91■■□□□ 1.1
GYPC-202ENST00000356887 SSH2Q76I76 1423 aa21.91■■□□□ 1.1
GYPC-202ENST00000356887 RTL1A6NKG5 1358 aa21.9■■□□□ 1.1
GYPC-202ENST00000356887 DIP2AQ14689 1571 aa21.9■■□□□ 1.1
GYPC-202ENST00000356887 GBP4Q96PP9 640 aa21.89■■□□□ 1.1
GYPC-202ENST00000356887 MSH6P52701 1360 aa21.89■■□□□ 1.09
GYPC-202ENST00000356887 NUTM2FA1L443 756 aa21.89■■□□□ 1.09
GYPC-202ENST00000356887 ARHGEF10O15013 1369 aa21.88■■□□□ 1.09
GYPC-202ENST00000356887 ANKLE2Q86XL3 938 aa21.88■■□□□ 1.09
GYPC-202ENST00000356887 GLIPR1L2Q4G1C9 344 aa21.87■■□□□ 1.09
GYPC-202ENST00000356887 HSP90AA1P07900 732 aaKnown RBP21.87■■□□□ 1.09
GYPC-202ENST00000356887 GAS2L2Q8NHY3 880 aa21.87■■□□□ 1.09
GYPC-202ENST00000356887 MEIS3Q99687 375 aa21.87■■□□□ 1.09
GYPC-202ENST00000356887 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.87■■□□□ 1.09
GYPC-202ENST00000356887 PTPRUQ92729 1446 aa21.86■■□□□ 1.09
GYPC-202ENST00000356887 SLC4A2P04920 1241 aa21.86■■□□□ 1.09
GYPC-202ENST00000356887 OTUD7AQ8TE49 926 aaPredicted RBP21.86■■□□□ 1.09
GYPC-202ENST00000356887 USP26Q9BXU7 913 aa21.86■■□□□ 1.09
GYPC-202ENST00000356887 MRE11P49959 708 aa21.86■■□□□ 1.09
GYPC-202ENST00000356887 RABEP1Q15276 862 aa21.86■■□□□ 1.09
GYPC-202ENST00000356887 ARXQ96QS3 562 aa21.86■■□□□ 1.09
GYPC-202ENST00000356887 FOXD4L1Q9NU39 408 aa21.86■■□□□ 1.09
GYPC-202ENST00000356887 PODXL2Q9NZ53 605 aa21.86■■□□□ 1.09
GYPC-202ENST00000356887 TBX22Q9Y458 520 aa21.86■■□□□ 1.09
GYPC-202ENST00000356887 MAP3K19Q56UN5 1328 aa21.85■■□□□ 1.09
GYPC-202ENST00000356887 TTC21AQ8NDW8 1320 aa21.85■■□□□ 1.09
GYPC-202ENST00000356887 PTMSP20962 102 aa21.85■■□□□ 1.09
GYPC-202ENST00000356887 MTHFSDQ2M296 383 aaKnown RBP21.84■■□□□ 1.09
GYPC-202ENST00000356887 ISY1Q9ULR0 285 aaKnown RBP21.84■■□□□ 1.09
GYPC-202ENST00000356887 SKOR2Q2VWA4 1001 aaPredicted RBP21.84■■□□□ 1.09
GYPC-202ENST00000356887 PANK2Q9BZ23 570 aa21.84■■□□□ 1.09
GYPC-202ENST00000356887 MIS18AQ9NYP9 233 aa21.84■■□□□ 1.09
GYPC-202ENST00000356887 FOXO3O43524 673 aa21.83■■□□□ 1.09
GYPC-202ENST00000356887 SMARCA5O60264 1052 aaPredicted RBP21.83■■□□□ 1.09
GYPC-202ENST00000356887 SDSP20132 328 aa21.83■■□□□ 1.09
GYPC-202ENST00000356887 CLEC17AQ6ZS10 378 aa21.83■■□□□ 1.08
GYPC-202ENST00000356887 RRAGDQ9NQL2 400 aaPredicted RBP21.83■■□□□ 1.08
GYPC-202ENST00000356887 FMN2Q9NZ56 1722 aa21.82■■□□□ 1.08
GYPC-202ENST00000356887 SOX12O15370 315 aa21.82■■□□□ 1.08
GYPC-202ENST00000356887 SBNO1A3KN83 1393 aa21.82■■□□□ 1.08
GYPC-202ENST00000356887 KDRP35968 1356 aa21.82■■□□□ 1.08
GYPC-202ENST00000356887 G2E3Q7L622 706 aa21.81■■□□□ 1.08
GYPC-202ENST00000356887 RTF1Q92541 710 aaKnown RBP21.81■■□□□ 1.08
GYPC-202ENST00000356887 TSPYL4Q9UJ04 414 aa21.81■■□□□ 1.08
GYPC-202ENST00000356887 FLT4P35916 1363 aa21.81■■□□□ 1.08
GYPC-202ENST00000356887 XRN1Q8IZH2 1706 aaKnown RBP21.8■■□□□ 1.08
GYPC-202ENST00000356887 SSFA2P28290 1259 aa21.8■■□□□ 1.08
GYPC-202ENST00000356887 CCT4P50991 539 aaKnown RBP21.8■■□□□ 1.08
GYPC-202ENST00000356887 GRPEL1Q9HAV7 217 aa21.8■■□□□ 1.08
GYPC-202ENST00000356887 HMMRO75330 724 aa21.79■■□□□ 1.08
GYPC-202ENST00000356887 CASC1Q6TDU7 716 aa21.79■■□□□ 1.08
GYPC-202ENST00000356887 AMOTL2Q9Y2J4 779 aa21.79■■□□□ 1.08
GYPC-202ENST00000356887 NPHP4O75161 1426 aaPredicted RBP21.79■■□□□ 1.08
GYPC-202ENST00000356887 APBB1O00213 710 aa21.78■■□□□ 1.08
GYPC-202ENST00000356887 IGSF1Q8N6C5 1336 aa21.78■■□□□ 1.08
GYPC-202ENST00000356887 EYA1Q99502 592 aa21.78■■□□□ 1.08
GYPC-202ENST00000356887 CHD2O14647 1828 aaKnown RBP21.77■■□□□ 1.08
GYPC-202ENST00000356887 F6X3S4 739 aa21.77■■□□□ 1.08
GYPC-202ENST00000356887 OSBPL3Q9H4L5 887 aa21.77■■□□□ 1.08
GYPC-202ENST00000356887 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
GYPC-202ENST00000356887 SLC4A10Q6U841 1118 aa21.76■■□□□ 1.07
GYPC-202ENST00000356887 AMPHP49418 695 aa21.75■■□□□ 1.07
GYPC-202ENST00000356887 GAS2L3Q86XJ1 694 aa21.75■■□□□ 1.07
GYPC-202ENST00000356887 NGDNQ8NEJ9 315 aaKnown RBP21.75■■□□□ 1.07
GYPC-202ENST00000356887 BAG4O95429 457 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms