RNA–Protein interactions for RNA: ENST00000356521.8

CBWD1-202, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-202ENST00000356521 PRKRIP1Q9H875 184 aaPredicted RBP23.54■■□□□ 1.36
CBWD1-202ENST00000356521 ZCRB1Q8TBF4 217 aaKnown RBP23.53■■□□□ 1.36
CBWD1-202ENST00000356521 UPF1Q92900 1129 aaKnown RBP eCLIP23.53■■□□□ 1.36
CBWD1-202ENST00000356521 MYBBP1AQ9BQG0 1328 aaKnown RBP23.53■■□□□ 1.36
CBWD1-202ENST00000356521 FAM196AQ6ZSG2 479 aa23.53■■□□□ 1.36
CBWD1-202ENST00000356521 HMOX1P09601 288 aa23.52■■□□□ 1.36
CBWD1-202ENST00000356521 SHANK3Q9BYB0 1731 aa23.52■■□□□ 1.36
CBWD1-202ENST00000356521 KDRP35968 1356 aa23.49■■□□□ 1.35
CBWD1-202ENST00000356521 PKD1L3Q7Z443 1732 aa23.49■■□□□ 1.35
CBWD1-202ENST00000356521 PCDH11XQ9BZA7 1347 aa23.48■■□□□ 1.35
CBWD1-202ENST00000356521 PCDH11YQ9BZA8 1340 aa23.48■■□□□ 1.35
CBWD1-202ENST00000356521 TRIM37O94972 964 aa23.47■■□□□ 1.35
CBWD1-202ENST00000356521 NUDCQ9Y266 331 aa23.47■■□□□ 1.35
CBWD1-202ENST00000356521 SPG7Q9UQ90 795 aa23.46■■□□□ 1.35
CBWD1-202ENST00000356521 U2AF1L5P0DN76 240 aaPredicted RBP23.45■■□□□ 1.34
CBWD1-202ENST00000356521 U2AF1Q01081 240 aaKnown RBP eCLIP23.45■■□□□ 1.34
CBWD1-202ENST00000356521 ANP32CO43423 234 aa23.45■■□□□ 1.34
CBWD1-202ENST00000356521 CYP27B1O15528 508 aa23.43■■□□□ 1.34
CBWD1-202ENST00000356521 SF3B2Q13435 895 aaKnown RBP23.43■■□□□ 1.34
CBWD1-202ENST00000356521 ACSBG1Q96GR2 724 aa23.43■■□□□ 1.34
CBWD1-202ENST00000356521 BCL9O00512 1426 aa23.42■■□□□ 1.34
CBWD1-202ENST00000356521 SBF2Q86WG5 1849 aa23.42■■□□□ 1.34
CBWD1-202ENST00000356521 CCDC125Q86Z20 511 aa23.42■■□□□ 1.34
CBWD1-202ENST00000356521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.42■■□□□ 1.341e-6■■■■□ 25.6
CBWD1-202ENST00000356521 TNS1Q9HBL0 1735 aaKnown RBP23.42■■□□□ 1.34
CBWD1-202ENST00000356521 PLEKHO1Q53GL0 409 aaPredicted RBP23.41■■□□□ 1.34
CBWD1-202ENST00000356521 PTF1AQ7RTS3 328 aa23.41■■□□□ 1.34
CBWD1-202ENST00000356521 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
CBWD1-202ENST00000356521 DOT1LQ8TEK3 1739 aa23.4■■□□□ 1.34
CBWD1-202ENST00000356521 KCNQ2O43526 872 aa23.39■■□□□ 1.34
CBWD1-202ENST00000356521 AMOTQ4VCS5 1084 aa23.39■■□□□ 1.34
CBWD1-202ENST00000356521 ZNF530Q6P9A1 599 aaPredicted RBP23.39■■□□□ 1.34
CBWD1-202ENST00000356521 SYTL4Q96C24 671 aaPredicted RBP23.39■■□□□ 1.33
CBWD1-202ENST00000356521 NHSQ6T4R5 1651 aa23.38■■□□□ 1.33
CBWD1-202ENST00000356521 PRKAR2BP31323 418 aa23.38■■□□□ 1.33
CBWD1-202ENST00000356521 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
CBWD1-202ENST00000356521 PHKG2P15735 406 aa23.37■■□□□ 1.33
CBWD1-202ENST00000356521 DEFB132Q7Z7B7 95 aa23.37■■□□□ 1.33
CBWD1-202ENST00000356521 IFNL2Q8IZJ0 200 aa23.37■■□□□ 1.33
CBWD1-202ENST00000356521 BCL11BQ9C0K0 894 aaPredicted RBP23.36■■□□□ 1.33
CBWD1-202ENST00000356521 APBA3O96018 575 aa23.36■■□□□ 1.33
CBWD1-202ENST00000356521 KAT6BQ8WYB5 2073 aa23.35■■□□□ 1.33
CBWD1-202ENST00000356521 BAG6P46379 1132 aa23.34■■□□□ 1.33
CBWD1-202ENST00000356521 PRIM1P49642 420 aaKnown RBP23.34■■□□□ 1.33
CBWD1-202ENST00000356521 C1orf141Q5JVX7 400 aa23.34■■□□□ 1.33
CBWD1-202ENST00000356521 TOGARAM1Q9Y4F4 1720 aa23.34■■□□□ 1.33
CBWD1-202ENST00000356521 FCHSD2O94868 740 aa23.33■■□□□ 1.33
CBWD1-202ENST00000356521 MTHFSDQ2M296 383 aaKnown RBP23.33■■□□□ 1.33
CBWD1-202ENST00000356521 EN1Q05925 392 aaPredicted RBP23.33■■□□□ 1.32
CBWD1-202ENST00000356521 PHACTR3Q96KR7 559 aa23.33■■□□□ 1.32
CBWD1-202ENST00000356521 CCDC184Q52MB2 194 aa23.32■■□□□ 1.32
CBWD1-202ENST00000356521 WDR43Q15061 677 aaKnown RBP eCLIP23.31■■□□□ 1.32
CBWD1-202ENST00000356521 NKX1-1Q15270 411 aaPredicted RBP23.31■■□□□ 1.32
CBWD1-202ENST00000356521 BTAF1O14981 1849 aa23.3■■□□□ 1.32
CBWD1-202ENST00000356521 MPRIPQ6WCQ1 1025 aa23.3■■□□□ 1.32
CBWD1-202ENST00000356521 KDM6AO15550 1401 aaPredicted RBP23.29■■□□□ 1.32
CBWD1-202ENST00000356521 HSP90AB1P08238 724 aaKnown RBP23.28■■□□□ 1.32
CBWD1-202ENST00000356521 AKAP4Q5JQC9 854 aa23.28■■□□□ 1.32
CBWD1-202ENST00000356521 DCAF5Q96JK2 942 aa23.28■■□□□ 1.32
CBWD1-202ENST00000356521 MRS2Q9HD23 443 aa23.28■■□□□ 1.32
CBWD1-202ENST00000356521 EZH2Q15910 746 aaKnown RBP23.27■■□□□ 1.32
CBWD1-202ENST00000356521 GAS2L2Q8NHY3 880 aa23.27■■□□□ 1.32
CBWD1-202ENST00000356521 NEFMP07197 916 aa23.26■■□□□ 1.31
CBWD1-202ENST00000356521 ITGB4P16144 1822 aa23.26■■□□□ 1.31
CBWD1-202ENST00000356521 MAPK8IP3Q9UPT6 1336 aa23.25■■□□□ 1.31
CBWD1-202ENST00000356521 MAP3K5Q99683 1374 aa23.25■■□□□ 1.31
CBWD1-202ENST00000356521 CAMKK2Q96RR4 588 aa23.25■■□□□ 1.31
CBWD1-202ENST00000356521 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
CBWD1-202ENST00000356521 TMOD3Q9NYL9 352 aa23.25■■□□□ 1.31
CBWD1-202ENST00000356521 ADAMTS8Q9UP79 889 aa23.25■■□□□ 1.31
CBWD1-202ENST00000356521 CCDC146Q8IYE0 955 aa23.24■■□□□ 1.31
CBWD1-202ENST00000356521 DIEXFQ68CQ4 756 aaKnown RBP23.23■■□□□ 1.31
CBWD1-202ENST00000356521 PNNQ9H307 717 aaKnown RBP23.23■■□□□ 1.31
CBWD1-202ENST00000356521 PIGBQ92521 554 aa23.22■■□□□ 1.31
CBWD1-202ENST00000356521 RGPD3A6NKT7 1758 aaPredicted RBP23.22■■□□□ 1.31
CBWD1-202ENST00000356521 RGPD4Q7Z3J3 1758 aa23.22■■□□□ 1.31
CBWD1-202ENST00000356521 SCN11AQ9UI33 1791 aa23.22■■□□□ 1.31
CBWD1-202ENST00000356521 GNAT3A8MTJ3 354 aa23.22■■□□□ 1.31
CBWD1-202ENST00000356521 PLSCR1O15162 318 aa23.22■■□□□ 1.31
CBWD1-202ENST00000356521 LGR6Q9HBX8 967 aa23.22■■□□□ 1.31
CBWD1-202ENST00000356521 ERVV-2B6SEH9 535 aa23.21■■□□□ 1.31
CBWD1-202ENST00000356521 CABP4P57796 275 aa23.21■■□□□ 1.31
CBWD1-202ENST00000356521 RNMTO43148 476 aaKnown RBP23.19■■□□□ 1.3
CBWD1-202ENST00000356521 RREB1Q92766 1687 aa23.19■■□□□ 1.3
CBWD1-202ENST00000356521 VIRMAQ69YN4 1812 aaKnown RBP23.19■■□□□ 1.3
CBWD1-202ENST00000356521 NFATC2IPQ8NCF5 419 aa23.18■■□□□ 1.3
CBWD1-202ENST00000356521 ADAMTS7Q9UKP4 1686 aa23.17■■□□□ 1.3
CBWD1-202ENST00000356521 PALLDQ8WX93 1383 aa23.17■■□□□ 1.3
CBWD1-202ENST00000356521 TXNRD1Q16881 649 aa23.17■■□□□ 1.3
CBWD1-202ENST00000356521 PROM2Q8N271 834 aa23.16■■□□□ 1.3
CBWD1-202ENST00000356521 NUP188Q5SRE5 1749 aa23.16■■□□□ 1.3
CBWD1-202ENST00000356521 NFE2L2Q16236 605 aa23.16■■□□□ 1.3
CBWD1-202ENST00000356521 MCM10Q7L590 875 aa23.16■■□□□ 1.3
CBWD1-202ENST00000356521 IL17REQ8NFR9 667 aa23.16■■□□□ 1.3
CBWD1-202ENST00000356521 PNISRQ8TF01 805 aaKnown RBP23.16■■□□□ 1.3
CBWD1-202ENST00000356521 RTF1Q92541 710 aaKnown RBP23.16■■□□□ 1.3
CBWD1-202ENST00000356521 SLC52A2Q9HAB3 445 aa23.16■■□□□ 1.3
CBWD1-202ENST00000356521 ASAP1Q9ULH1 1129 aa23.16■■□□□ 1.3
CBWD1-202ENST00000356521 MRC1P22897 1456 aa23.15■■□□□ 1.3
CBWD1-202ENST00000356521 KCNQ4P56696 695 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms