RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
NCDN-201ENST00000356090 NUDT16Q96DE0 195 aaKnown RBP16.31■□□□□ 0.2
NCDN-201ENST00000356090 LRRC7Q96NW7 1537 aa16.31■□□□□ 0.2
NCDN-201ENST00000356090 DTNBO60941 627 aa16.31■□□□□ 0.2
NCDN-201ENST00000356090 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
NCDN-201ENST00000356090 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.31■□□□□ 0.2
NCDN-201ENST00000356090 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
NCDN-201ENST00000356090 MCCP23508 829 aa16.3■□□□□ 0.2
NCDN-201ENST00000356090 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
NCDN-201ENST00000356090 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
NCDN-201ENST00000356090 KIDINS220Q9ULH0 1771 aa16.3■□□□□ 0.2
NCDN-201ENST00000356090 TPM2P07951 284 aa16.3■□□□□ 0.2
NCDN-201ENST00000356090 FKBP5Q13451 457 aaPredicted RBP16.3■□□□□ 0.2
NCDN-201ENST00000356090 ADGRB2O60241 1585 aa16.29■□□□□ 0.2
NCDN-201ENST00000356090 MSH6P52701 1360 aa16.29■□□□□ 0.2
NCDN-201ENST00000356090 HAP1P54257 671 aaPredicted RBP16.29■□□□□ 0.2
NCDN-201ENST00000356090 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
NCDN-201ENST00000356090 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
NCDN-201ENST00000356090 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
NCDN-201ENST00000356090 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
NCDN-201ENST00000356090 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
NCDN-201ENST00000356090 FOXO3O43524 673 aa16.28■□□□□ 0.2
NCDN-201ENST00000356090 G2E3Q7L622 706 aa16.28■□□□□ 0.2
NCDN-201ENST00000356090 GPT2Q8TD30 523 aa16.28■□□□□ 0.2
NCDN-201ENST00000356090 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
NCDN-201ENST00000356090 CAMSAP1Q5T5Y3 1602 aa16.28■□□□□ 0.2
NCDN-201ENST00000356090 IL1RAPL2Q9NP60 686 aa16.28■□□□□ 0.2
NCDN-201ENST00000356090 COL3A1P02461 1466 aaPredicted RBP16.28■□□□□ 0.2
NCDN-201ENST00000356090 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
NCDN-201ENST00000356090 TMX3Q96JJ7 454 aa16.28■□□□□ 0.2
NCDN-201ENST00000356090 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.2
NCDN-201ENST00000356090 TMEM63CQ9P1W3 806 aa16.27■□□□□ 0.2
NCDN-201ENST00000356090 WASLO00401 505 aaPredicted RBP16.27■□□□□ 0.19
NCDN-201ENST00000356090 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.19
NCDN-201ENST00000356090 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.19
NCDN-201ENST00000356090 ABCC3O15438 1527 aa16.27■□□□□ 0.19
NCDN-201ENST00000356090 ZFYVE9O95405 1425 aa16.26■□□□□ 0.19
NCDN-201ENST00000356090 ZNF853P0CG23 659 aa16.26■□□□□ 0.19
NCDN-201ENST00000356090 PPLO60437 1756 aa16.26■□□□□ 0.19
NCDN-201ENST00000356090 BRPF1P55201 1214 aaPredicted RBP16.26■□□□□ 0.19
NCDN-201ENST00000356090 PPP1R9BQ96SB3 815 aa16.26■□□□□ 0.19
NCDN-201ENST00000356090 PNPLA6Q8IY17 1366 aa16.26■□□□□ 0.19
NCDN-201ENST00000356090 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
NCDN-201ENST00000356090 PDE1AP54750 535 aa16.25■□□□□ 0.19
NCDN-201ENST00000356090 CCDC61Q9Y6R9 512 aa16.25■□□□□ 0.19
NCDN-201ENST00000356090 UQCRHLA0A096LP55 91 aa16.25■□□□□ 0.19
NCDN-201ENST00000356090 UQCRHP07919 91 aa16.25■□□□□ 0.19
NCDN-201ENST00000356090 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
NCDN-201ENST00000356090 IFT172Q9UG01 1749 aa16.25■□□□□ 0.19
NCDN-201ENST00000356090 PTCH1Q13635 1447 aa16.25■□□□□ 0.19
NCDN-201ENST00000356090 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
NCDN-201ENST00000356090 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
NCDN-201ENST00000356090 ZNF445P59923 1031 aa16.24■□□□□ 0.19
NCDN-201ENST00000356090 OFD1O75665 1012 aa16.23■□□□□ 0.19
NCDN-201ENST00000356090 CFAP74Q9C0B2 1584 aa16.23■□□□□ 0.19
NCDN-201ENST00000356090 GNAI2P04899 355 aa16.23■□□□□ 0.19
NCDN-201ENST00000356090 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
NCDN-201ENST00000356090 PALD1Q9ULE6 856 aa16.23■□□□□ 0.19
NCDN-201ENST00000356090 ZDHHC9Q9Y397 364 aa16.23■□□□□ 0.19
NCDN-201ENST00000356090 NUTM1Q86Y26 1132 aa16.23■□□□□ 0.19
NCDN-201ENST00000356090 LRRCC1Q9C099 1032 aa16.23■□□□□ 0.19
NCDN-201ENST00000356090 ZNF830Q96NB3 372 aaPredicted RBP16.22■□□□□ 0.19
NCDN-201ENST00000356090 LMTK2Q8IWU2 1503 aa16.22■□□□□ 0.19
NCDN-201ENST00000356090 CD163L1Q9NR16 1453 aa16.22■□□□□ 0.19
NCDN-201ENST00000356090 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
NCDN-201ENST00000356090 AMPHP49418 695 aa16.22■□□□□ 0.19
NCDN-201ENST00000356090 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
NCDN-201ENST00000356090 CHMP3Q9Y3E7 222 aa16.22■□□□□ 0.19
NCDN-201ENST00000356090 MED14O60244 1454 aa16.22■□□□□ 0.19
NCDN-201ENST00000356090 RTL1A6NKG5 1358 aa16.22■□□□□ 0.19
NCDN-201ENST00000356090 NEURL4Q96JN8 1562 aa16.22■□□□□ 0.19
NCDN-201ENST00000356090 LRSAM1Q6UWE0 723 aa16.22■□□□□ 0.19
NCDN-201ENST00000356090 NEXMIFQ5QGS0 1516 aa16.21■□□□□ 0.19
NCDN-201ENST00000356090 MX1P20591 662 aa16.21■□□□□ 0.19
NCDN-201ENST00000356090 SYAP1Q96A49 352 aaPredicted RBP16.21■□□□□ 0.19
NCDN-201ENST00000356090 TSPY26PQ9H489 355 aa16.21■□□□□ 0.19
NCDN-201ENST00000356090 YEATS2Q9ULM3 1422 aa16.21■□□□□ 0.19
NCDN-201ENST00000356090 USP32Q8NFA0 1604 aa16.2■□□□□ 0.18
NCDN-201ENST00000356090 MBD3O95983 291 aa16.2■□□□□ 0.18
NCDN-201ENST00000356090 PTPRMP28827 1452 aa16.2■□□□□ 0.18
NCDN-201ENST00000356090 EIF2S2P20042 333 aaKnown RBP16.2■□□□□ 0.18
NCDN-201ENST00000356090 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
NCDN-201ENST00000356090 DDX54Q8TDD1 881 aaKnown RBP16.2■□□□□ 0.18
NCDN-201ENST00000356090 FIBPO43427 364 aa16.19■□□□□ 0.18
NCDN-201ENST00000356090 ESYT1Q9BSJ8 1104 aa16.19■□□□□ 0.18
NCDN-201ENST00000356090 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
NCDN-201ENST00000356090 LRRFIP2Q9Y608 721 aaKnown RBP16.19■□□□□ 0.18
NCDN-201ENST00000356090 CHL1O00533 1208 aa16.19■□□□□ 0.18
NCDN-201ENST00000356090 PDCL3Q9H2J4 239 aa16.19■□□□□ 0.18
NCDN-201ENST00000356090 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
NCDN-201ENST00000356090 PNMA6EA0A0J9YXQ4 647 aa16.18■□□□□ 0.18
NCDN-201ENST00000356090 GADD45BO75293 160 aaPredicted RBP16.18■□□□□ 0.18
NCDN-201ENST00000356090 SURF6O75683 361 aaKnown RBP16.18■□□□□ 0.18
NCDN-201ENST00000356090 ZKSCAN5Q9Y2L8 839 aa16.18■□□□□ 0.18
NCDN-201ENST00000356090 CYB5RLQ6IPT4 315 aa16.18■□□□□ 0.18
NCDN-201ENST00000356090 USP25Q9UHP3 1055 aa16.18■□□□□ 0.18
NCDN-201ENST00000356090 NOL7Q9UMY1 257 aaKnown RBP16.18■□□□□ 0.18
NCDN-201ENST00000356090 MLH3Q9UHC1 1453 aa16.18■□□□□ 0.18
NCDN-201ENST00000356090 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
NCDN-201ENST00000356090 PTPRCP08575 1304 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms