RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 LOC102724159A0A0B4J2E5 919 aa15.89■□□□□ 0.13
IFT88-202ENST00000351808 PWP2Q15269 919 aaKnown RBP15.89■□□□□ 0.13
IFT88-202ENST00000351808 GTF3C6Q969F1 213 aa15.89■□□□□ 0.13
IFT88-202ENST00000351808 KIF1BPQ96EK5 621 aa15.89■□□□□ 0.13
IFT88-202ENST00000351808 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
IFT88-202ENST00000351808 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
IFT88-202ENST00000351808 GEMIN8Q9NWZ8 242 aaKnown RBP15.89■□□□□ 0.13
IFT88-202ENST00000351808 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 PLB1Q6P1J6 1458 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 SCAF11Q99590 1463 aaKnown RBP15.88■□□□□ 0.13
IFT88-202ENST00000351808 ELF2Q15723 593 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 TPD52L1Q16890 204 aaPredicted RBP15.88■□□□□ 0.13
IFT88-202ENST00000351808 CREBRFQ8IUR6 639 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 FUCA2Q9BTY2 467 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 CNPY2Q9Y2B0 182 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 NPHP1O15259 732 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 SLC52A1Q9NWF4 448 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 ZNF446Q9NWS9 450 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.88■□□□□ 0.13
IFT88-202ENST00000351808 NRBP1Q9UHY1 535 aa15.88■□□□□ 0.13
IFT88-202ENST00000351808 SDSP20132 328 aa15.87■□□□□ 0.13
IFT88-202ENST00000351808 NOP2P46087 812 aaKnown RBP15.87■□□□□ 0.13
IFT88-202ENST00000351808 OTUD7AQ8TE49 926 aaPredicted RBP15.87■□□□□ 0.13
IFT88-202ENST00000351808 RASSF4Q9H2L5 321 aa15.87■□□□□ 0.13
IFT88-202ENST00000351808 HDAC5Q9UQL6 1122 aa15.87■□□□□ 0.13
IFT88-202ENST00000351808 IQGAP1P46940 1657 aa15.87■□□□□ 0.13
IFT88-202ENST00000351808 MMP14P50281 582 aa15.86■□□□□ 0.13
IFT88-202ENST00000351808 CUL4AQ13619 759 aa15.86■□□□□ 0.13
IFT88-202ENST00000351808 CEP135Q66GS9 1140 aa15.86■□□□□ 0.13
IFT88-202ENST00000351808 DRC7Q8IY82 874 aa15.86■□□□□ 0.13
IFT88-202ENST00000351808 NEK11Q8NG66 645 aa15.86■□□□□ 0.13
IFT88-202ENST00000351808 DHX16O60231 1041 aaKnown RBP15.86■□□□□ 0.13
IFT88-202ENST00000351808 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
IFT88-202ENST00000351808 CDC42BPAQ5VT25 1732 aa15.86■□□□□ 0.13
IFT88-202ENST00000351808 REC8O95072 547 aa15.85■□□□□ 0.13
IFT88-202ENST00000351808 GYS2P54840 703 aa15.85■□□□□ 0.13
IFT88-202ENST00000351808 CASC1Q6TDU7 716 aa15.85■□□□□ 0.13
IFT88-202ENST00000351808 NFATC2IPQ8NCF5 419 aa15.85■□□□□ 0.13
IFT88-202ENST00000351808 TRIM66O15016 1216 aa15.85■□□□□ 0.13
IFT88-202ENST00000351808 PSEN1P49768 467 aa15.85■□□□□ 0.13
IFT88-202ENST00000351808 GTF2A1P52655 376 aaPredicted RBP15.85■□□□□ 0.13
IFT88-202ENST00000351808 C10orf67Q8IYJ2 551 aa15.85■□□□□ 0.13
IFT88-202ENST00000351808 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
IFT88-202ENST00000351808 SYT10Q6XYQ8 523 aa15.85■□□□□ 0.13
IFT88-202ENST00000351808 ABCC11Q96J66 1382 aa15.84■□□□□ 0.13
IFT88-202ENST00000351808 SRCIN1Q9C0H9 1055 aa15.84■□□□□ 0.13
IFT88-202ENST00000351808 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.84■□□□□ 0.13
IFT88-202ENST00000351808 KDM5AP29375 1690 aaKnown RBP15.83■□□□□ 0.13
IFT88-202ENST00000351808 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.13
IFT88-202ENST00000351808 UBE2HP62256 183 aa15.83■□□□□ 0.13
IFT88-202ENST00000351808 BMS1Q14692 1282 aaKnown RBP15.83■□□□□ 0.13
IFT88-202ENST00000351808 ZSCAN25Q6NSZ9 544 aa15.83■□□□□ 0.13
IFT88-202ENST00000351808 WDR33Q9C0J8 1336 aaKnown RBP15.83■□□□□ 0.13
IFT88-202ENST00000351808 CEP152O94986 1710 aa15.83■□□□□ 0.12
IFT88-202ENST00000351808 RAPGEF6Q8TEU7 1601 aa15.83■□□□□ 0.12
IFT88-202ENST00000351808 TMEM87AQ8NBN3 555 aa15.82■□□□□ 0.12
IFT88-202ENST00000351808 INTS4Q96HW7 963 aaKnown RBP15.82■□□□□ 0.12
IFT88-202ENST00000351808 CLTCL1P53675 1640 aa15.82■□□□□ 0.12
IFT88-202ENST00000351808 ERC2O15083 957 aa15.82■□□□□ 0.12
IFT88-202ENST00000351808 FIBPO43427 364 aa15.82■□□□□ 0.12
IFT88-202ENST00000351808 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
IFT88-202ENST00000351808 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
IFT88-202ENST00000351808 LCMT1Q9UIC8 334 aa15.82■□□□□ 0.12
IFT88-202ENST00000351808 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
IFT88-202ENST00000351808 APPP05067 770 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 MCM2P49736 904 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 KRBA2Q6ZNG9 492 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 NSD3Q9BZ95 1437 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 APBB1O00213 710 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 POLR3GO15318 223 aaPredicted RBP15.81■□□□□ 0.12
IFT88-202ENST00000351808 ERO1AQ96HE7 468 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 MYO1CO00159 1063 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 ALDH1L2Q3SY69 923 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 LUZP1Q86V48 1076 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 SIRT1Q96EB6 747 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 FHOD1Q9Y613 1164 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 ZNF518AQ6AHZ1 1483 aa15.81■□□□□ 0.12
IFT88-202ENST00000351808 MED14O60244 1454 aa15.8■□□□□ 0.12
IFT88-202ENST00000351808 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
IFT88-202ENST00000351808 SLFNL1Q499Z3 407 aa15.8■□□□□ 0.12
IFT88-202ENST00000351808 CACTINQ8WUQ7 758 aaKnown RBP15.8■□□□□ 0.12
IFT88-202ENST00000351808 USP27XA6NNY8 438 aa15.8■□□□□ 0.12
IFT88-202ENST00000351808 CD109Q6YHK3 1445 aa15.8■□□□□ 0.12
IFT88-202ENST00000351808 REREQ9P2R6 1566 aa15.8■□□□□ 0.12
IFT88-202ENST00000351808 ATAD2Q6PL18 1390 aa15.8■□□□□ 0.12
IFT88-202ENST00000351808 ERVK-7P63135 1459 aa15.79■□□□□ 0.12
IFT88-202ENST00000351808 ERBB3P21860 1342 aa15.79■□□□□ 0.12
IFT88-202ENST00000351808 CCDC192P0DO97 292 aa15.79■□□□□ 0.12
IFT88-202ENST00000351808 PLA2G4AP47712 749 aa15.79■□□□□ 0.12
IFT88-202ENST00000351808 ICE2Q659A1 982 aa15.79■□□□□ 0.12
IFT88-202ENST00000351808 PALD1Q9ULE6 856 aa15.79■□□□□ 0.12
IFT88-202ENST00000351808 CASQ1P31415 396 aa15.78■□□□□ 0.12
IFT88-202ENST00000351808 MUM1L1Q5H9M0 696 aa15.78■□□□□ 0.12
IFT88-202ENST00000351808 FAM200AQ8TCP9 573 aa15.78■□□□□ 0.12
IFT88-202ENST00000351808 TRIM5Q9C035 493 aa15.78■□□□□ 0.12
IFT88-202ENST00000351808 DCTPP1Q9H773 170 aa15.78■□□□□ 0.12
IFT88-202ENST00000351808 RPAP1Q9BWH6 1393 aaPredicted RBP15.78■□□□□ 0.12
IFT88-202ENST00000351808 UPF3BQ9BZI7 483 aaKnown RBP15.78■□□□□ 0.12
IFT88-202ENST00000351808 SLC12A5Q9H2X9 1139 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms