RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 JARID2Q92833 1246 aaPredicted RBP21.67■■□□□ 1.06
APP-202ENST00000348990 TULP4Q9NRJ4 1543 aa21.66■■□□□ 1.06
APP-202ENST00000348990 FAM177BA6PVY3 158 aa21.66■■□□□ 1.06
APP-202ENST00000348990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.66■■□□□ 1.06
APP-202ENST00000348990 MROH2AA6NES4 1674 aa21.66■■□□□ 1.06
APP-202ENST00000348990 WAPLQ7Z5K2 1190 aa21.65■■□□□ 1.06
APP-202ENST00000348990 NME9Q86XW9 330 aa21.65■■□□□ 1.06
APP-202ENST00000348990 USP25Q9UHP3 1055 aa21.65■■□□□ 1.06
APP-202ENST00000348990 ZCCHC11Q5TAX3 1644 aaKnown RBP21.65■■□□□ 1.06
APP-202ENST00000348990 NRXN1Q9ULB1 1477 aa21.65■■□□□ 1.06
APP-202ENST00000348990 NPM1P06748 294 aaKnown RBP eCLIP21.65■■□□□ 1.06
APP-202ENST00000348990 MCM5P33992 734 aa21.65■■□□□ 1.06
APP-202ENST00000348990 MIS18AQ9NYP9 233 aa21.65■■□□□ 1.06
APP-202ENST00000348990 EFCAB6Q5THR3 1501 aa21.65■■□□□ 1.06
APP-202ENST00000348990 SLC4A2P04920 1241 aa21.64■■□□□ 1.06
APP-202ENST00000348990 MCM10Q7L590 875 aa21.64■■□□□ 1.06
APP-202ENST00000348990 C17orf53Q8N3J3 647 aaPredicted RBP21.64■■□□□ 1.06
APP-202ENST00000348990 ZHX1Q9UKY1 873 aaPredicted RBP21.64■■□□□ 1.06
APP-202ENST00000348990 F6X3S4 739 aa21.64■■□□□ 1.05
APP-202ENST00000348990 GADD45BO75293 160 aaPredicted RBP21.62■■□□□ 1.05
APP-202ENST00000348990 MTERF4Q7Z6M4 381 aaKnown RBP21.62■■□□□ 1.05
APP-202ENST00000348990 TTC12Q9H892 705 aaPredicted RBP21.62■■□□□ 1.05
APP-202ENST00000348990 ADGRB1O14514 1584 aa21.62■■□□□ 1.05
APP-202ENST00000348990 PHF14O94880 888 aa21.62■■□□□ 1.05
APP-202ENST00000348990 LARP6Q9BRS8 491 aaKnown RBP21.62■■□□□ 1.05
APP-202ENST00000348990 PTCH1Q13635 1447 aa21.62■■□□□ 1.05
APP-202ENST00000348990 MED14O60244 1454 aa21.61■■□□□ 1.05
APP-202ENST00000348990 SETBP1Q9Y6X0 1596 aa21.61■■□□□ 1.05
APP-202ENST00000348990 PDE1AP54750 535 aa21.61■■□□□ 1.05
APP-202ENST00000348990 NECTIN2Q92692 538 aa21.61■■□□□ 1.05
APP-202ENST00000348990 PODXL2Q9NZ53 605 aa21.61■■□□□ 1.05
APP-202ENST00000348990 MYO3AQ8NEV4 1616 aa21.6■■□□□ 1.05
APP-202ENST00000348990 RAPGEF3O95398 923 aa21.6■■□□□ 1.05
APP-202ENST00000348990 SULT6B1Q6IMI4 303 aa21.6■■□□□ 1.05
APP-202ENST00000348990 COG3Q96JB2 828 aa21.6■■□□□ 1.05
APP-202ENST00000348990 PALD1Q9ULE6 856 aa21.6■■□□□ 1.05
APP-202ENST00000348990 DEPDC5O75140 1603 aa21.59■■□□□ 1.05
APP-202ENST00000348990 DTNBO60941 627 aa21.59■■□□□ 1.05
APP-202ENST00000348990 ADGRB3O60242 1522 aa21.59■■□□□ 1.05
APP-202ENST00000348990 ZNF853P0CG23 659 aa21.59■■□□□ 1.05
APP-202ENST00000348990 HAP1P54257 671 aaPredicted RBP21.59■■□□□ 1.05
APP-202ENST00000348990 USP48Q86UV5 1035 aa21.59■■□□□ 1.05
APP-202ENST00000348990 AEBP1Q8IUX7 1158 aa21.58■■□□□ 1.05
APP-202ENST00000348990 COL3A1P02461 1466 aaPredicted RBP21.58■■□□□ 1.05
APP-202ENST00000348990 VWDEQ8N2E2 1590 aa21.58■■□□□ 1.05
APP-202ENST00000348990 PPRC1Q5VV67 1664 aaKnown RBP21.58■■□□□ 1.05
APP-202ENST00000348990 IL13P35225 146 aa21.58■■□□□ 1.04
APP-202ENST00000348990 CBX1P83916 185 aa21.58■■□□□ 1.04
APP-202ENST00000348990 MSH6P52701 1360 aa21.58■■□□□ 1.04
APP-202ENST00000348990 PIK3R4Q99570 1358 aa21.58■■□□□ 1.04
APP-202ENST00000348990 CHD1O14646 1710 aa21.57■■□□□ 1.04
APP-202ENST00000348990 HCLS1P14317 486 aaPredicted RBP21.57■■□□□ 1.04
APP-202ENST00000348990 MCM2P49736 904 aa21.57■■□□□ 1.04
APP-202ENST00000348990 BRD1O95696 1058 aa21.57■■□□□ 1.04
APP-202ENST00000348990 LRRC7Q96NW7 1537 aa21.57■■□□□ 1.04
APP-202ENST00000348990 GLI2P10070 1586 aa21.56■■□□□ 1.04
APP-202ENST00000348990 FAM135BQ49AJ0 1406 aa21.56■■□□□ 1.04
APP-202ENST00000348990 FIBPO43427 364 aa21.56■■□□□ 1.04
APP-202ENST00000348990 ADCY5O95622 1261 aa21.56■■□□□ 1.04
APP-202ENST00000348990 MAP4K4O95819 1239 aaPredicted RBP21.56■■□□□ 1.04
APP-202ENST00000348990 PNPLA6Q8IY17 1366 aa21.55■■□□□ 1.04
APP-202ENST00000348990 NOLC1Q14978 699 aaKnown RBP eCLIP21.55■■□□□ 1.045e-7■■□□□ 11.6
APP-202ENST00000348990 ESYT1Q9BSJ8 1104 aa21.55■■□□□ 1.04
APP-202ENST00000348990 CHMP3Q9Y3E7 222 aa21.55■■□□□ 1.04
APP-202ENST00000348990 NUTM2FA1L443 756 aa21.54■■□□□ 1.04
APP-202ENST00000348990 SPC24Q8NBT2 197 aa21.54■■□□□ 1.04
APP-202ENST00000348990 NCKAP5LQ9HCH0 1330 aa21.53■■□□□ 1.04
APP-202ENST00000348990 RTL1A6NKG5 1358 aa21.53■■□□□ 1.04
APP-202ENST00000348990 IL1RAPL2Q9NP60 686 aa21.53■■□□□ 1.04
APP-202ENST00000348990 CNPY2Q9Y2B0 182 aa21.53■■□□□ 1.04
APP-202ENST00000348990 USP32Q8NFA0 1604 aa21.52■■□□□ 1.04
APP-202ENST00000348990 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.04
APP-202ENST00000348990 WDR33Q9C0J8 1336 aaKnown RBP21.52■■□□□ 1.04
APP-202ENST00000348990 G2E3Q7L622 706 aa21.52■■□□□ 1.04
APP-202ENST00000348990 ZFYVE9O95405 1425 aa21.51■■□□□ 1.03
APP-202ENST00000348990 MX1P20591 662 aa21.51■■□□□ 1.03
APP-202ENST00000348990 YTHDC2Q9H6S0 1430 aaKnown RBP21.51■■□□□ 1.03
APP-202ENST00000348990 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
APP-202ENST00000348990 MROH1Q8NDA8 1641 aa21.51■■□□□ 1.03
APP-202ENST00000348990 CHAF1AQ13111 956 aaPredicted RBP21.51■■□□□ 1.03
APP-202ENST00000348990 GNAI2P04899 355 aa21.51■■□□□ 1.03
APP-202ENST00000348990 BCL11BQ9C0K0 894 aaPredicted RBP21.51■■□□□ 1.03
APP-202ENST00000348990 HMGN5P82970 282 aaKnown RBP21.5■■□□□ 1.03
APP-202ENST00000348990 MYRIPQ8NFW9 859 aa21.5■■□□□ 1.03
APP-202ENST00000348990 RTF1Q92541 710 aaKnown RBP21.5■■□□□ 1.03
APP-202ENST00000348990 CCDC94Q9BW85 323 aaPredicted RBP21.5■■□□□ 1.03
APP-202ENST00000348990 PRDM4Q9UKN5 801 aa21.5■■□□□ 1.03
APP-202ENST00000348990 NEURL4Q96JN8 1562 aa21.5■■□□□ 1.03
APP-202ENST00000348990 FKBP5Q13451 457 aaPredicted RBP21.5■■□□□ 1.03
APP-202ENST00000348990 FBXO31Q5XUX0 539 aaPredicted RBP21.5■■□□□ 1.03
APP-202ENST00000348990 INO80Q9ULG1 1556 aaPredicted RBP21.5■■□□□ 1.03
APP-202ENST00000348990 STK31Q9BXU1 1019 aa21.5■■□□□ 1.03
APP-202ENST00000348990 TSPYL4Q9UJ04 414 aa21.5■■□□□ 1.03
APP-202ENST00000348990 KIF3AQ9Y496 699 aa21.5■■□□□ 1.03
APP-202ENST00000348990 SMAP1Q8IYB5 467 aaPredicted RBP21.49■■□□□ 1.03
APP-202ENST00000348990 SLC52A1Q9NWF4 448 aa21.49■■□□□ 1.03
APP-202ENST00000348990 PPP4R3BQ5MIZ7 849 aa21.49■■□□□ 1.03
APP-202ENST00000348990 SPDYE4A6NLX3 237 aa21.48■■□□□ 1.03
APP-202ENST00000348990 GIMAP6Q6P9H5 292 aa21.48■■□□□ 1.03
APP-202ENST00000348990 FAM184AQ8NB25 1140 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms