RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 DCTPP1Q9H773 170 aa19.11■□□□□ 0.65
LRP8-202ENST00000347547 SPTLC3Q9NUV7 552 aa19.11■□□□□ 0.65
LRP8-202ENST00000347547 PHF14O94880 888 aa19.1■□□□□ 0.65
LRP8-202ENST00000347547 RNF214Q8ND24 703 aa19.1■□□□□ 0.65
LRP8-202ENST00000347547 PNPLA6Q8IY17 1366 aa19.09■□□□□ 0.65
LRP8-202ENST00000347547 VAMP4O75379 141 aa19.09■□□□□ 0.65
LRP8-202ENST00000347547 BRD1O95696 1058 aa19.09■□□□□ 0.65
LRP8-202ENST00000347547 NOLC1Q14978 699 aaKnown RBP eCLIP19.09■□□□□ 0.65
LRP8-202ENST00000347547 CASC1Q6TDU7 716 aa19.09■□□□□ 0.65
LRP8-202ENST00000347547 ANKRD26Q9UPS8 1709 aa19.09■□□□□ 0.65
LRP8-202ENST00000347547 TMEM132EQ6IEE7 984 aa19.08■□□□□ 0.65
LRP8-202ENST00000347547 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.65
LRP8-202ENST00000347547 SPATA31D1Q6ZQQ2 1576 aa19.08■□□□□ 0.65
LRP8-202ENST00000347547 REC8O95072 547 aa19.08■□□□□ 0.64
LRP8-202ENST00000347547 DNTTIP2Q5QJE6 756 aaKnown RBP19.08■□□□□ 0.64
LRP8-202ENST00000347547 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
LRP8-202ENST00000347547 KIF3AQ9Y496 699 aa19.07■□□□□ 0.64
LRP8-202ENST00000347547 A0A0U1RQG5 324 aaPredicted RBP19.06■□□□□ 0.64
LRP8-202ENST00000347547 MCM2P49736 904 aa19.06■□□□□ 0.64
LRP8-202ENST00000347547 KNDC1Q76NI1 1749 aa19.06■□□□□ 0.64
LRP8-202ENST00000347547 FCHSD2O94868 740 aa19.05■□□□□ 0.64
LRP8-202ENST00000347547 CUL4AQ13619 759 aa19.05■□□□□ 0.64
LRP8-202ENST00000347547 KLHL34Q8N239 644 aa19.05■□□□□ 0.64
LRP8-202ENST00000347547 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
LRP8-202ENST00000347547 FAM135BQ49AJ0 1406 aa19.05■□□□□ 0.64
LRP8-202ENST00000347547 DIAPH1O60610 1272 aaKnown RBP19.04■□□□□ 0.64
LRP8-202ENST00000347547 SDSP20132 328 aa19.04■□□□□ 0.64
LRP8-202ENST00000347547 FGD1P98174 961 aa19.04■□□□□ 0.64
LRP8-202ENST00000347547 LRRC7Q96NW7 1537 aa19.04■□□□□ 0.64
LRP8-202ENST00000347547 ARHGEF28Q8N1W1 1705 aaKnown RBP19.04■□□□□ 0.64
LRP8-202ENST00000347547 PPP4R3BQ5MIZ7 849 aa19.04■□□□□ 0.64
LRP8-202ENST00000347547 RPGRIP1LQ68CZ1 1315 aa19.04■□□□□ 0.64
LRP8-202ENST00000347547 A0A1W2PP64 1363 aa19.04■□□□□ 0.64
LRP8-202ENST00000347547 CBX1P83916 185 aa19.03■□□□□ 0.64
LRP8-202ENST00000347547 ATP2B3Q16720 1220 aa19.03■□□□□ 0.64
LRP8-202ENST00000347547 INTS4Q96HW7 963 aaKnown RBP19.03■□□□□ 0.64
LRP8-202ENST00000347547 CHAMP1Q96JM3 812 aa19.03■□□□□ 0.64
LRP8-202ENST00000347547 IDI1Q13907 227 aa19.03■□□□□ 0.64
LRP8-202ENST00000347547 TMX3Q96JJ7 454 aa19.03■□□□□ 0.64
LRP8-202ENST00000347547 ERC2O15083 957 aa19.02■□□□□ 0.64
LRP8-202ENST00000347547 ZFYVE9O95405 1425 aa19.02■□□□□ 0.63
LRP8-202ENST00000347547 BCL2L12Q9HB09 334 aa19.01■□□□□ 0.63
LRP8-202ENST00000347547 IFT57Q9NWB7 429 aa19.01■□□□□ 0.63
LRP8-202ENST00000347547 SLC52A1Q9NWF4 448 aa19.01■□□□□ 0.63
LRP8-202ENST00000347547 JARID2Q92833 1246 aaPredicted RBP19.01■□□□□ 0.63
LRP8-202ENST00000347547 ATP10DQ9P241 1426 aa19.01■□□□□ 0.63
LRP8-202ENST00000347547 ANKRD44Q8N8A2 993 aa19■□□□□ 0.63
LRP8-202ENST00000347547 ANKRD7Q92527 254 aa19■□□□□ 0.63
LRP8-202ENST00000347547 TSC1Q92574 1164 aa19■□□□□ 0.63
LRP8-202ENST00000347547 ZNF853P0CG23 659 aa19■□□□□ 0.63
LRP8-202ENST00000347547 GNAI1P63096 354 aa19■□□□□ 0.63
LRP8-202ENST00000347547 FBXO31Q5XUX0 539 aaPredicted RBP19■□□□□ 0.63
LRP8-202ENST00000347547 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
LRP8-202ENST00000347547 TMEM87AQ8NBN3 555 aa18.99■□□□□ 0.63
LRP8-202ENST00000347547 DIAPH3Q9NSV4 1193 aa18.99■□□□□ 0.63
LRP8-202ENST00000347547 TAF3Q5VWG9 929 aa18.99■□□□□ 0.63
LRP8-202ENST00000347547 PDCL2Q8N4E4 241 aa18.99■□□□□ 0.63
LRP8-202ENST00000347547 TSPYL6Q8N831 410 aa18.99■□□□□ 0.63
LRP8-202ENST00000347547 GGNBP2Q9H3C7 697 aa18.99■□□□□ 0.63
LRP8-202ENST00000347547 RPAP2Q8IXW5 612 aaPredicted RBP18.98■□□□□ 0.63
LRP8-202ENST00000347547 ADCY5O95622 1261 aa18.98■□□□□ 0.63
LRP8-202ENST00000347547 NFE2L2Q16236 605 aa18.98■□□□□ 0.63
LRP8-202ENST00000347547 FYB1O15117 783 aa18.97■□□□□ 0.63
LRP8-202ENST00000347547 NUTM2DQ5VT03 806 aaPredicted RBP18.97■□□□□ 0.63
LRP8-202ENST00000347547 IL17RAQ96F46 866 aa18.97■□□□□ 0.63
LRP8-202ENST00000347547 CTIFO43310 598 aaKnown RBP18.97■□□□□ 0.63
LRP8-202ENST00000347547 CCDC183Q5T5S1 534 aa18.97■□□□□ 0.63
LRP8-202ENST00000347547 FEZ1Q99689 392 aa18.97■□□□□ 0.63
LRP8-202ENST00000347547 TTC12Q9H892 705 aaPredicted RBP18.97■□□□□ 0.63
LRP8-202ENST00000347547 USP25Q9UHP3 1055 aa18.97■□□□□ 0.63
LRP8-202ENST00000347547 RTL1A6NKG5 1358 aa18.97■□□□□ 0.63
LRP8-202ENST00000347547 TPM3P06753 285 aa18.96■□□□□ 0.63
LRP8-202ENST00000347547 OTUD7AQ8TE49 926 aaPredicted RBP18.96■□□□□ 0.63
LRP8-202ENST00000347547 ZNF830Q96NB3 372 aaPredicted RBP18.96■□□□□ 0.63
LRP8-202ENST00000347547 CABP2Q9NPB3 220 aa18.96■□□□□ 0.63
LRP8-202ENST00000347547 NEK4P51957 841 aa18.96■□□□□ 0.63
LRP8-202ENST00000347547 OSBPL3Q9H4L5 887 aa18.96■□□□□ 0.63
LRP8-202ENST00000347547 ANAPC15P60006 121 aa18.95■□□□□ 0.62
LRP8-202ENST00000347547 FOXD4L5Q5VV16 416 aaPredicted RBP18.95■□□□□ 0.62
LRP8-202ENST00000347547 FOXD4L4Q8WXT5 416 aaPredicted RBP18.95■□□□□ 0.62
LRP8-202ENST00000347547 PRKAR2BP31323 418 aa18.95■□□□□ 0.62
LRP8-202ENST00000347547 KIAA1524Q8TCG1 905 aa18.95■□□□□ 0.62
LRP8-202ENST00000347547 TWISTNBQ3B726 338 aaPredicted RBP18.94■□□□□ 0.62
LRP8-202ENST00000347547 MBIPQ9NS73 344 aa18.94■□□□□ 0.62
LRP8-202ENST00000347547 ATAD2Q6PL18 1390 aa18.94■□□□□ 0.62
LRP8-202ENST00000347547 KDM4AO75164 1064 aa18.93■□□□□ 0.62
LRP8-202ENST00000347547 GADD45BO75293 160 aaPredicted RBP18.93■□□□□ 0.62
LRP8-202ENST00000347547 CHAF1AQ13111 956 aaPredicted RBP18.93■□□□□ 0.62
LRP8-202ENST00000347547 CD163L1Q9NR16 1453 aa18.93■□□□□ 0.62
LRP8-202ENST00000347547 WDR33Q9C0J8 1336 aaKnown RBP18.93■□□□□ 0.62
LRP8-202ENST00000347547 CEP85Q6P2H3 762 aa18.93■□□□□ 0.62
LRP8-202ENST00000347547 USP48Q86UV5 1035 aa18.93■□□□□ 0.62
LRP8-202ENST00000347547 TERF2IPQ9NYB0 399 aa18.93■□□□□ 0.62
LRP8-202ENST00000347547 A2ML1A8K2U0 1454 aa18.93■□□□□ 0.62
LRP8-202ENST00000347547 SYCP1Q15431 976 aa18.92■□□□□ 0.62
LRP8-202ENST00000347547 C17orf53Q8N3J3 647 aaPredicted RBP18.92■□□□□ 0.62
LRP8-202ENST00000347547 SETD1AO15047 1707 aaKnown RBP18.92■□□□□ 0.62
LRP8-202ENST00000347547 MX1P20591 662 aa18.92■□□□□ 0.62
LRP8-202ENST00000347547 RGS12O14924 1447 aa18.92■□□□□ 0.62
LRP8-202ENST00000347547 MLECQ14165 292 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms