RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 C16orf45Q96MC5 204 aaPredicted RBP19.63■□□□□ 0.73
AP3D1-201ENST00000345016 NAIPQ13075 1403 aa19.63■□□□□ 0.73
AP3D1-201ENST00000345016 MX1P20591 662 aa19.63■□□□□ 0.73
AP3D1-201ENST00000345016 TBC1D32Q96NH3 1257 aa19.63■□□□□ 0.73
AP3D1-201ENST00000345016 BAG4O95429 457 aaKnown RBP19.62■□□□□ 0.73
AP3D1-201ENST00000345016 TNNT1P13805 278 aa19.62■□□□□ 0.73
AP3D1-201ENST00000345016 TTC39AQ5SRH9 613 aa19.62■□□□□ 0.73
AP3D1-201ENST00000345016 SCAND2PQ9GZW5 306 aaPredicted RBP19.62■□□□□ 0.73
AP3D1-201ENST00000345016 ZHX1Q9UKY1 873 aaPredicted RBP19.62■□□□□ 0.73
AP3D1-201ENST00000345016 LRPPRCP42704 1394 aaKnown RBP19.62■□□□□ 0.73
AP3D1-201ENST00000345016 URI1O94763 535 aaPredicted RBP19.62■□□□□ 0.73
AP3D1-201ENST00000345016 STIM1Q13586 685 aa19.62■□□□□ 0.73
AP3D1-201ENST00000345016 RBM33Q96EV2 1170 aaKnown RBP19.62■□□□□ 0.73
AP3D1-201ENST00000345016 C9orf84Q5VXU9 1444 aa19.61■□□□□ 0.73
AP3D1-201ENST00000345016 LUC7LQ9NQ29 371 aaKnown RBP19.61■□□□□ 0.73
AP3D1-201ENST00000345016 EPB41L2O43491 1005 aaKnown RBP19.61■□□□□ 0.73
AP3D1-201ENST00000345016 TXNDC2Q86VQ3 553 aa19.61■□□□□ 0.73
AP3D1-201ENST00000345016 CKAP2LQ8IYA6 745 aa19.61■□□□□ 0.73
AP3D1-201ENST00000345016 CGNQ9P2M7 1197 aaKnown RBP19.61■□□□□ 0.73
AP3D1-201ENST00000345016 IGHDP01880 384 aa19.61■□□□□ 0.73
AP3D1-201ENST00000345016 XRCC6P12956 609 aaKnown RBP eCLIP19.61■□□□□ 0.73
AP3D1-201ENST00000345016 RRS1Q15050 365 aaKnown RBP19.61■□□□□ 0.73
AP3D1-201ENST00000345016 NKTRP30414 1462 aaKnown RBP19.61■□□□□ 0.73
AP3D1-201ENST00000345016 PRPF40BQ6NWY9 871 aaKnown RBP19.6■□□□□ 0.73
AP3D1-201ENST00000345016 TRERF1Q96PN7 1200 aa19.6■□□□□ 0.73
AP3D1-201ENST00000345016 CLCN1P35523 988 aa19.6■□□□□ 0.73
AP3D1-201ENST00000345016 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.6■□□□□ 0.731e-6■■□□□ 12.9
AP3D1-201ENST00000345016 USP8P40818 1118 aa19.6■□□□□ 0.73
AP3D1-201ENST00000345016 FKBP4Q02790 459 aaKnown RBP eCLIP19.6■□□□□ 0.734e-6■■■□□ 18
AP3D1-201ENST00000345016 NUP133Q8WUM0 1156 aa19.6■□□□□ 0.73
AP3D1-201ENST00000345016 ERLIN2O94905 339 aa19.6■□□□□ 0.73
AP3D1-201ENST00000345016 TRMT1Q9NXH9 659 aaKnown RBP19.6■□□□□ 0.73
AP3D1-201ENST00000345016 KLHL40Q2TBA0 621 aa19.59■□□□□ 0.73
AP3D1-201ENST00000345016 PANK2Q9BZ23 570 aa19.59■□□□□ 0.73
AP3D1-201ENST00000345016 CNNM1Q9NRU3 951 aa19.59■□□□□ 0.73
AP3D1-201ENST00000345016 CLIP2Q9UDT6 1046 aa19.59■□□□□ 0.73
AP3D1-201ENST00000345016 ANKRD30BQ9BXX2 1392 aa19.59■□□□□ 0.73
AP3D1-201ENST00000345016 MCM5P33992 734 aa19.59■□□□□ 0.73
AP3D1-201ENST00000345016 DHX37Q8IY37 1157 aaKnown RBP19.59■□□□□ 0.73
AP3D1-201ENST00000345016 KRT18P05783 430 aaKnown RBP19.59■□□□□ 0.73
AP3D1-201ENST00000345016 UBE2Q2Q8WVN8 375 aa19.59■□□□□ 0.73
AP3D1-201ENST00000345016 ANO10Q9NW15 660 aa19.59■□□□□ 0.73
AP3D1-201ENST00000345016 TRIM27P14373 513 aa19.58■□□□□ 0.73
AP3D1-201ENST00000345016 ZNF530Q6P9A1 599 aaPredicted RBP19.58■□□□□ 0.73
AP3D1-201ENST00000345016 RBM27Q9P2N5 1060 aaKnown RBP19.58■□□□□ 0.72
AP3D1-201ENST00000345016 PRXQ9BXM0 1461 aa19.58■□□□□ 0.72
AP3D1-201ENST00000345016 CCDC69A6NI79 296 aa19.58■□□□□ 0.72
AP3D1-201ENST00000345016 GLRX3O76003 335 aaKnown RBP19.58■□□□□ 0.72
AP3D1-201ENST00000345016 ADCY5O95622 1261 aa19.58■□□□□ 0.72
AP3D1-201ENST00000345016 KIF1BPQ96EK5 621 aa19.58■□□□□ 0.72
AP3D1-201ENST00000345016 TANGO6Q9C0B7 1094 aa19.58■□□□□ 0.72
AP3D1-201ENST00000345016 PPP4R3BQ5MIZ7 849 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 TBC1D9Q6ZT07 1266 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 NSD3Q9BZ95 1437 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 POLR3GO15318 223 aaPredicted RBP19.57■□□□□ 0.72
AP3D1-201ENST00000345016 CRACR2AQ9BSW2 395 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 MIS18AQ9NYP9 233 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 PRDM2Q13029 1718 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 CDKL5O76039 1030 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 NACAP1Q9BZK3 213 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 NEFHP12036 1026 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 ZNF692Q9BU19 519 aaPredicted RBP19.57■□□□□ 0.72
AP3D1-201ENST00000345016 CTNNA3Q9UI47 895 aa19.57■□□□□ 0.72
AP3D1-201ENST00000345016 IKQ13123 557 aaPredicted RBP19.56■□□□□ 0.72
AP3D1-201ENST00000345016 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
AP3D1-201ENST00000345016 RAB11FIP3O75154 756 aa19.56■□□□□ 0.72
AP3D1-201ENST00000345016 ALDH1L2Q3SY69 923 aa19.56■□□□□ 0.72
AP3D1-201ENST00000345016 LARP6Q9BRS8 491 aaKnown RBP19.56■□□□□ 0.72
AP3D1-201ENST00000345016 SPDYE4A6NLX3 237 aa19.56■□□□□ 0.72
AP3D1-201ENST00000345016 DYNC1I1O14576 645 aa19.56■□□□□ 0.72
AP3D1-201ENST00000345016 MYL6BP14649 208 aa19.56■□□□□ 0.72
AP3D1-201ENST00000345016 BMP2KLQ5H9B9 411 aa19.56■□□□□ 0.72
AP3D1-201ENST00000345016 ZSCAN12O43309 604 aa19.56■□□□□ 0.72
AP3D1-201ENST00000345016 TAX1BP1Q86VP1 789 aa19.56■□□□□ 0.72
AP3D1-201ENST00000345016 AQRO60306 1485 aaKnown RBP eCLIP19.55■□□□□ 0.728e-7■■■■■ 29.8
AP3D1-201ENST00000345016 GOLGA6L7A0A1B0GV03 622 aa19.55■□□□□ 0.72
AP3D1-201ENST00000345016 LIMCH1Q9UPQ0 1083 aa19.55■□□□□ 0.72
AP3D1-201ENST00000345016 GBP3Q9H0R5 595 aa19.55■□□□□ 0.72
AP3D1-201ENST00000345016 SLC3A2P08195 630 aaKnown RBP19.55■□□□□ 0.72
AP3D1-201ENST00000345016 ZHX3Q9H4I2 956 aa19.55■□□□□ 0.72
AP3D1-201ENST00000345016 SH2B1Q9NRF2 756 aaPredicted RBP19.55■□□□□ 0.72
AP3D1-201ENST00000345016 NOL7Q9UMY1 257 aaKnown RBP19.54■□□□□ 0.72
AP3D1-201ENST00000345016 CALCOCO1Q9P1Z2 691 aa19.54■□□□□ 0.72
AP3D1-201ENST00000345016 CEP126Q9P2H0 1117 aa19.54■□□□□ 0.72
AP3D1-201ENST00000345016 TFIP11Q9UBB9 837 aaKnown RBP19.54■□□□□ 0.72
AP3D1-201ENST00000345016 TIAM1Q13009 1591 aa19.54■□□□□ 0.72
AP3D1-201ENST00000345016 ARHGAP5Q13017 1502 aa19.54■□□□□ 0.72
AP3D1-201ENST00000345016 EIF5P55010 431 aaKnown RBP19.54■□□□□ 0.72
AP3D1-201ENST00000345016 SYCP1Q15431 976 aa19.54■□□□□ 0.72
AP3D1-201ENST00000345016 KIF4BQ2VIQ3 1234 aa19.54■□□□□ 0.72
AP3D1-201ENST00000345016 IQCEQ6IPM2 695 aa19.54■□□□□ 0.72
AP3D1-201ENST00000345016 KIAA1328Q86T90 577 aa19.54■□□□□ 0.72
AP3D1-201ENST00000345016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.53■□□□□ 0.723e-6■■□□□ 13.8
AP3D1-201ENST00000345016 MCM10Q7L590 875 aa19.53■□□□□ 0.72
AP3D1-201ENST00000345016 HCLS1P14317 486 aaPredicted RBP19.52■□□□□ 0.72
AP3D1-201ENST00000345016 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.72
AP3D1-201ENST00000345016 TXLNBQ8N3L3 684 aa19.52■□□□□ 0.72
AP3D1-201ENST00000345016 TOP1P11387 765 aaKnown RBP19.52■□□□□ 0.72
AP3D1-201ENST00000345016 DAPK1P53355 1430 aa19.52■□□□□ 0.71
AP3D1-201ENST00000345016 NCOA1Q15788 1441 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms