RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 TBX22Q9Y458 520 aa19.63■□□□□ 0.73
PDE8B-204ENST00000342343 USP31Q70CQ4 1352 aa19.63■□□□□ 0.73
PDE8B-204ENST00000342343 CHL1O00533 1208 aa19.63■□□□□ 0.73
PDE8B-204ENST00000342343 HSCBQ8IWL3 235 aa19.62■□□□□ 0.73
PDE8B-204ENST00000342343 NALCNQ8IZF0 1738 aa19.61■□□□□ 0.73
PDE8B-204ENST00000342343 RIMS1Q86UR5 1692 aaKnown RBP19.61■□□□□ 0.73
PDE8B-204ENST00000342343 DDX11L8A8MPP1 907 aa19.6■□□□□ 0.73
PDE8B-204ENST00000342343 MTHFSDQ2M296 383 aaKnown RBP19.6■□□□□ 0.73
PDE8B-204ENST00000342343 API5Q9BZZ5 524 aaKnown RBP19.6■□□□□ 0.73
PDE8B-204ENST00000342343 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
PDE8B-204ENST00000342343 KCNA6P17658 529 aa19.59■□□□□ 0.73
PDE8B-204ENST00000342343 SLIT1O75093 1534 aa19.59■□□□□ 0.73
PDE8B-204ENST00000342343 THEMISQ8N1K5 641 aaPredicted RBP19.59■□□□□ 0.73
PDE8B-204ENST00000342343 NAP1L5Q96NT1 182 aaPredicted RBP19.59■□□□□ 0.73
PDE8B-204ENST00000342343 RGPD1P0DJD0 1748 aa19.58■□□□□ 0.73
PDE8B-204ENST00000342343 GCC1Q96CN9 775 aa19.58■□□□□ 0.73
PDE8B-204ENST00000342343 RBM33Q96EV2 1170 aaKnown RBP19.58■□□□□ 0.73
PDE8B-204ENST00000342343 EYA1Q99502 592 aa19.58■□□□□ 0.73
PDE8B-204ENST00000342343 DIP2AQ14689 1571 aa19.58■□□□□ 0.72
PDE8B-204ENST00000342343 AMPHP49418 695 aa19.58■□□□□ 0.72
PDE8B-204ENST00000342343 ISY1Q9ULR0 285 aaKnown RBP19.58■□□□□ 0.72
PDE8B-204ENST00000342343 NLRP6P59044 892 aa19.57■□□□□ 0.72
PDE8B-204ENST00000342343 TTC21AQ8NDW8 1320 aa19.57■□□□□ 0.72
PDE8B-204ENST00000342343 CRB1P82279 1406 aa19.57■□□□□ 0.72
PDE8B-204ENST00000342343 GRPEL1Q9HAV7 217 aa19.57■□□□□ 0.72
PDE8B-204ENST00000342343 RGS12O14924 1447 aa19.56■□□□□ 0.72
PDE8B-204ENST00000342343 FER1L4A9Z1Z3 1794 aa19.55■□□□□ 0.72
PDE8B-204ENST00000342343 CHMP4BQ9H444 224 aaKnown RBP19.55■□□□□ 0.72
PDE8B-204ENST00000342343 FLT4P35916 1363 aa19.54■□□□□ 0.72
PDE8B-204ENST00000342343 CEP170BQ9Y4F5 1589 aaPredicted RBP19.54■□□□□ 0.72
PDE8B-204ENST00000342343 INTS3Q68E01 1043 aaKnown RBP19.54■□□□□ 0.72
PDE8B-204ENST00000342343 SBNO1A3KN83 1393 aa19.54■□□□□ 0.72
PDE8B-204ENST00000342343 SLC4A2P04920 1241 aa19.54■□□□□ 0.72
PDE8B-204ENST00000342343 BMP2KLQ5H9B9 411 aa19.54■□□□□ 0.72
PDE8B-204ENST00000342343 RBM25P49756 843 aaKnown RBP19.53■□□□□ 0.72
PDE8B-204ENST00000342343 G2E3Q7L622 706 aa19.53■□□□□ 0.72
PDE8B-204ENST00000342343 SNX21Q969T3 373 aa19.53■□□□□ 0.72
PDE8B-204ENST00000342343 ARHGEF10O15013 1369 aa19.53■□□□□ 0.72
PDE8B-204ENST00000342343 PIK3C2AO00443 1686 aa19.53■□□□□ 0.72
PDE8B-204ENST00000342343 DDIT3P35638 169 aa19.53■□□□□ 0.72
PDE8B-204ENST00000342343 C16orf71Q8IYS4 520 aaPredicted RBP19.53■□□□□ 0.72
PDE8B-204ENST00000342343 LTV1Q96GA3 475 aaPredicted RBP19.52■□□□□ 0.72
PDE8B-204ENST00000342343 TSPYL4Q9UJ04 414 aa19.52■□□□□ 0.72
PDE8B-204ENST00000342343 FMN2Q9NZ56 1722 aa19.52■□□□□ 0.72
PDE8B-204ENST00000342343 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
PDE8B-204ENST00000342343 MEIS3Q99687 375 aa19.51■□□□□ 0.71
PDE8B-204ENST00000342343 KIAA0232Q92628 1395 aa19.51■□□□□ 0.71
PDE8B-204ENST00000342343 MSH6P52701 1360 aa19.51■□□□□ 0.71
PDE8B-204ENST00000342343 IGSF1Q8N6C5 1336 aa19.51■□□□□ 0.71
PDE8B-204ENST00000342343 F6X3S4 739 aa19.5■□□□□ 0.71
PDE8B-204ENST00000342343 APBB1O00213 710 aa19.5■□□□□ 0.71
PDE8B-204ENST00000342343 GLIPR1L2Q4G1C9 344 aa19.5■□□□□ 0.71
PDE8B-204ENST00000342343 CIZ1Q9ULV3 898 aaPredicted RBP19.5■□□□□ 0.71
PDE8B-204ENST00000342343 KDRP35968 1356 aa19.5■□□□□ 0.71
PDE8B-204ENST00000342343 ESPNB1AK53 854 aa19.49■□□□□ 0.71
PDE8B-204ENST00000342343 TBC1D9Q6ZT07 1266 aa19.49■□□□□ 0.71
PDE8B-204ENST00000342343 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
PDE8B-204ENST00000342343 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
PDE8B-204ENST00000342343 OTUD7AQ8TE49 926 aaPredicted RBP19.49■□□□□ 0.71
PDE8B-204ENST00000342343 TNPO1Q92973 898 aaKnown RBP19.49■□□□□ 0.71
PDE8B-204ENST00000342343 DCTPP1Q9H773 170 aa19.49■□□□□ 0.71
PDE8B-204ENST00000342343 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
PDE8B-204ENST00000342343 HSP90AA1P07900 732 aaKnown RBP19.49■□□□□ 0.71
PDE8B-204ENST00000342343 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
PDE8B-204ENST00000342343 HOXC9P31274 260 aa19.49■□□□□ 0.71
PDE8B-204ENST00000342343 GBP4Q96PP9 640 aa19.49■□□□□ 0.71
PDE8B-204ENST00000342343 ATP10DQ9P241 1426 aa19.49■□□□□ 0.71
PDE8B-204ENST00000342343 GSPT1P15170 499 aaKnown RBP19.48■□□□□ 0.71
PDE8B-204ENST00000342343 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
PDE8B-204ENST00000342343 CEP85Q6P2H3 762 aa19.48■□□□□ 0.71
PDE8B-204ENST00000342343 PLEKHM2Q8IWE5 1019 aa19.48■□□□□ 0.71
PDE8B-204ENST00000342343 USHBP1Q8N6Y0 703 aa19.48■□□□□ 0.71
PDE8B-204ENST00000342343 NECTIN2Q92692 538 aa19.48■□□□□ 0.71
PDE8B-204ENST00000342343 SMARCA5O60264 1052 aaPredicted RBP19.48■□□□□ 0.71
PDE8B-204ENST00000342343 HSP90AB1P08238 724 aaKnown RBP19.48■□□□□ 0.71
PDE8B-204ENST00000342343 SLC4A10Q6U841 1118 aa19.48■□□□□ 0.71
PDE8B-204ENST00000342343 ANKRD44Q8N8A2 993 aa19.48■□□□□ 0.71
PDE8B-204ENST00000342343 SKOR2Q2VWA4 1001 aaPredicted RBP19.47■□□□□ 0.71
PDE8B-204ENST00000342343 TRIM44Q96DX7 344 aaPredicted RBP19.47■□□□□ 0.71
PDE8B-204ENST00000342343 RTL1A6NKG5 1358 aa19.46■□□□□ 0.71
PDE8B-204ENST00000342343 KIF24Q5T7B8 1368 aa19.46■□□□□ 0.71
PDE8B-204ENST00000342343 KIF2CQ99661 725 aa19.46■□□□□ 0.71
PDE8B-204ENST00000342343 PTMSP20962 102 aa19.45■□□□□ 0.7
PDE8B-204ENST00000342343 HAP1P54257 671 aaPredicted RBP19.45■□□□□ 0.7
PDE8B-204ENST00000342343 RAB3GAP1Q15042 981 aa19.45■□□□□ 0.7
PDE8B-204ENST00000342343 PTPRCP08575 1304 aa19.45■□□□□ 0.7
PDE8B-204ENST00000342343 HSP90AA2PQ14568 343 aaPredicted RBP19.45■□□□□ 0.7
PDE8B-204ENST00000342343 GAS2L2Q8NHY3 880 aa19.45■□□□□ 0.7
PDE8B-204ENST00000342343 SETD1BQ9UPS6 1966 aaKnown RBP19.45■□□□□ 0.7
PDE8B-204ENST00000342343 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
PDE8B-204ENST00000342343 MARF1Q9Y4F3 1742 aaKnown RBP19.44■□□□□ 0.7
PDE8B-204ENST00000342343 RRP9O43818 475 aaKnown RBP19.43■□□□□ 0.7
PDE8B-204ENST00000342343 PLEKHG5O94827 1062 aa19.43■□□□□ 0.7
PDE8B-204ENST00000342343 CD2BP2O95400 341 aaKnown RBP19.43■□□□□ 0.7
PDE8B-204ENST00000342343 GAS2L3Q86XJ1 694 aa19.43■□□□□ 0.7
PDE8B-204ENST00000342343 IL17REQ8NFR9 667 aa19.43■□□□□ 0.7
PDE8B-204ENST00000342343 GNAT3A8MTJ3 354 aa19.42■□□□□ 0.7
PDE8B-204ENST00000342343 RPAP2Q8IXW5 612 aaPredicted RBP19.42■□□□□ 0.7
PDE8B-204ENST00000342343 ERBB4Q15303 1308 aa19.41■□□□□ 0.7
PDE8B-204ENST00000342343 ANKARQ7Z5J8 1434 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms