RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 CDC42BPAQ5VT25 1732 aa16.3■□□□□ 0.2
TMEM248-201ENST00000341567 XRCC6P12956 609 aaKnown RBP eCLIP16.3■□□□□ 0.2
TMEM248-201ENST00000341567 PPIP5K1Q6PFW1 1433 aa16.3■□□□□ 0.2
TMEM248-201ENST00000341567 ERC2O15083 957 aa16.29■□□□□ 0.2
TMEM248-201ENST00000341567 TTC37Q6PGP7 1564 aa16.29■□□□□ 0.2
TMEM248-201ENST00000341567 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
TMEM248-201ENST00000341567 SF3A1Q15459 793 aaKnown RBP16.29■□□□□ 0.2
TMEM248-201ENST00000341567 FLIIQ13045 1269 aa16.28■□□□□ 0.2
TMEM248-201ENST00000341567 HSP90AB4PQ58FF6 505 aa16.28■□□□□ 0.2
TMEM248-201ENST00000341567 ZMYM3Q14202 1370 aa16.28■□□□□ 0.2
TMEM248-201ENST00000341567 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
TMEM248-201ENST00000341567 CCDC173Q0VFZ6 552 aa16.28■□□□□ 0.2
TMEM248-201ENST00000341567 MYO5CQ9NQX4 1742 aa16.28■□□□□ 0.2
TMEM248-201ENST00000341567 SLC39A6Q13433 755 aa16.28■□□□□ 0.2
TMEM248-201ENST00000341567 SMC3Q9UQE7 1217 aa16.28■□□□□ 0.2
TMEM248-201ENST00000341567 AACSQ86V21 672 aa16.27■□□□□ 0.2
TMEM248-201ENST00000341567 UGGT1Q9NYU2 1555 aa16.27■□□□□ 0.2
TMEM248-201ENST00000341567 KRT28Q7Z3Y7 464 aa16.27■□□□□ 0.2
TMEM248-201ENST00000341567 CREBRFQ8IUR6 639 aa16.27■□□□□ 0.2
TMEM248-201ENST00000341567 PREX2Q70Z35 1606 aa16.27■□□□□ 0.19
TMEM248-201ENST00000341567 SSFA2P28290 1259 aa16.27■□□□□ 0.19
TMEM248-201ENST00000341567 TNPO1Q92973 898 aaKnown RBP16.27■□□□□ 0.19
TMEM248-201ENST00000341567 YEATS2Q9ULM3 1422 aa16.27■□□□□ 0.19
TMEM248-201ENST00000341567 STK3Q13188 491 aa16.27■□□□□ 0.19
TMEM248-201ENST00000341567 CSPP1Q1MSJ5 1256 aa16.27■□□□□ 0.19
TMEM248-201ENST00000341567 MTHFSDQ2M296 383 aaKnown RBP16.27■□□□□ 0.19
TMEM248-201ENST00000341567 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.19
TMEM248-201ENST00000341567 CNTROBQ8N137 903 aa16.27■□□□□ 0.19
TMEM248-201ENST00000341567 TBC1D32Q96NH3 1257 aa16.27■□□□□ 0.19
TMEM248-201ENST00000341567 PI4KAP2A4QPH2 592 aa16.26■□□□□ 0.19
TMEM248-201ENST00000341567 PI4KAP1Q8N8J0 262 aa16.26■□□□□ 0.19
TMEM248-201ENST00000341567 RPAP2Q8IXW5 612 aaPredicted RBP16.26■□□□□ 0.19
TMEM248-201ENST00000341567 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
TMEM248-201ENST00000341567 RABEP1Q15276 862 aa16.25■□□□□ 0.19
TMEM248-201ENST00000341567 ATP5J2-PTCD1G3V325 749 aa16.25■□□□□ 0.19
TMEM248-201ENST00000341567 FIBPO43427 364 aa16.25■□□□□ 0.19
TMEM248-201ENST00000341567 TPM2P07951 284 aa16.25■□□□□ 0.19
TMEM248-201ENST00000341567 ARHGEF12Q9NZN5 1544 aa16.25■□□□□ 0.19
TMEM248-201ENST00000341567 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
TMEM248-201ENST00000341567 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
TMEM248-201ENST00000341567 CCDC8Q9H0W5 538 aaPredicted RBP16.24■□□□□ 0.19
TMEM248-201ENST00000341567 MTMR7Q9Y216 660 aa16.24■□□□□ 0.19
TMEM248-201ENST00000341567 POLR3AO14802 1390 aaPredicted RBP16.24■□□□□ 0.19
TMEM248-201ENST00000341567 NPATQ14207 1427 aa16.24■□□□□ 0.19
TMEM248-201ENST00000341567 SPG7Q9UQ90 795 aa16.24■□□□□ 0.19
TMEM248-201ENST00000341567 ATP6V1DQ9Y5K8 247 aa16.24■□□□□ 0.19
TMEM248-201ENST00000341567 ATP7AQ04656 1500 aa16.24■□□□□ 0.19
TMEM248-201ENST00000341567 EYA1Q99502 592 aa16.24■□□□□ 0.19
TMEM248-201ENST00000341567 ABCC11Q96J66 1382 aa16.23■□□□□ 0.19
TMEM248-201ENST00000341567 MAP3K19Q56UN5 1328 aa16.23■□□□□ 0.19
TMEM248-201ENST00000341567 VAMP4O75379 141 aa16.23■□□□□ 0.19
TMEM248-201ENST00000341567 VPS37DQ86XT2 251 aa16.23■□□□□ 0.19
TMEM248-201ENST00000341567 YTHDC2Q9H6S0 1430 aaKnown RBP16.23■□□□□ 0.19
TMEM248-201ENST00000341567 BECN2A8MW95 431 aa16.23■□□□□ 0.19
TMEM248-201ENST00000341567 RRP9O43818 475 aaKnown RBP16.23■□□□□ 0.19
TMEM248-201ENST00000341567 ZNF771Q7L3S4 317 aaPredicted RBP16.23■□□□□ 0.19
TMEM248-201ENST00000341567 LTKP29376 864 aa16.23■□□□□ 0.19
TMEM248-201ENST00000341567 BOLA2Q9H3K6 86 aa16.23■□□□□ 0.19
TMEM248-201ENST00000341567 CEBPZQ03701 1054 aaKnown RBP16.22■□□□□ 0.19
TMEM248-201ENST00000341567 SPC24Q8NBT2 197 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 DDX17Q92841 729 aaKnown RBP16.22■□□□□ 0.19
TMEM248-201ENST00000341567 NINLQ9Y2I6 1382 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 A0A0U1RQG5 324 aaPredicted RBP16.22■□□□□ 0.19
TMEM248-201ENST00000341567 SYCE3A1L190 88 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 GOLGA6L19H0YKK7 550 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 CPLX1O14810 134 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 FKBP4Q02790 459 aaKnown RBP eCLIP16.22■□□□□ 0.19
TMEM248-201ENST00000341567 BICD2Q8TD16 824 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 MYD88Q99836 296 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 RIMBP3CA6NJZ7 1639 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 RIMBP3BA6NNM3 1639 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 RIMBP3Q9UFD9 1639 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 SAMD9LQ8IVG5 1584 aa16.22■□□□□ 0.19
TMEM248-201ENST00000341567 HTATSF1O43719 755 aaKnown RBP16.21■□□□□ 0.19
TMEM248-201ENST00000341567 RNF20Q5VTR2 975 aa16.21■□□□□ 0.19
TMEM248-201ENST00000341567 ANKRD24Q8TF21 1146 aa16.21■□□□□ 0.19
TMEM248-201ENST00000341567 ZSCAN30Q86W11 494 aa16.21■□□□□ 0.19
TMEM248-201ENST00000341567 ORAI2Q96SN7 254 aa16.21■□□□□ 0.19
TMEM248-201ENST00000341567 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
TMEM248-201ENST00000341567 UQCRHLA0A096LP55 91 aa16.21■□□□□ 0.19
TMEM248-201ENST00000341567 UQCRHP07919 91 aa16.21■□□□□ 0.19
TMEM248-201ENST00000341567 MAGI2Q86UL8 1455 aa16.21■□□□□ 0.19
TMEM248-201ENST00000341567 RNF123Q5XPI4 1314 aa16.21■□□□□ 0.18
TMEM248-201ENST00000341567 G3V3G9 751 aa16.21■□□□□ 0.18
TMEM248-201ENST00000341567 RAD21O60216 631 aa16.21■□□□□ 0.18
TMEM248-201ENST00000341567 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.18
TMEM248-201ENST00000341567 ZBTB3Q9H5J0 574 aa16.21■□□□□ 0.18
TMEM248-201ENST00000341567 PLA2R1Q13018 1463 aa16.2■□□□□ 0.18
TMEM248-201ENST00000341567 PPFIA3O75145 1194 aa16.2■□□□□ 0.18
TMEM248-201ENST00000341567 TBC1D9Q6ZT07 1266 aa16.2■□□□□ 0.18
TMEM248-201ENST00000341567 NSD2O96028 1365 aa16.2■□□□□ 0.18
TMEM248-201ENST00000341567 ARHGEF5Q12774 1597 aa16.2■□□□□ 0.18
TMEM248-201ENST00000341567 G2E3Q7L622 706 aa16.2■□□□□ 0.18
TMEM248-201ENST00000341567 PPP6R1Q9UPN7 881 aa16.2■□□□□ 0.18
TMEM248-201ENST00000341567 CDC42BPBQ9Y5S2 1711 aa16.2■□□□□ 0.18
TMEM248-201ENST00000341567 MX1P20591 662 aa16.2■□□□□ 0.18
TMEM248-201ENST00000341567 RRAGDQ9NQL2 400 aaPredicted RBP16.2■□□□□ 0.18
TMEM248-201ENST00000341567 DNAAF4Q8WXU2 420 aa16.19■□□□□ 0.18
TMEM248-201ENST00000341567 CHPF2Q9P2E5 772 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms