RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 TTC21AQ8NDW8 1320 aa16.77■□□□□ 0.28
SECISBP2-201ENST00000339901 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
SECISBP2-201ENST00000339901 KDRP35968 1356 aa16.76■□□□□ 0.27
SECISBP2-201ENST00000339901 PLEKHM2Q8IWE5 1019 aa16.76■□□□□ 0.27
SECISBP2-201ENST00000339901 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
SECISBP2-201ENST00000339901 CDC45O75419 566 aa16.75■□□□□ 0.27
SECISBP2-201ENST00000339901 LTKP29376 864 aa16.75■□□□□ 0.27
SECISBP2-201ENST00000339901 GSPT1P15170 499 aaKnown RBP16.75■□□□□ 0.27
SECISBP2-201ENST00000339901 SPRYD3Q8NCJ5 442 aa16.75■□□□□ 0.27
SECISBP2-201ENST00000339901 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
SECISBP2-201ENST00000339901 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
SECISBP2-201ENST00000339901 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
SECISBP2-201ENST00000339901 DDX11L8A8MPP1 907 aa16.74■□□□□ 0.27
SECISBP2-201ENST00000339901 MARF1Q9Y4F3 1742 aaKnown RBP16.74■□□□□ 0.27
SECISBP2-201ENST00000339901 SBNO1A3KN83 1393 aa16.73■□□□□ 0.27
SECISBP2-201ENST00000339901 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
SECISBP2-201ENST00000339901 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
SECISBP2-201ENST00000339901 CEP85Q6P2H3 762 aa16.73■□□□□ 0.27
SECISBP2-201ENST00000339901 XRN1Q8IZH2 1706 aaKnown RBP16.73■□□□□ 0.27
SECISBP2-201ENST00000339901 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
SECISBP2-201ENST00000339901 FAM43AQ8N2R8 423 aa16.72■□□□□ 0.27
SECISBP2-201ENST00000339901 MSH6P52701 1360 aa16.72■□□□□ 0.27
SECISBP2-201ENST00000339901 RAB3GAP1Q15042 981 aa16.72■□□□□ 0.27
SECISBP2-201ENST00000339901 MCM10Q7L590 875 aa16.72■□□□□ 0.27
SECISBP2-201ENST00000339901 FLT4P35916 1363 aa16.72■□□□□ 0.27
SECISBP2-201ENST00000339901 TRAK2O60296 914 aa16.72■□□□□ 0.27
SECISBP2-201ENST00000339901 RTN4Q9NQC3 1192 aaKnown RBP16.72■□□□□ 0.27
SECISBP2-201ENST00000339901 FAM208AQ9UK61 1670 aaKnown RBP16.7■□□□□ 0.26
SECISBP2-201ENST00000339901 K7ELQ4 463 aaPredicted RBP16.7■□□□□ 0.26
SECISBP2-201ENST00000339901 KRT24Q2M2I5 525 aa16.7■□□□□ 0.26
SECISBP2-201ENST00000339901 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
SECISBP2-201ENST00000339901 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
SECISBP2-201ENST00000339901 CACNA1FO60840 1977 aa16.7■□□□□ 0.26
SECISBP2-201ENST00000339901 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
SECISBP2-201ENST00000339901 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
SECISBP2-201ENST00000339901 CD2BP2O95400 341 aaKnown RBP16.69■□□□□ 0.26
SECISBP2-201ENST00000339901 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
SECISBP2-201ENST00000339901 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
SECISBP2-201ENST00000339901 CEP170BQ9Y4F5 1589 aaPredicted RBP16.69■□□□□ 0.26
SECISBP2-201ENST00000339901 HTATSF1O43719 755 aaKnown RBP16.68■□□□□ 0.26
SECISBP2-201ENST00000339901 TNPO1Q92973 898 aaKnown RBP16.68■□□□□ 0.26
SECISBP2-201ENST00000339901 ISY1Q9ULR0 285 aaKnown RBP16.68■□□□□ 0.26
SECISBP2-201ENST00000339901 ANKARQ7Z5J8 1434 aa16.68■□□□□ 0.26
SECISBP2-201ENST00000339901 GOLGA6L3A6NEY3 463 aa16.68■□□□□ 0.26
SECISBP2-201ENST00000339901 PTMSP20962 102 aa16.68■□□□□ 0.26
SECISBP2-201ENST00000339901 NWD1Q149M9 1564 aa16.68■□□□□ 0.26
SECISBP2-201ENST00000339901 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
SECISBP2-201ENST00000339901 XRCC6P12956 609 aaKnown RBP eCLIP16.66■□□□□ 0.26
SECISBP2-201ENST00000339901 USP26Q9BXU7 913 aa16.66■□□□□ 0.26
SECISBP2-201ENST00000339901 OSBPL3Q9H4L5 887 aa16.66■□□□□ 0.26
SECISBP2-201ENST00000339901 RABEP1Q15276 862 aa16.66■□□□□ 0.26
SECISBP2-201ENST00000339901 AMOTL2Q9Y2J4 779 aa16.66■□□□□ 0.26
SECISBP2-201ENST00000339901 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
SECISBP2-201ENST00000339901 MEIS3Q99687 375 aa16.65■□□□□ 0.26
SECISBP2-201ENST00000339901 SOS1Q07889 1333 aaPredicted RBP16.65■□□□□ 0.26
SECISBP2-201ENST00000339901 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
SECISBP2-201ENST00000339901 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
SECISBP2-201ENST00000339901 C16orf71Q8IYS4 520 aaPredicted RBP16.65■□□□□ 0.26
SECISBP2-201ENST00000339901 GBP4Q96PP9 640 aa16.65■□□□□ 0.26
SECISBP2-201ENST00000339901 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
SECISBP2-201ENST00000339901 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
SECISBP2-201ENST00000339901 SKOR2Q2VWA4 1001 aaPredicted RBP16.63■□□□□ 0.25
SECISBP2-201ENST00000339901 EYA1Q99502 592 aa16.63■□□□□ 0.25
SECISBP2-201ENST00000339901 SDSP20132 328 aa16.63■□□□□ 0.25
SECISBP2-201ENST00000339901 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
SECISBP2-201ENST00000339901 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
SECISBP2-201ENST00000339901 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
SECISBP2-201ENST00000339901 TSPYL4Q9UJ04 414 aa16.63■□□□□ 0.25
SECISBP2-201ENST00000339901 FER1L4A9Z1Z3 1794 aa16.63■□□□□ 0.25
SECISBP2-201ENST00000339901 PXDNLA1KZ92 1463 aa16.62■□□□□ 0.25
SECISBP2-201ENST00000339901 FOXO3O43524 673 aa16.62■□□□□ 0.25
SECISBP2-201ENST00000339901 HMMRO75330 724 aa16.62■□□□□ 0.25
SECISBP2-201ENST00000339901 MRE11P49959 708 aa16.62■□□□□ 0.25
SECISBP2-201ENST00000339901 OTUD7AQ8TE49 926 aaPredicted RBP16.62■□□□□ 0.25
SECISBP2-201ENST00000339901 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
SECISBP2-201ENST00000339901 SALL3Q9BXA9 1300 aa16.6■□□□□ 0.25
SECISBP2-201ENST00000339901 G2E3Q7L622 706 aa16.6■□□□□ 0.25
SECISBP2-201ENST00000339901 CASC1Q6TDU7 716 aa16.6■□□□□ 0.25
SECISBP2-201ENST00000339901 MIS18AQ9NYP9 233 aa16.59■□□□□ 0.25
SECISBP2-201ENST00000339901 GZF1Q9H116 711 aaPredicted RBP16.59■□□□□ 0.25
SECISBP2-201ENST00000339901 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.25
SECISBP2-201ENST00000339901 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.24
SECISBP2-201ENST00000339901 AMPHP49418 695 aa16.58■□□□□ 0.24
SECISBP2-201ENST00000339901 NGDNQ8NEJ9 315 aaKnown RBP16.58■□□□□ 0.24
SECISBP2-201ENST00000339901 MED1Q15648 1581 aaPredicted RBP16.58■□□□□ 0.24
SECISBP2-201ENST00000339901 GNAI2P04899 355 aa16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 GNAT3A8MTJ3 354 aa16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 HOXC9P31274 260 aa16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 IBTKQ9P2D0 1353 aaPredicted RBP16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 PHRF1Q9P1Y6 1649 aaKnown RBP16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 REC8O95072 547 aa16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 CEBPAP49715 358 aaPredicted RBP16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 PDE1AP54750 535 aa16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 CCDC30Q5VVM6 783 aa16.57■□□□□ 0.24
SECISBP2-201ENST00000339901 MAP3K5Q99683 1374 aa16.56■□□□□ 0.24
SECISBP2-201ENST00000339901 LTN1O94822 1766 aa16.56■□□□□ 0.24
SECISBP2-201ENST00000339901 GRPEL1Q9HAV7 217 aa16.56■□□□□ 0.24
SECISBP2-201ENST00000339901 THEMISQ8N1K5 641 aaPredicted RBP16.56■□□□□ 0.24
SECISBP2-201ENST00000339901 STK31Q9BXU1 1019 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms